DN617590

Overview
NameDN617590
Unique NameDN617590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:965..1834. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: HXT15_YEAST (Hexose transporter HXT15 OS=Saccharomyces cerevisiae GN=HXT15 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11
Identity = 53/197 (26.90%), Postives = 88/197 (44.67%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFL-VSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV---CAFTV-AFVSLWVPETKGRSLEEIQFSF 868
            QL+G N   FY + IF + G++     +  LG V   +T +   ++DK GRR       + M A   +  SI         +D       G   +V     +  F+     + +++++E  P  +KS A S++T  NWL  +++     F   + +G     YG V   C   +  +V  ++PET G SLEEIQ  +
Sbjct:  332 QLTGENYFFFYGTTIFKSVGLTDGFETSIVLGTVNFFSTIIAVMVVDKIGRRKCLLFGAASMMACMVIFASIGVKCLYPHGQDGPSSKGAGNAMIVFTCFYIFCFATTWAPVAYIVVAESFPSKVKSKAMSISTAFNWLWQFLI----GFFTPFITGSIHFYYGYVFVGCLVAMFLYVFFFLPETIGLSLEEIQLLY 524          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR12_BOVIN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Bos taurus GN=SLC2A12 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11
Identity = 36/111 (32.43%), Postives = 67/111 (60.36%), Query Frame = -3
Query:  305 VSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 634
            V++ +   + L  LSL  L+  V +FS+G+G +PW+++SEI P  I+  A ++ +  NW ++ ++++T   + D         IY ++   ++ FV +++PETKG SLE+I
Sbjct:  454 VTDSADVPTFLKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFIYTVMSLASLVFVIVFIPETKGCSLEQI 564          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: YIR0_YEAST (Putative transporter-like protein YIL170W OS=Saccharomyces cerevisiae GN=YIL170W PE=5 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11
Identity = 51/196 (26.02%), Postives = 91/196 (46.43%), Query Frame = -3
Query:  305 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVS----IAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIV----CAFTVAFVSLWVPETKGRSLEEI 868
            QL+G N   +Y + IF + G+  S   +  +GVV   ++ +  + +++ GRR       + M   F + +       + +G   +D       G   +V  +  + SF+       +VI+SE  P+  KS   ++AT ANW+  ++++    F+    +G     YG V      F   +V  +VPETKG +LEE+
Sbjct:  222 QLTGDNYFFYYGTTIFKSVGLKDSFQTSIIIGVVNFFSSFIAVYTIERFGRRTCLLWGAASMLCCFAVFASVGVTKLWPQGSSHQDITSQG-AGNCMIVFTMFFIFSFATTWAGGCFVIVSETFPLRAKSRGMAIATAANWMWGFLISFFTPFI----TGAINFYYGYVFLGCLVFAYFYVFFFVPETKGLTLEEV 412          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11
Identity = 46/190 (24.21%), Postives = 84/190 (44.21%), Query Frame = -3
Query:  305 QLSGINGVLFYSSNIFANAGISS--SNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 868
            QL+GIN + FY+  +F   G  S  S ++    G+++++ T V+ + +D+ GRR         M  S   +     ++  V+           L +  +   V  F+   G + W++ SEI P+ I+S A ++    N   +++V      +L     G F  +         F+ L +PETK   +EE+
Sbjct:  294 QLTGINVITFYAPVLFQTLGFGSKASLLSAMVTGIIELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVALICIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHMKFGLFFFFAFFVVIMTIFIYLMLPETKNVPIEEM 483          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR12_MACFA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Macaca fascicularis GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11
