DN617590

Overview
NameDN617590
Unique NameDN617590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:965..1834. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: GLF_ZYMMO (Glucose facilitated diffusion protein OS=Zymomonas mobilis GN=glf PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.200e-18
Identity = 59/206 (28.64%), Postives = 102/206 (49.51%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSN--VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLL-----------DWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            QL GIN VL+Y+  +F N G  +    + T  +GVV  + T + + ++D+ GR+        GMAA   ++   F+           + + G+L L  ++  +  F +  G + WV++SE+ P +IK  A  +A    WL + +V    NFL             ++ G ++L++  +       V+ +VPETKGRSL+EI+  +R
Sbjct:  280 QLVGINAVLYYAPQMFQNLGFGADTALLQTISIGVVNFIFTMIASRVVDRFGRKPLLIWGALGMAAMMAVLGCCFW-----------FKVGGVLPLASVLLYIAVFGMSWGPVCWVVLSEMFPSSIKGAAMPIAVTGQWLANILV----NFLFKVADGSPALNQTFNHGFSYLVFAALSILGGLIVARFVPETKGRSLDEIEEMWR 470          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: XYLE_ECOLI (D-xylose-proton symporter OS=Escherichia coli (strain K12) GN=xylE PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.567e-18
Identity = 58/198 (29.29%), Postives = 103/198 (52.02%), Query Frame = -3
Query:  302 QLSGINGVLFYSSNIFANAGISS--SNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-------ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQ 868
            Q  GIN VL+Y+  +F   G S+  + + T  +GV+ +  T +    +DK GR+        GMA   F +  AF+ +             GI++L+ ++  V +F++  G + WV++SEI P  I+  A ++A  A WL ++ V+ T       +  +  + +G ++ IYG +      F+  +VPETKG++LEE++
Sbjct:  289 QFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA-----------PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELE 475          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: XYLE_ECO57 (D-xylose-proton symporter OS=Escherichia coli O157:H7 GN=xylE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.567e-18
Identity = 58/198 (29.29%), Postives = 103/198 (52.02%), Query Frame = -3
Query:  302 QLSGINGVLFYSSNIFANAGISS--SNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-------ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQ 868
            Q  GIN VL+Y+  +F   G S+  + + T  +GV+ +  T +    +DK GR+        GMA   F +  AF+ +             GI++L+ ++  V +F++  G + WV++SEI P  I+  A ++A  A WL ++ V+ T       +  +  + +G ++ IYG +      F+  +VPETKG++LEE++
Sbjct:  289 QFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA-----------PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELE 475          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.567e-18
Identity = 63/195 (32.31%), Postives = 100/195 (51.28%), Query Frame = -3
Query:  290 SGINGVLFYSSNIFANAGISSSN---VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD-WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 862
            SGI  VL Y   IF  AGI++ +   + T G+G+++       T L+DK GRR        GM  +  L  + F L    +   +    L +LS+V   + V  FS+G+G I WV  SE+ P+ +++   S+    N +++  V+M+   L    ++GG F ++  V A    F    +PETKG+SLEEI+  F+
Sbjct:  289 SGIEAVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIA--LTMLGFGLTMAQNAGGKLAWAL-VLSIVAAYSFVAFFSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWNFFFFLLPETKGKSLEEIEALFQ 480          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: ARAE_BACSU (Arabinose-proton symporter OS=Bacillus subtilis GN=araE PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.567e-18
