DN617590

Overview
NameDN617590
Unique NameDN617590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR8_BOVIN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Bos taurus GN=SLC2A8 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.483e-24
Identity = 69/207 (33.33%), Postives = 106/207 (51.21%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSL------VGLVTVVIS--------FSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD-WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSG+N V+FY+  IF  A    S++A+  +GV+QV+ T     +MD+AGRR         M  S       F L      +S    +  ++S+      VGL  + +         F++G G IPW++MSEI P+++K +A  V  L NW ++++VT   + L++     G F +    C F V F    VPETKG++LE+I   F
Sbjct:  269 QLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTATAALIMDRAGRRLLLTLSGVVMVFSTSAFGTYFKLTEGGPSNSSHVDLPALVSMEAADTNVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGVCVLTNWFMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFGVLFTLACVPETKGKTLEQITAHF 475          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR4_BOVIN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Bos taurus GN=SLC2A4 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.239e-23
Identity = 64/192 (33.33%), Postives = 102/192 (53.12%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSGIN V +YS++IF +AG+     AT G GVV  V T V+ +L+++AGRR       +GM     L+++A  L   V         +  +S+V +   V  F +G G IPW I++E+     +  A +VA  +NW  ++I+ M   ++ D      FL++ ++      F  L VPET+GR+ ++I   F
Sbjct:  299 QLSGINAVFYYSTSIFESAGVEKPAYATIGAGVVNTVFTLVSVFLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERV-------PAMSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIIGMGFQYVADAMGPYVFLLFAVLLLGFFIFTFLKVPETRGRTFDQISAVF 483          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.239e-23
Identity = 63/192 (32.81%), Postives = 99/192 (51.56%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            Q SGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA     ++I+  L+         Y  +  + +V ++  V  F +G G IPW I++E+     +  A +VA  +NW  +++V M       +     F+I+     F + F S  VPETKGR+ E+I  +F
Sbjct:  281 QFSGINAVFYYSTGIFQDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMTISLLLKDE-------YEAMSFVCIVAILVYVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGMFFPSAAAYLGAYVFIIFAAFLVFFLIFTSFKVPETKGRTFEDITRAF 465          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.239e-23
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF  AG+     AT G G+V    T V+ +++++AGRR       +GMA    L++IA  L     E   + S L I+++ G V     F +G G IPW I++E+     +  A +VA  +NW  ++IV M   ++        F+I+ ++      F    VPETKGR+ +EI   FR
Sbjct:  283 QLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL----LEQLPWMSYLSIVAIFGFVAF---FEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFR 468          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.239e-23
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF  AG+     AT G G+V    T V+ +++++AGRR       +GMA    L++IA  L     E   + S L I+++ G V     F +G G IPW I++E+     +  A +VA  +NW  ++IV M   ++        F+I+ ++      F    VPETKGR+ +EI   FR
Sbjct:  283 QLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALAL----LEQLPWMSYLSIVAIFGFVAF---FEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFR 468          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR1_SHEEP (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Ovis aries GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.618e-23
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF  AG+     AT G G+V    T V+ +++++AGRR       +GMA    L++IA  L     E   + S L I+++ G V     F +G G IPW I++E+     +  A +VA  +NW  ++IV M   ++        F+I+ ++      F    VPETKGR+ +EI   FR
Sbjct:  181 QLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL----LEQLPWMSYLSIVAIFGFVAF---FEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFR 366          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR1_PIG (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Sus scrofa GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.618e-23
