DN617595

Overview
NameDN617595
Unique NameDN617595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:27..607. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_EXIS2 (Phosphoglycerate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            ++EA+  +K ++WNGPMGVFE DK+A GT+ +A+ LA+       +IIGGGDS AA EK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  304 YAEAIKASKLVVWNGPMGVFELDKYANGTKGVAQALAD---SDAYSIIGGGDSAAAAEKFGLADKMSHISTGGGASLEFMEGKALPGVEALND 393          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CLOD6 (Phosphoglycerate kinase OS=Clostridium difficile (strain 630) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 56/94 (59.57%), Postives = 75/94 (79.79%), Query Frame = -1
Query:  300 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 581
            +F + +  +KT++WNGPMGVFEF+ FA GT ++A+ +AEL+    TT+IGGGDS AAV ++G  DKM+H+STGGGASLE LEGK LPG+ ALD+
Sbjct:  308 NFVKTIKESKTVVWNGPMGVFEFENFANGTLSVARAMAELTD--ATTVIGGGDSAAAVNQLGFGDKMTHVSTGGGASLEFLEGKELPGIAALDN 399          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CHLPB (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.600e-27
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = -1
Query:  300 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 581
            +FS  +   KT++WNGPMGVFE + FA GT AIA+ LA+ + KG  +I+GGGDS AAV K GLA  ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  304 TFSREILAAKTVVWNGPMGVFEIEPFAKGTIAIAQALADATAKGTISIVGGGDSAAAVMKAGLASGITHISTGGGASLEFLEGKELPGITALND 397          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_MOOTA (Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 58/94 (61.70%), Postives = 76/94 (80.85%), Query Frame = -1
Query:  300 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 581
            +++ AL+  +T++WNGPMGVFE + FA GTEA+A+ +A + G    TI+GGGDSVAAVEK+G+A K+ HISTGGGASLE LEGK LPGV+AL +
Sbjct:  302 AYAGALEGARTVVWNGPMGVFEMEAFAHGTEAVARAVAAVDGM---TIVGGGDSVAAVEKMGVAGKIGHISTGGGASLEFLEGKALPGVVALTE 392          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_BACME (Phosphoglycerate kinase OS=Bacillus megaterium GN=pgk PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.396e-27
Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            +++ +  +K +IWNGPMGVFE D FA GT+A+A+ LAE +     ++IGGGDS AAVEK  LADKMSHISTGGGASLE +EGK LPGV+AL+D
Sbjct:  303 YADVIKNSKLVIWNGPMGVFELDAFANGTKAVAEALAEATD--TYSVIGGGDSAAAVEKFNLADKMSHISTGGGASLEFMEGKELPGVVALND 393          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CHLT3 (Phosphoglycerate kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.793e-27
Identity = 56/94 (59.57%), Postives = 71/94 (75.53%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F E +   KT+IWNGPMGVFE +KFA GT A+A+ LA+ + +G  T+IGGGDS AA+   GL D ++H+STGGGASLE LEGK LPG+ AL +A
Sbjct:  304 FREEVVNAKTVIWNGPMGVFEMEKFAKGTMAVAQALADATKQGAITVIGGGDSAAAIAVAGLEDSVTHVSTGGGASLEFLEGKELPGIAALSNA 397          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CHLPD (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.793e-27
Identity = 56/85 (65.88%), Postives = 67/85 (78.82%), Query Frame = -1
Query:  300 KTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 554
            +T++WNGPMGVFE D FA GT AIAK LAE +  G  TI+GGGDS AA+ K  L+D ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  313 RTVLWNGPMGVFEIDNFAEGTFAIAKALAEATSSGAITIVGGGDSAAAIAKAALSDSITHISTGGGASLEFLEGKALPGIEALND 397          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CHLCH (Phosphoglycerate kinase OS=Chlorobium chlorochromatii (strain CaD3) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.793e-27
Identity = 54/85 (63.53%), Postives = 70/85 (82.35%), Query Frame = -1
Query:  300 KTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 554
            +T++WNGPMGVFE D FA GT A+A+ LA+ + +G TTI+GGGDS AA+ K GLA +++HISTGGGASLE LEGK LPG+ AL++
Sbjct:  313 RTVLWNGPMGVFELDNFATGTIAVAQALADATAQGATTIVGGGDSAAAIAKAGLASEITHISTGGGASLEFLEGKELPGIAALNN 397          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.793e-27
Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            + + +  +K +IWNGPMGVFE D FA GT+A+A+ LA+   K   T+IGGGDS AAVEK GLA+KM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  303 YRDVILKSKLVIWNGPMGVFEMDAFAEGTKAVAQALAD--AKDTYTVIGGGDSAAAVEKFGLANKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_THEAB (Phosphoglycerate kinase OS=Thermosipho africanus (strain TCF52B) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.566e-27
Identity = 55/91 (60.44%), Postives = 70/91 (76.92%), Query Frame = -1
Query:  306 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 578
            F  ++   KTI+WNGPMGVFE + F+ GT+ +A  +AE + KG TTIIGGGDS AA+ K GL DK+SH+STGGGASLE LEGK LPG+ ++
Sbjct:  304 FRNSISGAKTIVWNGPMGVFEIEDFSNGTKEVAIAIAEETSKGATTIIGGGDSAAAIAKFGLKDKVSHVSTGGGASLEFLEGKELPGIASI 394          
The following BLAST results are available for this feature:
BLAST of DN617595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_EXIS22.600e-2763.44Phosphoglycerate kinase OS=Exiguobacterium sibiric... [more]
PGK_CLOD62.600e-2759.57Phosphoglycerate kinase OS=Clostridium difficile (... [more]
PGK_CHLPB2.600e-2761.70Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_MOOTA3.396e-2761.70Phosphoglycerate kinase OS=Moorella thermoacetica ... [more]
PGK_BACME3.396e-2763.44Phosphoglycerate kinase OS=Bacillus megaterium GN=... [more]
PGK_CHLT35.793e-2759.57Phosphoglycerate kinase OS=Chloroherpeton thalassi... [more]
PGK_CHLPD5.793e-2765.88Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_CHLCH5.793e-2763.53Phosphoglycerate kinase OS=Chlorobium chlorochroma... [more]
PGK_ANOFW5.793e-2763.44Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_THEAB7.566e-2760.44Phosphoglycerate kinase OS=Thermosipho africanus (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617595 ID=DN617595; Name=DN617595; organism=Citrus sinensis; type=EST; length=581bp
GGATTCATGCATTATCTAACAATCATCAACGGCTCATTGTGATCAGAAAG
GAACAAGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTC
CAAAATGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGA
AAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATA
AAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACT
CTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCA
TCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAA
GCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAA
CCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACT
CCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGC
AGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGATGG
TTTTAGTAGTATCCAAAGCTTCACTGAATGA
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