DN617589

Overview
NameDN617589
Unique NameDN617589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR3_BOVIN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Bos taurus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15
Identity = 50/158 (31.65%), Postives = 83/158 (52.53%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 658
            +G  QFG+  G  +  +A I   L  T+ E              +S+  ++ +VG M+G+ + G      GR  S++I  +  I G  ++ F K +     L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + IGI++A + GL V
Sbjct:   19 IGSFQFGYNTGVINAPEAIIKDFLNYTLEERSEPPPSSVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRGNSMLIVNLLAIAGGCLMGFCKIAESVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKV 176          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15
Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 2
Query:  188 LRDGSXXXXXXXXXXALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL----LGLFVNWR 667
            LRD            A+  + FG   G  +     I     LT        S   +GA +GA+ +G ++  +GRK SLM  A+  ++G +  +F+     L   R++ G  VG+ SYT P+Y++E+A +N+RG + S+ QL VT+GI+LA+L         NWR
Sbjct:   15 LRDTRRMNMFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWR 178          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15
Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 2
Query:  188 LRDGSXXXXXXXXXXALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL----LGLFVNWR 667
            LRD            A+  + FG   G  +     I     LT        S   +GA +GA+ +G ++  +GRK SLM  A+  ++G +  +F+     L   R++ G  VG+ SYT P+Y++E+A +N+RG + S+ QL VT+GI+LA+L         NWR
Sbjct:   15 LRDTRRMNMFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWR 178          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe GN=itr2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 47/147 (31.97%), Postives = 83/147 (56.46%), Query Frame = 2
Query:  251 FGFTCGYSSPTQAEIISDLKLTIS--EFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG-----LFVNWRV 670
            FG+  G  S   A + SDL   +S  +  +  S  +  A++ A  SG +A+++GRK  L+ A    +IG +I++ S++ + + +GR + G+G+G+ S  VP+YI E+AP  +RG L  +  + +T G ++AY L      +   WR+
Sbjct:   95 FGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITELAPARLRGRLVIIYVVFITGGQLIAYSLNAAFEHVHQGWRI 241          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 45/156 (28.85%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            +G  QFG+  G  +  +  I   L  T+ E              +S+  ++ +VG M+G+ + G      GR+ S+++  +  I+G  ++ F+K +     L +GRL+ G   G+ +  VP+YI E++P  +RG+ G++NQL + +GI++A + GL
Sbjct:   19 IGSFQFGYNTGVINAPETIIKDFLNYTLEERLEDLPREGLLTTLWSLCVAIFSVGGMIGSFSVGLFVNRFGRRNSMLLVNLIAILGGCLMGFAKIAESVEMLILGRLIIGIFCGLCTGFVPMYIGEVSPTALRGAFGTLNQLGIVVGILVAQVFGL 174          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15
Identity = 42/109 (38.53%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  353 VGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL----LGLFVNWR 667
            +GA +GA+ +G ++  +GRK SLM+ AV  + G +  +F+     L + R++ G  VG+ SYT P+Y++E+A +N+RG + S+ QL VT+GI++A+L         NWR
Sbjct:   70 LGAAIGALFNGWLSFRLGRKYSLMVGAVLFVAGSVGSAFATSVEMLLVARIVLGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVMAFLSDTAFSYSGNWR 178          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15
Identity = 52/154 (33.77%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLK---LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN-----WRV 670
            ++    FG+  GY S     I +DL    LT  E  I  +  ++GA++ +I +G  A+  GRK  LM + +  +IG ++   +     + +GRL+ GFGVG+ S   P++I+EIAP+ +RG L  +N L +T G ++AY  G  +N     WR+
