DN617589

Overview
NameDN617589
Unique NameDN617589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: MYCT_MOUSE (Proton myo-inositol cotransporter OS=Mus musculus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 45/135 (33.33%), Postives = 74/135 (54.81%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA 637
            ALG   FG+  G  S     +   ++L      +  S A   A V A+A G +   +GR+ ++++A+    +G  +++ + +   L  GRL+ G G+G+ S TVPVYIAE++P N+RG L ++N L +T G   A
Sbjct:   59 ALGGFLFGYDTGVVSGAMLLLRRQMRLGAMWQELLVSGAVGAAAVAALAGGALNGALGRRSAILLASALCTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFA 193          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR3_MOUSE (Solute carrier family 2, facilitated glucose transporter member 3 OS=Mus musculus GN=Slc2a3 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 45/156 (28.85%), Postives = 83/156 (53.21%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            +G  QFG+  G  +  +  +   L  T+ E              +S+  ++ +VG M+G+ + G      GR+ S+++  +  II   ++ F+K +     L +GRLL G   G+ +  VP+YI E++P  +RG+ G++NQL + +GI++A + GL
Sbjct:   19 IGSFQFGYNTGVINAPETILKDFLNYTLEERLEDLPSEGLLTALWSLCVAIFSVGGMIGSFSVGLFVNRFGRRNSMLLVNLLAIIAGCLMGFAKIAESVEMLILGRLLIGIFCGLCTGFVPMYIGEVSPTALRGAFGTLNQLGIVVGILVAQIFGL 174          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 47/158 (29.75%), Postives = 83/158 (52.53%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFV 658
            +G  QFG+  G  +  +  I   L  T+ E              +S+  ++ +VG M+G+ + G      GR+ S+++  +  + G  ++ F K +     L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + IGI++A + GL V
Sbjct:   19 IGSFQFGYNTGVINAPETIIKDFLNYTLEEKSENLPTEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKV 176          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14
Identity = 49/150 (32.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL-----GLFVNWR 667
            ALG + FG+  G  S     I   + L   +     S   +GA++GA   G  ++  GR+  L+++A+   +G L  +FS +   L + R++ G  VG  S  +P Y+AE+AP + RG++ S+ QL V  GI+LAY+      G +  WR
Sbjct:   14 ALGGLLFGYDTGVISGAILFIQKQMNLGSWQQGWVVSAVLLGAILGAAIIGPSSDRFGRRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRGTVSSLFQLMVMTGILLAYITNYSFSGFYTGWR 163          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLT-----ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            +G + FG+  G  S     I  D K       + E  +  S+A  GA+VGA   G   + +GR+ ++++A    ++G +I++ + + S L +GR+  G GVG+ S T P+YI+E +P  +RG+L S N   +T G  L+YL+ L
Sbjct:   37 IGGLLFGYDTGVISGALLYIRDDFKSVDRNTWLQEMIV--SMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPAKIRGALVSTNGFLITGGQFLSYLINL 178          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR5_HUMAN (Solute carrier family 2, facilitated glucose transporter member 5 OS=Homo sapiens GN=SLC2A5 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14
Identity = 43/124 (34.68%), Postives = 76/124 (61.29%), Query Frame = 2
Query:  290 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            E + D  LT+  +S+  S+   G  +G++  G +    GRKG+L+   + +I+  +++  S+ ++    + + RLL G   GV S  VP+Y+ E+AP+N+RG+LG V QL +T+GI++A + GL
Sbjct:   60 EFMEDFPLTLL-WSVTVSMFPFGGFIGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSRVATSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQIFGL 182          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR5_SHEEP (Solute carrier family 2, facilitated glucose transporter member 5 OS=Ovis aries GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.508e-14
Identity = 44/124 (35.48%), Postives = 76/124 (61.29%), Query Frame = 2
Query:  290 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            E +++  LT+  +S+  S+   G  +G++  G +   +GRKG+L+   + +I+  L++ FS   K    + + R+L G   G+ S  VP+Y+ E+AP+N RG+LG V QL +TIGI++A + GL
