DN617590

Overview
NameDN617590
Unique NameDN617590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:965..1834. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.850e-25
Identity = 66/196 (33.67%), Postives = 108/196 (55.10%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAG--ISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD-WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            Q+ G N VL+Y+  IF + G  +S++ +A  G+G+  V+ T +   +MDK  R+        GM  S F++SI     G     +       I+S++ L   +  FS   G + WV++ E+ P+NI+ L  S A++ NW  + IV++T   LLD + +G  F+ YGI+C  ++ FV   V ET+ RSLE+I+ + R
Sbjct:  255 QVMGCNTVLYYAPTIFTDVGFGVSAALLAHIGIGIFNVIVTAIAVAIMDKIDRKKIVNIGAVGMGISLFVMSIGMKFSGGSQTAA-------IISVIALTVYIAFFSATWGPVMWVMIGEVFPLNIRGLGNSFASVINWTANMIVSLTFPSLLDFFGTGSLFIGYGILCFASIWFVQKKVFETRNRSLEDIEATLR 443          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.577e-25
Identity = 67/193 (34.72%), Postives = 104/193 (53.89%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF  +G+     AT G GVV    T V+ +++++AGRR       +GMA    L++IA  L     +   + S L I+++ G V     F +G G IPW I++E+     +  A +VA L+NW  ++IV M   ++        F+I+ ++      F    VPETKGR+ +EI + FR
Sbjct:  282 QLSGINAVFYYSTSIFEKSGVEQPVYATIGSGVVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALTL----LDQMPWMSYLSIVAIFGFVAF---FEIGPGPIPWFIVAELFSQGPRPAAFAVAGLSNWTSNFIVGMGFQYIAQLCGSYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIAYRFR 467          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR8_MOUSE (Solute carrier family 2, facilitated glucose transporter member 8 OS=Mus musculus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.120e-24
Identity = 64/206 (31.07%), Postives = 109/206 (52.91%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGI-------------LSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSG+N ++FY+++IF  A    S++A+  +G++QV+ T V   +MD+AGRR         M  S       F L   +  +S    ++ I             L++  +   +  F++G G IPW++MSEI P+++K +A  +  L NW ++++VT   + +++     G F +    CA +V F    VPETKGR+LE++   F
Sbjct:  269 QLSGVNAIMFYANSIFEEAKFKDSSLASVTVGIIQVLFTAVAALIMDRAGRRLLLALSGVIMVFSMSAFGTYFKLTQSLPSNSSHVGLVPIAAEPVDVQVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWFMAFLVTKEFSSVMEMLRPYGAFWLTAAFCALSVLFTLTVVPETKGRTLEQVTAHF 474          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR8_HUMAN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=2 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.911e-24
Identity = 69/207 (33.33%), Postives = 107/207 (51.69%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSI--------------LGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD-WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSG+N V+FY+  IF  A    S++A+  +GV+QV+ T V   +MD+AGRR         M  S       F L      +S   +I              L  L++  +   +  F++G G IPW++MSEI P+++K +A  +  L NWL++++VT   + L++     G F +    C F+V F    VPETKG++LE+I   F
Sbjct:  268 QLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQITAHF 474          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR8_RAT (Solute carrier family 2, facilitated glucose transporter member 8 OS=Rattus norvegicus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.496e-24
Identity = 66/207 (31.88%), Postives = 107/207 (51.69%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAF--------------FLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD-WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSG+N ++FY++ IF  A    S++A+  +G++QV+ T V   +MD+AGR+         M  S       F               L    +E +  +  L  L++  +   +  F++G G IPW++MSEI P++IK +A  V  L NW ++++VT   N +++     G F +    C  +V F   +VPETKGR+LE+I   F
Sbjct:  269 QLSGVNAIMFYANTIFEEAKFKDSSLASVTVGIIQVLFTAVAALIMDRAGRKLLLALSGVIMVFSMSAFGTYFKLTQSGPSNSSHVGLLVPISAEPADVHLGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHIKGVATGVCVLTNWFMAFLVTKEFNSIMEILRPYGAFWLTAAFCILSVLFTLTFVPETKGRTLEQITAHF 475          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR4_MOUSE (Solute carrier family 2, facilitated glucose transporter member 4 OS=Mus musculus GN=Slc2a4 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.496e-24
Identity = 66/193 (34.20%), Postives = 103/193 (53.37%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF +AG+     AT G GVV  V T V+  L+++AGRR       +GM     L+++A  L   V         +  +S+V +   V  F +G G IPW I++E+     +  A +VA  +NW  ++IV M   ++ D      FL++ ++      F  L VPET+GR+ ++I  +FR
Sbjct:  299 QLSGINAVFYYSTSIFESAGVGQPAYATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPA-------MSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIVGMGFQYVADAMGPYVFLLFAVLLLGFFIFTFLKVPETRGRTFDQISAAFR 484          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR2_MOUSE (Solute carrier family 2, facilitated glucose transporter member 2 OS=Mus musculus GN=Slc2a2 PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 2.496e-24