Identity = 35/98 (35.71%), Postives = 61/98 (62.24%), Query Frame = -3
Query:  305 LSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 595
            LSL  L+  V +FS+G+G +PW+++SEI P  I+  A ++ +  NW ++ ++++T   + D         IY I+   ++ FV +++PETKG SLE+I
Sbjct:  467 LSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFIYTIMSLASLLFVVMFIPETKGCSLEQI 564          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR12_HUMAN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11
Identity = 35/98 (35.71%), Postives = 61/98 (62.24%), Query Frame = -3
Query:  305 LSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 595
            LSL  L+  V +FS+G+G +PW+++SEI P  I+  A ++ +  NW ++ ++++T   + D         IY I+   ++ FV +++PETKG SLE+I
Sbjct:  463 LSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDLIGLPWVCFIYTIMSLASLLFVVMFIPETKGCSLEQI 560          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 46/190 (24.21%), Postives = 85/190 (44.74%), Query Frame = -3
Query:  305 QLSGINGVLFYSSNIFANAGIS--SSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEI 868
            Q++GIN ++FY+  +F   G +  +S ++    G V VV+T V+ + +D+ GRR         M  S  +V     ++   +             L  +   V  F+   G + W++ SEI P+ I+    ++    N   ++++      +L     G F  +G + A    F+   +PETKG  +EE+
Sbjct:  297 QITGINVIMFYAPVLFKTLGFADDASLISAVITGAVNVVSTLVSIYAVDRYGRRILFLEGGIQMIVSQIVVGTLIGMKFGTTGSGTLTPATADWILAFICLYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFGLFYFFGGMVAVMTVFIYFLLPETKGVPIEEM 486          
The following BLAST results are available for this feature:
BLAST of DN617590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
HXT15_YEAST5.397e-1126.90Hexose transporter HXT15 OS=Saccharomyces cerevisi... [more]
GTR12_BOVIN5.397e-1132.43Solute carrier family 2, facilitated glucose trans... [more]
YIR0_YEAST7.049e-1126.02Putative transporter-like protein YIL170W OS=Sacch... [more]
STP4_ARATH7.049e-1124.21Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
GTR12_MACFA7.049e-1135.71Solute carrier family 2, facilitated glucose trans... [more]
GTR12_HUMAN7.049e-1135.71Solute carrier family 2, facilitated glucose trans... [more]
STP9_ARATH9.206e-1124.21Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617590 ID=DN617590; Name=DN617590; organism=Citrus sinensis; type=EST; length=870bp
TTTTTGAATTTATATGAATAACTCTTTTTATCCACAAAACTGGAGATAAT
TATTTACTATTACATAATGTTCCAGTGAAAAAGAGTAATTTATCCATTGT
TCTTTCCTTTTCCCCTTCAACAACACCACAAAGCAACTGTCGTAGACCGC
CCCTACAGATGATACAATGAACTATGGAGCAATGATGGAAGCAATTCGCA
CAAATAAAAGCGCATTGACATATACTTGGGAAGGATTAGGACACATGGGT
GGAGAAGCTCTTTATTACAAATGCAAGCCAACAATTTTATCTGAAGGAAA
ACTGAATTTCTTCCAGACTTCTTCCTTTGGTTTCAGGAACCCAGAGAGAC
ACAAAAGCAACAGTGAAAGCACACACTATCCCGTATATCAAGAAGGTGCC
TCCACTGCTCCAATCTAACAGAAAATTTGCAGTCATTGTGACAATCCACG
ATACCAGCCAGTTTGCCAACGTTGCAACACTGCCAGCAAGGCTCTTGATA
TTCACTGGAAGTATCTCGGACATTATAACCCAAGGAATAGCTCCAACTCC
CAAAGAGAATGAAATCACTACAGTCACAAGACCGACAAGCGACAATATCC
CCAATATGCTATAAAAGCGAGAATCTTCTGACACAAAACCCTCCAAAAAG
AATGCAATCGAAACAAGGAAAAAACTAGCAGCCATTCCAGATGATGATAT
TAAAAGAAGAAGCCTGCGGCCAGCTTTGTCCATCAACCATGTATTGACCC
CAGTGGCAACAACCTGAACAACCCCAAGTCCAAATGTAGCAACGTTACTT
GATGAAATCCCAGCGTTAGCAAAAATGTTACTGGAATAGAATAAAACACC
ATTGATGCCACTGAGTTGCT
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