Sbjct:   60 EYMNEFYLTLL-WSVTVSMFPFGGFLGSLMVGPLVNNLGRKGTLLFNNIFSIVPALLMGFSDLAKSFEMIIVARVLVGICAGLSSNVVPMYLGELAPKNWRGALGVVPQLFITIGILVAQIFGL 182          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR5_BOVIN (Solute carrier family 2, facilitated glucose transporter member 5 OS=Bos taurus GN=SLC2A5 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.508e-14
Identity = 44/124 (35.48%), Postives = 76/124 (61.29%), Query Frame = 2
Query:  290 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFS---KDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            E +++  LT+  +S+  S+   G  +G++  G +   +GRKG+L+   + +I+  L++ FS   K    + + R+L G   G+ S  VP+Y+ E+AP+N RG+LG V QL +TIGI++A + GL
Sbjct:   60 EYMNEFYLTLL-WSVTVSMFPFGGFLGSLMVGPLVNNLGRKGTLLFNNIFSIVPALLMGFSELAKSFEMIIVARVLVGICAGLSSNVVPMYLGELAPKNWRGALGVVPQLFITIGILVAQIFGL 182          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.508e-14
Identity = 47/160 (29.38%), Postives = 88/160 (55.00%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLT------------------ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  Q  I      T                   + +++  ++ +VG M+ +   G I++++GRK ++++  V  ++G  ++  +  ++    L +GR L G   G+ S  VP+Y+ EIAP ++RG+LG++NQL++ IGI++A +LGL
Sbjct:   33 LGSLQFGYNIGVINAPQKVIEQSYNETWLGRQGPEGPSSIPPGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLVNNVLAVLGGSLMGLANAAASYEMLILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILIAQVLGL 192          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.969e-14
Identity = 49/154 (31.82%), Postives = 83/154 (53.90%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLK---LTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN-----WRV 670
            ++    FG+  GY S     I  DL    LT  E  +  +  ++GA++ ++ +G  A+  GR+  LM + +  +IG ++   +     +  GRL+ GFGVG+ S   P++I+EIAP+ +RG L  +N L +T G ++AY  G  +N     WR+
Sbjct:  117 SISGFMFGYDTGYISSALISINRDLDNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGRLTVINSLWLTGGQLIAYGCGAGLNHVKNGWRI 270          
The following BLAST results are available for this feature:
BLAST of DN617589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
MYCT_MOUSE8.838e-1533.33Proton myo-inositol cotransporter OS=Mus musculus ... [more]
GTR3_MOUSE8.838e-1528.85Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA8.838e-1529.75Solute carrier family 2, facilitated glucose trans... [more]
XYLT_LACBR1.154e-1432.67D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
INT2_ARATH1.154e-1433.33Probable inositol transporter 2 OS=Arabidopsis tha... [more]
GTR5_HUMAN1.154e-1434.68Solute carrier family 2, facilitated glucose trans... [more]
GTR5_SHEEP1.508e-1435.48Solute carrier family 2, facilitated glucose trans... [more]
GTR5_BOVIN1.508e-1435.48Solute carrier family 2, facilitated glucose trans... [more]
GTR4_HUMAN1.508e-1429.38Solute carrier family 2, facilitated glucose trans... [more]
ITR2_YEAST1.969e-1431.82Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617589 ID=DN617589; Name=DN617589; organism=Citrus sinensis; type=EST; length=671bp
TTCCATCAAATCAATAATCATCCAAACACCAACACCGTCTCCGTCGATCG
TAAAGTAACGAGAGGCAATGAGTTTTAGAGACGATAATGAAGAAGCGGCT
AATCTCCGTAAGCCGTTTCTCCACACGGGGAGTTGGTACAAAATGGGCTC
CAGACAGTCGAGTATCATGTCGTCATCGGCTCAGATGCTTCGTGACGGCT
CCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCGCCCTCGGCCCCATCCAA
TTCGGTTTCACTTGTGGCTACTCTTCACCTACGCAAGCCGAAATCATCAG
CGATCTTAAACTTACAATTTCGGAGTTCTCTATATTTGGCTCTTTAGCCA
ATGTGGGTGCTATGGTTGGTGCAATAGCTAGCGGTCAGATAGCAGAGTAC
ATTGGCCGAAAAGGGTCCCTAATGATTGCTGCTGTTCCTAATATTATAGG
ATGGCTCATCATATCTTTCTCCAAAGATTCCTCGTTTTTATTTATGGGAA
GGTTGTTGGAAGGATTTGGTGTTGGTGTAATCTCTTACACGGTGCCCGTG
TACATAGCTGAGATAGCACCTCAAAATATGAGAGGAAGTCTTGGATCTGT
CAATCAGCTCTCAGTTACGATTGGAATTATGCTGGCGTATCTATTGGGGC
TTTTTGTCAATTGGAGAGTGC
back to top