DN617595

Overview
NameDN617595
Unique NameDN617595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CHLL2 (Phosphoglycerate kinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=pgk PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = -1
Query:  300 KTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 554
            +T++WNGPMGVFE D+FA GT AIA+ +A+ +  G TTIIGGGDS AAV K GLAD+++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  313 RTVLWNGPMGVFEIDRFAEGTIAIAEAMADATAAGATTIIGGGDSAAAVAKAGLADQITHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 60/94 (63.83%), Postives = 75/94 (79.79%), Query Frame = -1
Query:  300 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 581
            ++++ +  +K ++WNGPMGVFE D FA GT+A+A+ LAE   K   ++IGGGDS AAVEK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  302 TYADVIKNSKLVVWNGPMGVFEIDLFAQGTKAVAEALAE--AKDTYSVIGGGDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVAALND 393          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_ROSS1 (Phosphoglycerate kinase OS=Roseiflexus sp. (strain RS-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.012e-28
Identity = 62/95 (65.26%), Postives = 76/95 (80.00%), Query Frame = -1
Query:  297 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 581
            +++E + T +T+IWNGPMGVFE   FA GT AIA+ +A   G    TI+GGGDSVAAVE++GLADK+ HISTGGGASLELLEG+ LPGV AL+DA
Sbjct:  304 AYTEIITTAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPGM---TIVGGGDSVAAVEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA 395          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_PELTS (Phosphoglycerate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pgk PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.240e-28
Identity = 62/93 (66.67%), Postives = 73/93 (78.49%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            F+EAL   +T++WNGPMGVFE D FA GTEAIA+ LAEL+     T+IGGGD+ AA +K G+A KM+HISTGGGASLE LEGK LPGV AL D
Sbjct:  303 FTEALRAARTVVWNGPMGVFEMDPFARGTEAIARTLAELNA---VTVIGGGDTAAAAKKAGVAGKMTHISTGGGASLEFLEGKQLPGVRALLD 392          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_LACSS (Phosphoglycerate kinase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=pgk PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.240e-28
Identity = 60/93 (64.52%), Postives = 71/93 (76.34%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            F   L   KT++WNGPMGVFE D FA GT AI + L  LSG   TTI+GGGDS AAV+K+G+ DK++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  313 FENVLKDAKTVVWNGPMGVFEMDNFAKGTLAIGEFLGNLSG--ATTIVGGGDSTAAVKKLGVGDKLTHISTGGGASLEYLEGKTLPGIAAISD 403          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_ACIBL (Phosphoglycerate kinase OS=Acidobacteria bacterium (strain Ellin345) GN=pgk PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.240e-28
Identity = 62/91 (68.13%), Postives = 71/91 (78.02%), Query Frame = -1
Query:  306 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 578
            FSE +   +TI+WNGPMGVFEFD FA GT AIAK +A     G T+I+GGGDSVAAV   G+ADK++HISTGGGASLE LEGK LPGV AL
Sbjct:  312 FSEEIAKARTIVWNGPMGVFEFDNFAKGTRAIAKAVA--GNSGATSIVGGGDSVAAVHDAGVADKITHISTGGGASLEFLEGKKLPGVEAL 400          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CLOTE (Phosphoglycerate kinase OS=Clostridium tetani GN=pgk PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            +S+ + + KT++WNGPMGVFEF+KFA GT  +AK +AE      TTIIGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  311 YSQEVQSAKTVVWNGPMGVFEFEKFAKGTIEVAKAMAESQA---TTIIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIAALND 400          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.843e-28
Identity = 60/93 (64.52%), Postives = 74/93 (79.57%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            +++ +  +K ++WNGPMGVFE D FA GT+AIA+ LAE   K   ++IGGGDS AAVEK GLAD+MSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  303 YADVIKNSKLVVWNGPMGVFEIDAFAKGTKAIAEALAE--AKDTYSVIGGGDSAAAVEKFGLADQMSHISTGGGASLEFMEGKELPGVTALND 393          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_THESQ (Phosphoglycerate kinase OS=Thermotoga sp. (strain RQ2) GN=pgk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.937e-28
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL DK SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  304 FKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CLOPS (Phosphoglycerate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.937e-28
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  307 YAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEADA---TTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
The following BLAST results are available for this feature:
BLAST of DN617595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CHLL23.072e-2868.24Phosphoglycerate kinase OS=Chlorobium limicola (st... [more]
PGK_BACSU3.072e-2863.83Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]
PGK_ROSS14.012e-2865.26Phosphoglycerate kinase OS=Roseiflexus sp. (strain... [more]
PGK_PELTS5.240e-2866.67Phosphoglycerate kinase OS=Pelotomaculum thermopro... [more]
PGK_LACSS5.240e-2864.52Phosphoglycerate kinase OS=Lactobacillus sakei sub... [more]
PGK_ACIBL5.240e-2868.13Phosphoglycerate kinase OS=Acidobacteria bacterium... [more]
PGK_CLOTE6.843e-2863.44Phosphoglycerate kinase OS=Clostridium tetani GN=p... [more]
PGK_BACP26.843e-2864.52Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_THESQ8.937e-2860.22Phosphoglycerate kinase OS=Thermotoga sp. (strain ... [more]
PGK_CLOPS8.937e-2865.59Phosphoglycerate kinase OS=Clostridium perfringens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617595 ID=DN617595; Name=DN617595; organism=Citrus sinensis; type=EST; length=581bp
GGATTCATGCATTATCTAACAATCATCAACGGCTCATTGTGATCAGAAAG
GAACAAGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTC
CAAAATGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGA
AAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATA
AAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACT
CTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCA
TCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAA
GCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAA
CCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACT
CCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGC
AGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGATGG
TTTTAGTAGTATCCAAAGCTTCACTGAATGA
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