DN617589

Overview
NameDN617589
Unique NameDN617589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR2_CHICK (Solute carrier family 2, facilitated glucose transporter member 2 OS=Gallus gallus GN=SLC2A2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12
Identity = 40/134 (29.85%), Postives = 77/134 (57.46%), Query Frame = 2
Query:  260 TCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            + G+  PT +  I  +  ++S      S+  VG MV +   G I + +GR  ++++  V +I G L++  +K       +  GR + G   G+ S  VP+Y++E++P  +RG+LG+++QL++  GI+++ +LGL
Sbjct:   92 SAGFEDPTVSPHILTMYWSLSV-----SMFAVGGMVSSFTVGWIGDRLGRVKAMLVVNVLSIAGNLLMGLAKMGPSHILIIAGRAITGLYCGLSSGLVPMYVSEVSPTALRGALGTLHQLAIVTGILISQVLGL 220          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GLCP_SYNY3 (Glucose transport protein OS=Synechocystis sp. (strain PCC 6803) GN=gtr PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12
Identity = 46/142 (32.39%), Postives = 71/142 (50.00%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 658
            ALG   FGF     +   A +    +       +  SLA +G+ +GA  +G IA+  GR  ++++AAV   +  +              R+L G GVG  S   P YIAE++P ++RG LGS+ QL++  GI +A L   F+
Sbjct:   25 ALGGFLFGFDTAVINGAVAALQKHFQTDSLLTGLSVSLALLGSALGAFGAGPIADRHGRIKTMILAAVLFTLSSIGSGLPFTIWDFIFWRVLGGIGVGAASVIAPAYIAEVSPAHLRGRLGSLQQLAIVSGIFIALLSNWFI 166          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR12_BOVIN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Bos taurus GN=SLC2A12 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 42/130 (32.31%), Postives = 73/130 (56.15%), Query Frame = 2
Query:  254 GFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL 643
            G+  G  S    +I + L LT  E  +  S   +GA++ ++  G + +  GR+ ++++++    +G L++  S   + L  GR+  G  + + S    VYIAEIAPQ+ RG L S+N+L + IGI+ AY+
Sbjct:   59 GYELGIISGALLQIRTLLVLTCHEQEMVVSSLLIGALLASLIGGVLIDRYGRRAAIILSSCLLGLGSLVLIISLSYTTLIGGRIAIGVFISLSSTATCVYIAEIAPQHRRGLLVSLNELMIVIGILFAYI 188          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: HXT1_YEAST (Low-affinity glucose transporter HXT1 OS=Saccharomyces cerevisiae GN=HXT1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 2
Query:  341 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRV 670
            S+ N+G  +G I   ++ +  GR+  L++  V   IG +I   S +  +  F+GR++ G GVG I+   P+ I+E+AP  MRG+L S  Q+ +T+GI L Y            V WRV
Sbjct:  120 SIFNIGCAIGGIVLAKLGDMYGRRIGLIVVVVIYTIGIIIQIASINKWYQYFIGRIISGLGVGGITVLSPMLISEVAPSEMRGTLVSCYQVMITLGIFLGYCTNFGTKNYSNSVQWRV 237          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: HXT10_YEAST (Hexose transporter HXT10 OS=Saccharomyces cerevisiae GN=HXT10 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12
Identity = 45/145 (31.03%), Postives = 74/145 (51.03%), Query Frame = 2
Query:  254 GFTCGYSSPTQAEIIS--DLKLTISEFSIFGS-------------LANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY 640
            GF  G+ + T +  I+  D K    E    GS             + N+G  +G +  G++ +  GRK  LM   +  ++G +I   S D  +  F+GR++ G GVG ++   P  I+EI+P+++RG+  S  QL +T+GI L Y
Sbjct:   60 GFIFGWDTGTISGFINQTDFKRRFGELQRDGSFQLSDVRTGLIVGIFNIGCALGGLTLGRLGDIYGRKIGLMCVILVYVVGIVIQIASSDKWYQYFIGRIVSGMGVGGVAVLSPTLISEISPKHLRGTCVSFYQLMITLGIFLGY 204          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR5_MOUSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Mus musculus GN=Slc2a5 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12
Identity = 40/124 (32.26%), Postives = 72/124 (58.06%), Query Frame = 2
Query:  290 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            E I    LT+  +S+  S+   G  + ++  G +   +G+K +L+   + +I+  + +  S+ +     + + RLL G   G+ S  VP+Y+ E+AP+N+RG+LG V QL +T+GI++A L GL
Sbjct:   59 ENIESFTLTLL-WSLTVSMFPFGGFISSLVVGNLVNKLGKKRALLFNNIFSILPAIFMGCSQIAQSFELIIISRLLVGICAGISSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQLFGL 181          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12
Identity = 39/119 (32.77%), Postives = 67/119 (56.30%), Query Frame = 2