Identity = 57/192 (29.69%), Postives = 97/192 (50.52%), Query Frame = -3
Query:  302 QLSGINGVLFYSSNIFANAGISSSN--VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLD-WSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQ 868
            Q+ G+N + +Y   IF   G   +   V T  +GVV+V+ T +   L+DK GR+       + MA    L+  +F+ E             GI+ +V ++  V +F + VG I W+++SEI P ++++ A  +AT+  W  +W +      ++D +    TF I+ ++      FV    PETK +SLEEI+
Sbjct:  278 QVIGMNAITYYGPEIFKMMGFGQNAGFVTTCIVGVVEVIFTVIAVLLIDKVGRKKLMSIGSAFMAIFMILIGTSFYFE----------LTSGIMMIVLILGFVAAFCVSVGPITWIMISEIFPNHLRARAAGIATIFLWGANWAIGQFVPMMIDSFGLAYTFWIFAVINILCFLFVVTICPETKNKSLEEIE 459          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.559e-18
Identity = 55/196 (28.06%), Postives = 102/196 (52.04%), Query Frame = -3
Query:  293 QLSGINGVLFYSSNIFANAGISSSN---VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSF 868
            Q SGI+ V+ +S  IF  AG+ + +   +AT  +GVV+     V T+L+D+ GRR        GM  S   +  +  +   + +  +      ++++  ++T V +FS+G G I WV  SEI P+ ++S   S+  + N + S +++++        ++GG F ++G +      F   ++PET+GR LE++   F
Sbjct:  306 QASGIDAVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTI---IDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAFYLFGGIATVAWVFFYTFLPETQGRMLEDMDELF 498          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: YFIG_BACSU (Putative metabolite transport protein yfiG OS=Bacillus subtilis GN=yfiG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.954e-18
Identity = 55/198 (27.78%), Postives = 98/198 (49.49%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSN--VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSI-AFFLEGFVSEDSRFYSILGILSLVGLVTVVISFS-LGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDW-SSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            Q++G+N +++Y + I   AG  +    +     GV+ V+A     WL+ K  RR        G   +  L+ I +  LEG  +     Y +L       L  + ++F    +  + W+++SEI P++++ L   ++T   W  ++++  T   LL+      TF I+  +    + FV  +VPETKGRSLE+++ SFR
Sbjct:  276 QITGVNSIMYYGTEILREAGFQTEAALIGNIANGVISVIAVIFGIWLLGKVRRRPMLIIGQIGTMTALLLIGILSIVLEGTPALP---YVVLS------LTILFLAFQQTAISTVTWLMLSEIFPMHVRGLGMGISTFCLWTANFLIGFTFPILLNHIGMSATFFIFVAMNILAILFVKKYVPETKGRSLEQLEHSFR 464          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.776e-18
Identity = 64/194 (32.99%), Postives = 103/194 (53.09%), Query Frame = -3
Query:  296 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLLDWSSGGTFLIYGI---VCAFTVAFVSLWVPETKGRSLEEIQFS 868
            QLSGIN V ++SS +F +AG+ S ++    +GV  ++ + +   LMDK GR+        GMAA+  L        G  S     +S L  LS+ G +  V++F+LG G +P +++ EI P  I++ A +     +W++++ V +   FL      G  L+Y +    C   V FV   V ETKG++L+EI+ S
Sbjct:  305 QLSGINAVFYFSSTVFKSAGVPS-DLGNIFVGVSNLLGSVIAMVLMDKVGRKLLLLWSFIGMAAAMALQV------GATSSYLPHFSAL-CLSVGGTLVFVLTFALGAGPVPGLLLPEIFPSRIRAKAMAFCMSVHWVINFFVGLL--FLRLLEKLGPRLLYSMFSTFCLMAVMFVKRNVIETKGKTLQEIEIS 488          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.016e-17
Identity = 58/198 (29.29%), Postives = 100/198 (50.51%), Query Frame = -3
Query:  290 QLSGINGVLFYSSNIFANAGISSSN--VATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSI-AFFLEGFVSEDSRFYSILGILSLVGLVTVVISFSLG-VGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMTANFLL-DWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQFSFR 868