Sbjct:   94 SISGFMFGYDTGYISSALISIGTDLDHKVLTYGEKEIVTAATSLGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAPLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGWRI 247          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: INT3_ARATH (Probable inositol transporter 3 OS=Arabidopsis thaliana GN=INT3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15
Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 2
Query:  236 LGPIQFGFTCG-------YSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            +G + FG+  G       Y      E+  D K  + E  +  S+   GA+VGA   G   +  GR+ S++IA V  ++G L++  +     + +GRLL GFGVG+ S T P+YI+E++P  +RG+L S N L +T G  L+YL+ L
Sbjct:   35 IGGLLFGYNTGVIAGALLYIKEEFGEV--DNKTWLQEIIV--SMTVAGAIVGAAIGGWYNDKFGRRMSVLIADVLFLLGALVMVIAHAPWVIILGRLLVGFGVGMASMTSPLYISEMSPARIRGALVSTNGLLITGGQFLSYLINL 176          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR5_PONAB (Solute carrier family 2, facilitated glucose transporter member 5 OS=Pongo abelii GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15
Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = 2
Query:  290 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            E + D  LT+  +S+  S+   G  +G++  G +    GRKG+L+   + +I+  +++  S   K    + + RLL G   GV S  VP+Y+ E+AP+N+RG+LG V QL +T+GI++A + GL
Sbjct:   60 EFMEDFPLTLL-WSVTVSMFPFGGFIGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSRVAKSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQIFGL 182          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: MYCT_RAT (Proton myo-inositol cotransporter OS=Rattus norvegicus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 45/135 (33.33%), Postives = 74/135 (54.81%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA 637
            ALG   FG+  G  S     +   ++L      +  S A   A V A+A G +   +GR+ ++++A+    +G  +++ + +   L  GRL+ G G+G+ S TVPVYIAE++P N+RG L ++N L +T G   A
Sbjct:   59 ALGGFLFGYDTGVVSGAMLLLRRQMRLGAMWQELLVSGAVGAAAVAALAGGALNGALGRRSAILLASALCTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFA 193          
The following BLAST results are available for this feature:
BLAST of DN617589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
GTR3_BOVIN3.038e-1531.65Solute carrier family 2, facilitated glucose trans... [more]
ARAE_ECOLI3.038e-1532.32Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO573.038e-1532.32Arabinose-proton symporter OS=Escherichia coli O15... [more]
ITR2_SCHPO3.967e-1531.97Myo-inositol transporter 2 OS=Schizosaccharomyces ... [more]
GTR3_RAT3.967e-1528.85Solute carrier family 2, facilitated glucose trans... [more]
ARAE_KLEOX5.181e-1538.53Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]
ITR1_YEAST6.767e-1533.77Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
INT3_ARATH6.767e-1535.62Probable inositol transporter 3 OS=Arabidopsis tha... [more]
GTR5_PONAB6.767e-1535.48Solute carrier family 2, facilitated glucose trans... [more]
MYCT_RAT8.838e-1533.33Proton myo-inositol cotransporter OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617589 ID=DN617589; Name=DN617589; organism=Citrus sinensis; type=EST; length=671bp
TTCCATCAAATCAATAATCATCCAAACACCAACACCGTCTCCGTCGATCG
TAAAGTAACGAGAGGCAATGAGTTTTAGAGACGATAATGAAGAAGCGGCT
AATCTCCGTAAGCCGTTTCTCCACACGGGGAGTTGGTACAAAATGGGCTC
CAGACAGTCGAGTATCATGTCGTCATCGGCTCAGATGCTTCGTGACGGCT
CCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCGCCCTCGGCCCCATCCAA
TTCGGTTTCACTTGTGGCTACTCTTCACCTACGCAAGCCGAAATCATCAG
CGATCTTAAACTTACAATTTCGGAGTTCTCTATATTTGGCTCTTTAGCCA
ATGTGGGTGCTATGGTTGGTGCAATAGCTAGCGGTCAGATAGCAGAGTAC
ATTGGCCGAAAAGGGTCCCTAATGATTGCTGCTGTTCCTAATATTATAGG
ATGGCTCATCATATCTTTCTCCAAAGATTCCTCGTTTTTATTTATGGGAA
GGTTGTTGGAAGGATTTGGTGTTGGTGTAATCTCTTACACGGTGCCCGTG
TACATAGCTGAGATAGCACCTCAAAATATGAGAGGAAGTCTTGGATCTGT
CAATCAGCTCTCAGTTACGATTGGAATTATGCTGGCGTATCTATTGGGGC
TTTTTGTCAATTGGAGAGTGC
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