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF  AG+     AT G G+V    T V+ +++++AGRR       +GMA    L++IA  L     E   + S L I+++ G V     F +G G IPW I++E+     +  A +VA  +NW  ++IV M   ++        F+I+ ++      F    VPETKGR+ +EI   FR
Sbjct:  242 QLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL----LEQLPWMSYLSIVAIFGFVAF---FEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFR 427          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.113e-23
Identity = 66/192 (34.38%), Postives = 111/192 (57.81%), Query Frame = -3
Query:  296 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTM-TANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFS 868
            QL+GIN V++YS+++F +AGI S   A+  +G   V  T V + LMDK GR+        GMA S  L+S++F  +   +     YS  G L++VG V  V+SFSLG G +P +++ EI    I++ A +++   +W+ ++++ +   + +  +     +L +  VC   V +++  V ETKGRSLEEI+ +
Sbjct:  357 QLAGINAVVYYSTSVFRSAGIQSDVAASALVGASNVFGTAVASSLMDKMGRKSLLLTSFGGMALSMLLLSLSFTWKALAA-----YS--GTLAVVGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVTKFGISSVYLGFAGVCVLAVLYIAGNVVETKGRSLEEIELA 541          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR1_MOUSE (Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus GN=Slc2a1 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF  AG+     AT G G+V    T V+ +++++AGRR       +GMA    L++IA  L     E   + S L I+++ G V     F +G G IPW I++E+     +  A +VA  +NW  ++IV M   ++        F+I+ ++      F    VPETKGR+ +EI   FR
Sbjct:  283 QLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL----LERLPWMSYLSIVAIFGFVAF---FEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFR 468          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR1_BOVIN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Bos taurus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QLSGIN V +YS++IF  AG+     AT G G+V    T V+ +++++AGRR       +GMA    L++IA  L     E   + S L I+++ G V     F +G G IPW I++E+     +  A +VA  +NW  ++IV M   ++        F+I+ ++      F    VPETKGR+ +EI   FR
Sbjct:  283 QLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALAL----LERLPWMSYLSIVAIFGFVAF---FEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFR 468          
The following BLAST results are available for this feature:
BLAST of DN617590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
GTR8_BOVIN9.483e-2433.33Solute carrier family 2, facilitated glucose trans... [more]
GTR4_BOVIN1.239e-2333.33Solute carrier family 2, facilitated glucose trans... [more]
GTR3_RAT1.239e-2332.81Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT1.239e-2334.72Solute carrier family 2, facilitated glucose trans... [more]
GTR1_HUMAN1.239e-2334.72Solute carrier family 2, facilitated glucose trans... [more]
GTR1_SHEEP1.618e-2334.72Solute carrier family 2, facilitated glucose trans... [more]
GTR1_PIG1.618e-2334.72Solute carrier family 2, facilitated glucose trans... [more]
PLST4_ARATH2.113e-2334.38Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
GTR1_MOUSE2.759e-2334.72Solute carrier family 2, facilitated glucose trans... [more]
GTR1_BOVIN2.759e-2334.72Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617590 ID=DN617590; Name=DN617590; organism=Citrus sinensis; type=EST; length=870bp
TTTTTGAATTTATATGAATAACTCTTTTTATCCACAAAACTGGAGATAAT
TATTTACTATTACATAATGTTCCAGTGAAAAAGAGTAATTTATCCATTGT
TCTTTCCTTTTCCCCTTCAACAACACCACAAAGCAACTGTCGTAGACCGC
CCCTACAGATGATACAATGAACTATGGAGCAATGATGGAAGCAATTCGCA
CAAATAAAAGCGCATTGACATATACTTGGGAAGGATTAGGACACATGGGT
GGAGAAGCTCTTTATTACAAATGCAAGCCAACAATTTTATCTGAAGGAAA
ACTGAATTTCTTCCAGACTTCTTCCTTTGGTTTCAGGAACCCAGAGAGAC
ACAAAAGCAACAGTGAAAGCACACACTATCCCGTATATCAAGAAGGTGCC
TCCACTGCTCCAATCTAACAGAAAATTTGCAGTCATTGTGACAATCCACG
ATACCAGCCAGTTTGCCAACGTTGCAACACTGCCAGCAAGGCTCTTGATA
TTCACTGGAAGTATCTCGGACATTATAACCCAAGGAATAGCTCCAACTCC
CAAAGAGAATGAAATCACTACAGTCACAAGACCGACAAGCGACAATATCC
CCAATATGCTATAAAAGCGAGAATCTTCTGACACAAAACCCTCCAAAAAG
AATGCAATCGAAACAAGGAAAAAACTAGCAGCCATTCCAGATGATGATAT
TAAAAGAAGAAGCCTGCGGCCAGCTTTGTCCATCAACCATGTATTGACCC
CAGTGGCAACAACCTGAACAACCCCAAGTCCAAATGTAGCAACGTTACTT
GATGAAATCCCAGCGTTAGCAAAAATGTTACTGGAATAGAATAAAACACC
ATTGATGCCACTGAGTTGCT
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