DN617589

Overview
NameDN617589
Unique NameDN617589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.571e-14
Identity = 47/160 (29.38%), Postives = 87/160 (54.37%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLT------------------ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  Q  I      T                   + +++  ++ +VG M+ +   G I++++GRK +++   V  ++G  ++  +  ++    L +GR L G   G+ S  VP+Y+ EIAP ++RG+LG++NQL++ IGI++A +LGL
Sbjct:   33 LGSLQFGYNIGVINAPQKVIEQSYNATWLGRQGPGGPDSIPQGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAAASYEILILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILVAQVLGL 192          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 47/147 (31.97%), Postives = 82/147 (55.78%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSS--------PTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 649
            ALG + FG+  G +S        PT + I S   L+  +  I  S +  GA++G+I +  +A+ IGR+  L++AA   ++G ++   +   S L +GR+  G G+G+  +  P+YIAE AP  +RG + S+ + S  +G++  Y +G
Sbjct:   55 ALGALLFGYEIGATSCAIMSLKSPTLSGI-SWYDLSSVDVGIITSGSLYGALIGSIVAFSVADIIGRRKELILAAFLYLVGAIVTVVAPVFSILIIGRVTYGMGIGLTMHAAPMYIAETAPSQIRGRMISLKEFSTVLGMVGGYGIG 200          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: PLST1_ARATH (Probable plastidic glucose transporter 1 OS=Arabidopsis thaliana GN=At1g05030 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 37/104 (35.58%), Postives = 63/104 (60.58%), Query Frame = 2
Query:  341 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            S+   GA +G+I +G + +  G + +  I  +P I+G L+ + +     +  GR L G G+GV +  VP+YI+E+AP   RGSLG++ Q+   +GI+ + LLG+
Sbjct:  125 SIFIAGAFIGSIVAGPLVDKFGYRRTFQIFTIPLILGALVSAQAHSLDEILCGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQIGTCLGIIFSLLLGI 228          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: MYCT_HUMAN (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 45/135 (33.33%), Postives = 70/135 (51.85%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLA 637
            ALG   FG+  G  S     +   L L      +  S     A V A+A G +    GR+ ++++A+     G  +++ + +   L  GRL+ G G+G+ S TVPVYIAE++P N+RG L ++N L +T G   A
Sbjct:   70 ALGGFLFGYDTGVVSGAMLLLKRQLSLDALWQELLVSSTVGAAAVSALAGGALNGVFGRRAAILLASALFTAGSAVLAAANNKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFA 204          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR5_RABIT (Solute carrier family 2, facilitated glucose transporter member 5 OS=Oryctolagus cuniculus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 43/124 (34.68%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  290 EIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            E+I +  LT+  +S+  S+   G   G++  G +    GRKG+L+   + +I+  +++  SK +     + + RLL G   GV S  VP+Y+ E+AP+N+RG+LG  +QL +T+GI++A + GL
Sbjct:   61 ELIDEFPLTLL-WSVTVSMFPSGGFAGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSKVARSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVESQLFITLGILVAQIFGL 183          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR4_MOUSE (Solute carrier family 2, facilitated glucose transporter member 4 OS=Mus musculus GN=Slc2a4 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 47/160 (29.38%), Postives = 85/160 (53.12%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLT------------------ISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  Q  I      T                   + +++  ++ +VG M+ +   G I++++GRK +++   V  ++G  ++  +        L +GR L G   G+ S  VP+Y+ EIAP ++RG+LG++NQL++ IGI++A +LGL
Sbjct:   33 LGSLQFGYNIGVINAPQKVIEQSYNATWLGRQGPGGPDSIPQGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAVASYEILILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILVAQVLGL 192          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14
