DN617590

Overview
NameDN617590
Unique NameDN617590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:965..1834. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR3_MOUSE (Solute carrier family 2, facilitated glucose transporter member 3 OS=Mus musculus GN=Slc2a3 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.604e-23
Identity = 64/192 (33.33%), Postives = 100/192 (52.08%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA     ++I+  L+    +D   Y  +  + +V ++  V  F +G G IPW I++E+     +  A +VA   NW  +++V M       +     F+I+     F + F    VPETKGR+ E+I  +F
Sbjct:  281 QLSGINAVFYYSTGIFKDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMTISLLLK----DD---YEAMSFVCIVAILIYVAFFEIGPGPIPWFIVAELFSQGPRPAAIAVAGCCNWTSNFLVGMLFPSAAAYLGAYVFIIFAAFLIFFLIFTFFKVPETKGRTFEDIARAF 465          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.147e-23
Identity = 63/192 (32.81%), Postives = 101/192 (52.60%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSGIN V +YS++IF  AG+     AT G GVV  V T V+  L+++AGRR       +GM     L+++A  L   V         +  +S+V +   V  F +G G IPW I++E+     +  A +VA  +NW  ++I+ M   ++ +      FL++ ++      F  L VPET+GR+ ++I  +F
Sbjct:  299 QLSGINAVFYYSTSIFETAGVGQPAYATIGAGVVNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERV-------PAMSYVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTSNFIIGMGFQYVAEAMGPYVFLLFAVLLLGFFIFTFLRVPETRGRTFDQISAAF 483          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.336e-22
Identity = 59/193 (30.57%), Postives = 101/193 (52.33%), Query Frame = -3
Query:  302 QLSGINGVLFYSSNIFANAGISSSNVATFG---LGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWS-SGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQ 868
            Q +GIN V++YS  I   AG  S+ +A F    +  +    T V  + +D  GR+        G+  S  ++S++FF +   S D   Y   G L+++GL   ++ F+ G+G +PW + SEI P   + + G ++   NW+ + IV  T   + + + +G TFLI   +    V FV ++VPET+G +  E++
Sbjct:  287 QFTGINTVMYYSPTIVQMAGFHSNQLALFLSLIVAAMNAAGTVVGIYFIDHCGRKKLALSSLFGVIISLLILSVSFFKQSETSSDGGLY---GWLAVLGLALYIVFFAPGMGPVPWTVNSEIYPQQYRGICGGMSATVNWISNLIVAQTFLTIAEAAGTGMTFLILAGIAVLAVIFVIVFVPETQGLTFSEVE 476          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR3_BOVIN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Bos taurus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.984e-22
Identity = 70/200 (35.00%), Postives = 103/200 (51.50%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFL--LDWSSGGTFLIYGIVCAFTVAFVSLW------VPETKGRSLEEIQFSF 868
            QLSGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA    L++I+  L+         YS +  + +  ++  V  F +G G IPW I++E+     +  A +VA  +NW        T+NFL  L + S   +L   +   FTV  V  W      VPET+GR+ EEI  +F
Sbjct:  281 QLSGINAVFYYSTGIFKDAGVQEPVYATIGAGVVNTIFTVVSVFLVERAGRRTLHLIGLGGMAFCSILMTISLLLKD-------NYSWMSFICIGAILVFVAFFEIGPGPIPWFIVAELFGQGPRPAAMAVAGCSNW--------TSNFLVGLLFPSAAFYLGAYVFIVFTVFLVIFWVFTFFKVPETRGRTFEEITRAF 465          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: PLST3_ARATH (Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.204e-22
Identity = 69/193 (35.75%), Postives = 110/193 (56.99%), Query Frame = -3
Query:  296 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFL--IYGIVCAFTVAFVSLWVPETKGRSLEEIQFS 868
            QLSGIN V ++SS +F  AG+ S++ A   +GV  ++ + V   LMDK GR+       +GMA S  L +IA+      S  S F ++   LS+ G++  V+SF+ G G +P +++SEI P  +++ A +V    +W++++ V +    +L+   G   L  I+G  C   V FV   V ETKG+SL+EI+ S
Sbjct:  306 QLSGINAVFYFSSTVFKKAGVPSAS-ANICVGVCNLLGSTVAVVLMDKLGRKVLLIGSFAGMAVSLGLQAIAY-----TSLPSPFGTLF--LSVGGMLLFVLSFATGAGPVPSLLLSEICPGRLRATALAVCLAVHWVINFFVGLLFLRMLE-QLGSVLLNAIFGFFCVVAVIFVQKNVVETKGKSLQEIEIS 489          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR3_SHEEP (Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.204e-22
Identity = 61/192 (31.77%), Postives = 99/192 (51.56%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA    L++I+  L+         YS +  + +  ++  V  F +G G IPW I++E+     +  A +VA  +NW  +++V +       +     F+++ +       F    VPET+GR+ EEI  +F
Sbjct:  281 QLSGINAVFYYSTGIFKDAGVQEPVYATIGAGVVNTIFTVVSVFLVERAGRRTLHLIGLGGMAFCSILMTISLLLKD-------NYSWMSFICIGAILVFVAFFEIGPGPIPWFIVAELFGQGPRPAAMAVAGCSNWTSNFLVGLLFPSATFYLGAYVFIVFTVFLVIFWVFTFFKVPETRGRTFEEITRAF 465          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR3_CHICK (Solute carrier family 2, facilitated glucose transporter member 3 OS=Gallus gallus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.204e-22
