DN617589

Overview
NameDN617589
Unique NameDN617589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR8_RAT (Solute carrier family 2, facilitated glucose transporter member 8 OS=Rattus norvegicus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.099e-24
Identity = 63/149 (42.28%), Postives = 86/149 (57.72%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISD----LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWR 667
            ALGP+ FGF  GYSSP    +       L+L  +  S FG++  +GA  G +  G + +  GRK SL++  VP + G+ +I+ ++D   L  GRLL G   GV S   PVYI+EIA   +RG LGS  QL V  GI+LAY+ G  + WR
Sbjct:   34 ALGPLSFGFALGYSSPAIPSLRRTAPPALRLGDTAASWFGAVVTLGAAAGGVLGGWLLDRAGRKLSLLLCTVPFVTGFAVITAARDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVTGILLAYVAGWVLEWR 182          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR8_MOUSE (Solute carrier family 2, facilitated glucose transporter member 8 OS=Mus musculus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.099e-24
Identity = 64/149 (42.95%), Postives = 86/149 (57.72%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISD----LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWR 667
            ALGP+ FGF  GYSSP    +       L+L  +  S FG++  +GA  G I  G + +  GRK SL++  VP + G+ +I+ ++D   L  GRLL G   GV S   PVYI+EIA   +RG LGS  QL V  GI+LAY+ G  + WR
Sbjct:   34 ALGPLSFGFALGYSSPAIPSLRRTAPPALRLGDNAASWFGAVVTLGAAAGGILGGWLLDRSGRKLSLLLCTVPFVTGFAVITAARDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVTGILLAYVAGWVLEWR 182          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR8_BOVIN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Bos taurus GN=SLC2A8 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23
Identity = 61/149 (40.94%), Postives = 84/149 (56.38%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLK----LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWR 667
            ALGP+ FGF  GYSSP    +         L     S FG++  +GA  G +  G + +  GRK SL++ A+P + G+ +I+ +++   L  GRLL G   G+ S   PVYI+EIA   +RG LGS  QL V  GI+LAYL G  + WR
Sbjct:   34 ALGPLSFGFALGYSSPAIPSLRRAAPPAPHLDEDAASWFGAIVTLGAAAGGVLGGWLLDRAGRKLSLVLCALPFVAGFAVITAAQNLWMLLGGRLLTGLACGIASLVAPVYISEIAYPEVRGLLGSCVQLMVVTGILLAYLAGWVLEWR 182          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR6_HUMAN (Solute carrier family 2, facilitated glucose transporter member 6 OS=Homo sapiens GN=SLC2A6 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.465e-22
Identity = 55/148 (37.16%), Postives = 87/148 (58.78%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPT----QAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWR 667
            LG   FG+   Y+SP     +  +  DL LT S+ S FGS+  +GA  G +++  + + +GRK S+M +AVP+  G+ +++ +     L +GR L GF  G+ +  +PVY++EIAP  +RG+LG+  QL    G +  Y LGL + WR
Sbjct:   47 LGNFSFGYALVYTSPVIPALERSLDPDLHLTKSQASWFGSVFTLGAAAGGLSAMILNDLLGRKLSIMFSAVPSAAGYALMAGAHGLWMLLLGRTLTGFAGGLTAACIPVYVSEIAPPGVRGALGATPQLMAVFGSLSLYALGLLLPWR 194          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR1_DROME (Glucose transporter type 1 OS=Drosophila melanogaster GN=Glut1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 9.125e-20
Identity = 58/156 (37.18%), Postives = 91/156 (58.33%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLT--------ISE------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  +  I + +K          ISE      +S+  S+  +G M+G  + G +A   GRKG L++  V  I G  ++ F+K S     LF+GR + G   G+ +  VP+YI+EIAP N+RG LG+VNQL+VT+G++L+ +LG+
Sbjct:  267 LGMLQFGYNTGVINAPEKNIENFMKDVYKDRYGEDISEEFIQQLYSVAVSIFAIGGMLGGFSGGWMANRFGRKGGLLLNNVLGIAGACLMGFTKVSHSYEMLFLGRFIIGVNCGLNTSLVPMYISEIAPLNLRGGLGTVNQLAVTVGLLLSQVLGI 422          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.009e-18
Identity = 54/142 (38.03%), Postives = 82/142 (57.75%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKL---TISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG I FG+  G  +     +  DL +   T+ +  I  SL   GA VG+   G +A+  GR  +  + A+P  IG  + + ++    + +GRLL G G+G+ S  VP+YI+EI+P  +RG+LGSVNQL + IGI+ A + GL