            Q++G+N +++Y + I  N+G  +    +     GV+ V+AT V  WL+ + GRR        G   +  L+ I +  LEG     +  Y +L       L    ++F  G +  + W+++SEI P+ ++ L   V     W+V++ V+ T   LL       TF I+  +   +V FV  ++PETKG SLE+++ +FR
Sbjct:  268 QITGVNSIMYYGTEILRNSGFQTEAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLLIGIFSLVLEG---SPALPYVVLS------LTVTFLAFQQGAISPVTWLMLSEIFPLRLRGLGMGVTVFCLWMVNFAVSFTFPILLAAIGLSTTFFIFVGLGICSVLFVKRFLPETKGLSLEQLEENFR 456          
BLAST of DN617590 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.262e-17
Identity = 55/196 (28.06%), Postives = 91/196 (46.43%), Query Frame = -3
Query:  302 QLSGINGVLFYSSNIFANAGISSSNVATFGLGVVQVVATGVNTWLMDKAGRRXXXXXXXSGMAASFFLVSIAFFLEGFVSED------SRFYSILGILSLVGLVTVVISFSLGVGAIPWVIMSEILPVNIKSLAGSVATLANWLVSWIVTMT-ANFLLDWSSGGTFLIYGIVCAFTVAFVSLWVPETKGRSLEEIQ 868
            Q +G N ++++S  IF   G  +S+  +  +     + T V  + +DK GRR        GM  +  + SIAF   G   +       S  +S  GI+ +V ++     ++LG+G +PW   SE+ P N++ +  S AT  NW  S ++  T    L + +  GTF  +  +   +  F     PE  G  LEE+Q
Sbjct:  349 QFTGWNSLMYFSGTIFETVGFKNSSAVSIIVSGTNFIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGIGTVPWQ-QSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAFFAGLSCLSTIFCYFCYPELSGLELEEVQ 543          
The following BLAST results are available for this feature:
BLAST of DN617590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
GLF_ZYMMO1.200e-1828.64Glucose facilitated diffusion protein OS=Zymomonas... [more]
XYLE_ECOLI1.567e-1829.29D-xylose-proton symporter OS=Escherichia coli (str... [more]
XYLE_ECO571.567e-1829.29D-xylose-proton symporter OS=Escherichia coli O157... [more]
PLT6_ARATH1.567e-1832.31Probable polyol transporter 6 OS=Arabidopsis thali... [more]
ARAE_BACSU1.567e-1829.69Arabinose-proton symporter OS=Bacillus subtilis GN... [more]
PLT5_ARATH4.559e-1828.06Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
YFIG_BACSU5.954e-1827.78Putative metabolite transport protein yfiG OS=Baci... [more]
PLST2_ARATH7.776e-1832.99Probable plastidic glucose transporter 2 OS=Arabid... [more]
IOLT_BACSU1.016e-1729.29Major myo-inositol transporter iolT OS=Bacillus su... [more]
ITR1_YEAST2.262e-1728.06Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617590 ID=DN617590; Name=DN617590; organism=Citrus sinensis; type=EST; length=870bp
TTTTTGAATTTATATGAATAACTCTTTTTATCCACAAAACTGGAGATAAT
TATTTACTATTACATAATGTTCCAGTGAAAAAGAGTAATTTATCCATTGT
TCTTTCCTTTTCCCCTTCAACAACACCACAAAGCAACTGTCGTAGACCGC
CCCTACAGATGATACAATGAACTATGGAGCAATGATGGAAGCAATTCGCA
CAAATAAAAGCGCATTGACATATACTTGGGAAGGATTAGGACACATGGGT
GGAGAAGCTCTTTATTACAAATGCAAGCCAACAATTTTATCTGAAGGAAA
ACTGAATTTCTTCCAGACTTCTTCCTTTGGTTTCAGGAACCCAGAGAGAC
ACAAAAGCAACAGTGAAAGCACACACTATCCCGTATATCAAGAAGGTGCC
TCCACTGCTCCAATCTAACAGAAAATTTGCAGTCATTGTGACAATCCACG
ATACCAGCCAGTTTGCCAACGTTGCAACACTGCCAGCAAGGCTCTTGATA
TTCACTGGAAGTATCTCGGACATTATAACCCAAGGAATAGCTCCAACTCC
CAAAGAGAATGAAATCACTACAGTCACAAGACCGACAAGCGACAATATCC
CCAATATGCTATAAAAGCGAGAATCTTCTGACACAAAACCCTCCAAAAAG
AATGCAATCGAAACAAGGAAAAAACTAGCAGCCATTCCAGATGATGATAT
TAAAAGAAGAAGCCTGCGGCCAGCTTTGTCCATCAACCATGTATTGACCC
CAGTGGCAACAACCTGAACAACCCCAAGTCCAAATGTAGCAACGTTACTT
GATGAAATCCCAGCGTTAGCAAAAATGTTACTGGAATAGAATAAAACACC
ATTGATGCCACTGAGTTGCT
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