Identity = 68/192 (35.42%), Postives = 98/192 (51.04%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSGIN V +YS+ IF  AGI+    AT G GVV  V T V+ +L+++AGRR        GMA    +++IA  L+    +  R+ SI+     V L      F +G G IPW I++E+     +  A +VA  +NW  +++V M   +         FLI+ +       F    VPETKGR+ E+I   F
Sbjct:  282 QLSGINAVFYYSTGIFERAGITQPVYATIGAGVVNTVFTVVSLFLVERAGRRTLHLVGLGGMAVCAAVMTIALALK---EKWIRYISIVATFGFVAL------FEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGMLFPYAEKLCGPYVFLIFLVFLLIFFIFTYFKVPETKGRTFEDISRGF 464          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.514e-21
Identity = 64/193 (33.16%), Postives = 102/193 (52.85%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIY-GIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA    L++I+  L+         Y+ +  + +  ++  V  F +G G IPW I++E+     +  A +VA  +NW  +++V +       +     F+I+ G +  F V F    VPET+GR+ EEI  +F
Sbjct:  281 QLSGINAVFYYSTGIFKDAGVEEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSILMTISLLLKD-------NYNWMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAFYLGAYVFIIFTGFLIVFLV-FTFFKVPETRGRTFEEITRAF 465          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.753e-21
Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIY-GIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA    L++++  L+         Y+ +  + +  ++  V  F +G G IPW I++E+     +  A +VA  +NW  +++V +       +     F+I+ G +  F +AF    VPET+GR+ E+I  +F
Sbjct:  281 QLSGINAVFYYSTGIFKDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKD-------NYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLGAYVFIIFTGFLITF-LAFTFFKVPETRGRTFEDITRAF 465          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.753e-21
Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIY-GIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            QLSGIN V +YS+ IF +AG+     AT G GVV  + T V+ +L+++AGRR        GMA    L++++  L+         Y+ +  + +  ++  V  F +G G IPW I++E+     +  A +VA  +NW  +++V +       +     F+I+ G +  F +AF    VPET+GR+ E+I  +F
Sbjct:  281 QLSGINAVFYYSTGIFKDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKD-------NYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLGAYVFIIFTGFLITF-LAFTFFKVPETRGRTFEDITRAF 465          
The following BLAST results are available for this feature:
BLAST of DN617590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
GTR3_MOUSE3.604e-2333.33Solute carrier family 2, facilitated glucose trans... [more]
GTR4_HUMAN6.147e-2332.81Solute carrier family 2, facilitated glucose trans... [more]
INT1_ARATH2.336e-2230.57Probable inositol transporter 1 OS=Arabidopsis tha... [more]
GTR3_BOVIN3.984e-2235.00Solute carrier family 2, facilitated glucose trans... [more]
PLST3_ARATH5.204e-2235.75Probable plastidic glucose transporter 3 OS=Arabid... [more]
GTR3_SHEEP5.204e-2231.77Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CHICK5.204e-2235.42Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA1.514e-2133.16Solute carrier family 2, facilitated glucose trans... [more]
GTR3_PONAB5.753e-2132.12Solute carrier family 2, facilitated glucose trans... [more]
GTR3_HUMAN5.753e-2132.12Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617590 ID=DN617590; Name=DN617590; organism=Citrus sinensis; type=EST; length=870bp
TTTTTGAATTTATATGAATAACTCTTTTTATCCACAAAACTGGAGATAAT
TATTTACTATTACATAATGTTCCAGTGAAAAAGAGTAATTTATCCATTGT
TCTTTCCTTTTCCCCTTCAACAACACCACAAAGCAACTGTCGTAGACCGC
CCCTACAGATGATACAATGAACTATGGAGCAATGATGGAAGCAATTCGCA
CAAATAAAAGCGCATTGACATATACTTGGGAAGGATTAGGACACATGGGT
GGAGAAGCTCTTTATTACAAATGCAAGCCAACAATTTTATCTGAAGGAAA
ACTGAATTTCTTCCAGACTTCTTCCTTTGGTTTCAGGAACCCAGAGAGAC
ACAAAAGCAACAGTGAAAGCACACACTATCCCGTATATCAAGAAGGTGCC
TCCACTGCTCCAATCTAACAGAAAATTTGCAGTCATTGTGACAATCCACG
ATACCAGCCAGTTTGCCAACGTTGCAACACTGCCAGCAAGGCTCTTGATA
TTCACTGGAAGTATCTCGGACATTATAACCCAAGGAATAGCTCCAACTCC
CAAAGAGAATGAAATCACTACAGTCACAAGACCGACAAGCGACAATATCC
CCAATATGCTATAAAAGCGAGAATCTTCTGACACAAAACCCTCCAAAAAG
AATGCAATCGAAACAAGGAAAAAACTAGCAGCCATTCCAGATGATGATAT
TAAAAGAAGAAGCCTGCGGCCAGCTTTGTCCATCAACCATGTATTGACCC
CAGTGGCAACAACCTGAACAACCCCAAGTCCAAATGTAGCAACGTTACTT
GATGAAATCCCAGCGTTAGCAAAAATGTTACTGGAATAGAATAAAACACC
ATTGATGCCACTGAGTTGCT
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