Sbjct:  114 LGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLL-AGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICIGILAALIAGL 254          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18
Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL 643
            AL  + FG   G  +     I  + ++T        S    GA VGA+ SG ++  +GRK SLMI A+  + G L  + + +   L + R+L G  VGV SYT P+Y++EIAP+ +RGS+ S+ QL +TIGI+ AYL
Sbjct:   23 ALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYL 159          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18
Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL 643
            AL  + FG   G  +     I  + ++T        S    GA VGA+ SG ++  +GRK SLMI A+  + G L  + + +   L + R+L G  VGV SYT P+Y++EIAP+ +RGS+ S+ QL +TIGI+ AYL
Sbjct:   23 ALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYL 159          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.834e-18
Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLTISEFSI---FGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL 646
            +G + FG+  G  S     I  D ++      +     S+A VGAM+GA A G I +Y GRK + + A V    G ++++ + D   L  GRLL G GVGV S T PVYIAE +P  +RG L S N L +T G  L+YL+
Sbjct:   40 IGGLLFGYDTGVISGALLYIKDDFEVVKQSSFLQETIVSMALVGAMIGAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAPVYIAEASPSEVRGGLVSTNVLMITGGQFLSYLV 179          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 8.541e-18
Identity = 53/150 (35.33%), Postives = 88/150 (58.67%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFS---------IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF 655
            ALG + FG+  G +S     + S      + F+         + GSL   GA++G+I+   +A+++GR+  L+IAAV  ++G LI   + D + L +GRLL GFG+G+  +  P+YIAE  P  +RG+L S+ +L + +GI+L + +G F
Sbjct:  106 ALGGLLFGYDIGATSGATLSLQSPALSGTTWFNFSPVQLGLVVSGSL--YGALLGSISVYGVADFLGRRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGFSVGSF 253          
The following BLAST results are available for this feature:
BLAST of DN617589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
GTR8_RAT2.099e-2442.28Solute carrier family 2, facilitated glucose trans... [more]
GTR8_MOUSE2.099e-2442.95Solute carrier family 2, facilitated glucose trans... [more]
GTR8_BOVIN3.031e-2340.94Solute carrier family 2, facilitated glucose trans... [more]
GTR6_HUMAN7.465e-2237.16Solute carrier family 2, facilitated glucose trans... [more]
GTR1_DROME9.125e-2037.18Glucose transporter type 1 OS=Drosophila melanogas... [more]
PLST4_ARATH1.009e-1838.03Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
GALP_ECOLI2.935e-1839.42Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL62.935e-1839.42Galactose-proton symporter OS=Escherichia coli O6 ... [more]
INT1_ARATH3.834e-1840.00Probable inositol transporter 1 OS=Arabidopsis tha... [more]
XYLL3_ARATH8.541e-1835.33D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617589 ID=DN617589; Name=DN617589; organism=Citrus sinensis; type=EST; length=671bp
TTCCATCAAATCAATAATCATCCAAACACCAACACCGTCTCCGTCGATCG
TAAAGTAACGAGAGGCAATGAGTTTTAGAGACGATAATGAAGAAGCGGCT
AATCTCCGTAAGCCGTTTCTCCACACGGGGAGTTGGTACAAAATGGGCTC
CAGACAGTCGAGTATCATGTCGTCATCGGCTCAGATGCTTCGTGACGGCT
CCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCGCCCTCGGCCCCATCCAA
TTCGGTTTCACTTGTGGCTACTCTTCACCTACGCAAGCCGAAATCATCAG
CGATCTTAAACTTACAATTTCGGAGTTCTCTATATTTGGCTCTTTAGCCA
ATGTGGGTGCTATGGTTGGTGCAATAGCTAGCGGTCAGATAGCAGAGTAC
ATTGGCCGAAAAGGGTCCCTAATGATTGCTGCTGTTCCTAATATTATAGG
ATGGCTCATCATATCTTTCTCCAAAGATTCCTCGTTTTTATTTATGGGAA
GGTTGTTGGAAGGATTTGGTGTTGGTGTAATCTCTTACACGGTGCCCGTG
TACATAGCTGAGATAGCACCTCAAAATATGAGAGGAAGTCTTGGATCTGT
CAATCAGCTCTCAGTTACGATTGGAATTATGCTGGCGTATCTATTGGGGC
TTTTTGTCAATTGGAGAGTGC
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