Identity = 66/194 (34.02%), Postives = 105/194 (54.12%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIY-GIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            Q SGING+ +YS++IF  AGIS    AT G+G + ++ T V+  L++KAGRR        GM   FF     F   G V  D   ++ +  +S+  +   V  F +G G IPW +++E      +  A ++A  +NW+ ++++ +   ++ D+     F ++ G+V  FT+ F    VPETKG+S EEI   FR
Sbjct:  314 QFSGINGIFYYSTSIFQTAGISQPVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLT---GMIGMFFCT--IFMSVGLVLLDK--FAWMSYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPTALALAAFSNWVCNFVIALCFQYIADFLGPYVFFLFAGVVLVFTL-FTFFKVPETKGKSFEEIAAEFR 499          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR2_RAT (Solute carrier family 2, facilitated glucose transporter member 2 OS=Rattus norvegicus GN=Slc2a2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.257e-24
Identity = 66/194 (34.02%), Postives = 105/194 (54.12%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIY-GIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            Q SGING+ +YS++IF  AGIS    AT G+G + ++ T V+  L++KAGRR        GM   FF     F   G V  D   ++ +  +S+  +   V  F +G G IPW +++E      +  A ++A  +NW+ ++I+ +   ++ D+     F ++ G+V  FT+ F    VPETKG+S +EI   FR
Sbjct:  313 QFSGINGIFYYSTSIFQTAGISQPVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLA---GMIGMFFCA--VFMSLGLVLLDK--FTWMSYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPTALALAAFSNWVCNFIIALCFQYIADFLGPYVFFLFAGVVLVFTL-FTFFKVPETKGKSFDEIAAEFR 498          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.257e-24
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF  AG+     AT G G+V    T V+ +++++AGRR       +GMAA   L++IA  L     E   + S L I+++ G V     F +G G IPW I++E+     +  A +VA  +NW  ++IV M   ++        F+I+ ++      F    VPETKGR+ +EI   FR
Sbjct:  283 QLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAACAVLMTIALAL----LEQLPWMSYLSIVAIFGFVAF---FEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFR 468          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.560e-24
Identity = 66/193 (34.20%), Postives = 102/193 (52.85%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF  AG+     AT G GVV  V T V+  L+++AGRR       +GM     L+++A  L   V         +  +S+V +   V  F +G G IPW I++E+     +  A +VA  +NW  ++IV M   ++ D      FL++ ++      F  L VPET+GR+ ++I  +FR
Sbjct:  299 QLSGINAVFYYSTSIFELAGVEQPAYATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPS-------MSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIVGMGFQYVADAMGPYVFLLFAVLLLGFFIFTFLRVPETRGRTFDQISATFR 484          
The following BLAST results are available for this feature:
BLAST of DN617590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
XYLT_LACBR3.850e-2533.67D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
GTR1_CHICK8.577e-2534.72Solute carrier family 2, facilitated glucose trans... [more]
GTR8_MOUSE1.120e-2431.07Solute carrier family 2, facilitated glucose trans... [more]
GTR8_HUMAN1.911e-2433.33Solute carrier family 2, facilitated glucose trans... [more]
GTR8_RAT2.496e-2431.88Solute carrier family 2, facilitated glucose trans... [more]
GTR4_MOUSE2.496e-2434.20Solute carrier family 2, facilitated glucose trans... [more]
GTR2_MOUSE2.496e-2434.02Solute carrier family 2, facilitated glucose trans... [more]
GTR2_RAT4.257e-2434.02Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RABIT4.257e-2435.23Solute carrier family 2, facilitated glucose trans... [more]
GTR4_RAT5.560e-2434.20Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617590 ID=DN617590; Name=DN617590; organism=Citrus sinensis; type=EST; length=870bp
TTTTTGAATTTATATGAATAACTCTTTTTATCCACAAAACTGGAGATAAT
TATTTACTATTACATAATGTTCCAGTGAAAAAGAGTAATTTATCCATTGT
TCTTTCCTTTTCCCCTTCAACAACACCACAAAGCAACTGTCGTAGACCGC
CCCTACAGATGATACAATGAACTATGGAGCAATGATGGAAGCAATTCGCA
CAAATAAAAGCGCATTGACATATACTTGGGAAGGATTAGGACACATGGGT
GGAGAAGCTCTTTATTACAAATGCAAGCCAACAATTTTATCTGAAGGAAA
ACTGAATTTCTTCCAGACTTCTTCCTTTGGTTTCAGGAACCCAGAGAGAC
ACAAAAGCAACAGTGAAAGCACACACTATCCCGTATATCAAGAAGGTGCC
TCCACTGCTCCAATCTAACAGAAAATTTGCAGTCATTGTGACAATCCACG
ATACCAGCCAGTTTGCCAACGTTGCAACACTGCCAGCAAGGCTCTTGATA
TTCACTGGAAGTATCTCGGACATTATAACCCAAGGAATAGCTCCAACTCC
CAAAGAGAATGAAATCACTACAGTCACAAGACCGACAAGCGACAATATCC
CCAATATGCTATAAAAGCGAGAATCTTCTGACACAAAACCCTCCAAAAAG
AATGCAATCGAAACAAGGAAAAAACTAGCAGCCATTCCAGATGATGATAT
TAAAAGAAGAAGCCTGCGGCCAGCTTTGTCCATCAACCATGTATTGACCC
CAGTGGCAACAACCTGAACAACCCCAAGTCCAAATGTAGCAACGTTACTT
GATGAAATCCCAGCGTTAGCAAAAATGTTACTGGAATAGAATAAAACACC
ATTGATGCCACTGAGTTGCT
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