Query:  332 IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV------NWRV 670
            +F S   + A+V +  +      +GR+ ++  A++  +IG  + + + +   L +GRL  GFGVG  +  VP++++EIAP  +RG L  V QL VTIGI++A ++  F        WR+
Sbjct:   81 LFTSSLYLAALVASFVASATCSKLGRRPTMQFASIFFLIGVGLTAGAVNLVMLIIGRLFLGFGVGFGNQAVPLFLSEIAPAQLRGGLNIVFQLMVTIGILIANIVNYFTATVHPYGWRI 199          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR7_MOUSE (Solute carrier family 2, facilitated glucose transporter member 7 OS=Mus musculus GN=Slc2a7 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12
Identity = 36/107 (33.64%), Postives = 66/107 (61.68%), Query Frame = 2
Query:  341 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            S+  +G ++G++  G +    GRKG+L+I  V  I   +++  SK +     + + R+L G   G+   T+P+Y+ E+APQN+RG+LG++ ++ V IG++LA +  L
Sbjct:   82 SMFPLGGLLGSLVVGLMVNKWGRKGTLLINNVFAITSAVLMGVSKVARAFELIILSRVLVGICAGIAYSTLPMYLGELAPQNLRGALGTMTEVFVIIGVLLAQIFSL 188          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR12_XENLA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Xenopus laevis GN=slc2a12 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12
Identity = 40/141 (28.37%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAV----PNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL 643
            A+  +  G+  G  S    ++ S L+LT  +  I  S   +GA+V ++  G + +  GR+ +++  ++     N++  +++S+      L  GR+  G  + + +    VYIAE++PQ+ RG L S+N+L +  GI+LAY+
Sbjct:   42 AISGLLVGYELGIISGALLQLQSLLELTCQQQEIVVSALLIGALVASLVGGCLIDLYGRRTTIIFTSILLVFANLLPVVVVSYGS----LIAGRIFIGVSISLSAIATCVYIAELSPQDKRGMLVSLNELMIVAGILLAYI 178          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: RAG1_KLULA (Low-affinity glucose transporter OS=Kluyveromyces lactis GN=RAG1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 2
Query:  341 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRV 670
            S+ N+G  VG I    I +  GR+  L+   +  +IG +I   S D  +  F+GR++ G GVG I+   P+ I+E AP+++RG+L S  QL +T GI L Y            V WRV
Sbjct:  118 SIFNIGCAVGGIVLSNIGDRWGRRIGLITVIIIYVIGIIIQIASVDKWYQYFIGRIISGLGVGGITVLSPMLISETAPKHLRGTLVSCYQLMITFGIFLGYCTNYGTKNYSNSVQWRV 235          
The following BLAST results are available for this feature:
BLAST of DN617589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
GTR2_CHICK4.105e-1229.85Solute carrier family 2, facilitated glucose trans... [more]
GLCP_SYNY34.105e-1232.39Glucose transport protein OS=Synechocystis sp. (st... [more]
GTR12_BOVIN5.362e-1232.31Solute carrier family 2, facilitated glucose trans... [more]
HXT1_YEAST7.003e-1234.75Low-affinity glucose transporter HXT1 OS=Saccharom... [more]
HXT10_YEAST7.003e-1231.03Hexose transporter HXT10 OS=Saccharomyces cerevisi... [more]
GTR5_MOUSE7.003e-1232.26Solute carrier family 2, facilitated glucose trans... [more]
STP6_ARATH9.146e-1232.77Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
GTR7_MOUSE9.146e-1233.64Solute carrier family 2, facilitated glucose trans... [more]
GTR12_XENLA9.146e-1228.37Solute carrier family 2, facilitated glucose trans... [more]
RAG1_KLULA1.195e-1136.44Low-affinity glucose transporter OS=Kluyveromyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617589 ID=DN617589; Name=DN617589; organism=Citrus sinensis; type=EST; length=671bp
TTCCATCAAATCAATAATCATCCAAACACCAACACCGTCTCCGTCGATCG
TAAAGTAACGAGAGGCAATGAGTTTTAGAGACGATAATGAAGAAGCGGCT
AATCTCCGTAAGCCGTTTCTCCACACGGGGAGTTGGTACAAAATGGGCTC
CAGACAGTCGAGTATCATGTCGTCATCGGCTCAGATGCTTCGTGACGGCT
CCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCGCCCTCGGCCCCATCCAA
TTCGGTTTCACTTGTGGCTACTCTTCACCTACGCAAGCCGAAATCATCAG
CGATCTTAAACTTACAATTTCGGAGTTCTCTATATTTGGCTCTTTAGCCA
ATGTGGGTGCTATGGTTGGTGCAATAGCTAGCGGTCAGATAGCAGAGTAC
ATTGGCCGAAAAGGGTCCCTAATGATTGCTGCTGTTCCTAATATTATAGG
ATGGCTCATCATATCTTTCTCCAAAGATTCCTCGTTTTTATTTATGGGAA
GGTTGTTGGAAGGATTTGGTGTTGGTGTAATCTCTTACACGGTGCCCGTG
TACATAGCTGAGATAGCACCTCAAAATATGAGAGGAAGTCTTGGATCTGT
CAATCAGCTCTCAGTTACGATTGGAATTATGCTGGCGTATCTATTGGGGC
TTTTTGTCAATTGGAGAGTGC
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