Identity = 39/121 (32.23%), Postives = 70/121 (57.85%), Query Frame = 2
Query:  329 SIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF-------VNWRV 670
            ++F S   V A+V ++ +  I    GRK S+ +      IG     F+++ + L +GR+L GFGVG  + +VPVY++E+AP N+RG+  +  Q+++  GI++A ++  F       + WR+
Sbjct:   82 TLFTSSLYVAALVSSLFASTITRVFGRKWSMFLGGFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQSVPVYLSEMAPPNLRGAFNNGFQVAIIFGIVVATIINYFTAQMKGNIGWRI 202          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14
Identity = 44/153 (28.76%), Postives = 81/153 (52.94%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL-------LGLFVNWRV 670
            +L  +  G+  G  S     I  DLK+T  +  +     ++ ++ G++A G+ ++ IGRK ++ +AA+    G  +++ +     L +GR L G G+G+     PVYIAEI+P   RG   S  ++ + +GI+L Y+       L + ++WR+
Sbjct:   63 SLNNVLLGYDVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLFGSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVARGFFTSFPEIFINLGILLGYVSNYAFSGLSVHISWRI 215          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14
Identity = 44/138 (31.88%), Postives = 78/138 (56.52%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDL---KLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAY 640
            +G + FG+  G  S     I + L   +LT        S  ++GA++G I +G +A++ GRK  + IA++  I+G ++   +     + +GR + G+GVG+ S  +P+Y++EIAP  +RG L  +  L +T G ++AY
Sbjct:   96 IGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIAY 233          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: HGT1_KLULA (High-affinity glucose transporter OS=Kluyveromyces lactis GN=HGT1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14
Identity = 45/138 (32.61%), Postives = 76/138 (55.07%), Query Frame = 2
Query:  245 IQFGFT-CGYSSPTQAEIISDLKLTISEFSIFGSLANV--GAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLG 649
            + FGF     SS    ++  D        +  G  A++  G+ +G++ S   ++  GRK SL I A   IIG ++   ++D + L +GR++ G G+G  S   PVY +EI+P  +RG++  + Q SVT+GIM+ + +G
Sbjct:   40 LMFGFDIASMSSMIGTDVYKDYFSNPDSLTYGGITASMAGGSFLGSLISPNFSDAFGRKVSLHICAALWIIGAILQCAAQDQAMLIVGRVISGMGIGFGSSAAPVYCSEISPPKIRGTISGLFQFSVTVGIMVLFYIG 177          
The following BLAST results are available for this feature:
BLAST of DN617589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
GTR4_RAT2.571e-1429.38Solute carrier family 2, facilitated glucose trans... [more]
XYLL1_ARATH4.386e-1431.97D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
PLST1_ARATH4.386e-1435.58Probable plastidic glucose transporter 1 OS=Arabid... [more]
MYCT_HUMAN4.386e-1433.33Proton myo-inositol cotransporter OS=Homo sapiens ... [more]
GTR5_RABIT4.386e-1434.68Solute carrier family 2, facilitated glucose trans... [more]
GTR4_MOUSE4.386e-1429.38Solute carrier family 2, facilitated glucose trans... [more]
STP4_ARATH5.729e-1432.23Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
PLT4_ARATH5.729e-1428.76Probable polyol transporter 4 OS=Arabidopsis thali... [more]
ITR1_SCHPO5.729e-1431.88Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]
HGT1_KLULA5.729e-1432.61High-affinity glucose transporter OS=Kluyveromyces... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617589 ID=DN617589; Name=DN617589; organism=Citrus sinensis; type=EST; length=671bp
TTCCATCAAATCAATAATCATCCAAACACCAACACCGTCTCCGTCGATCG
TAAAGTAACGAGAGGCAATGAGTTTTAGAGACGATAATGAAGAAGCGGCT
AATCTCCGTAAGCCGTTTCTCCACACGGGGAGTTGGTACAAAATGGGCTC
CAGACAGTCGAGTATCATGTCGTCATCGGCTCAGATGCTTCGTGACGGCT
CCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCGCCCTCGGCCCCATCCAA
TTCGGTTTCACTTGTGGCTACTCTTCACCTACGCAAGCCGAAATCATCAG
CGATCTTAAACTTACAATTTCGGAGTTCTCTATATTTGGCTCTTTAGCCA
ATGTGGGTGCTATGGTTGGTGCAATAGCTAGCGGTCAGATAGCAGAGTAC
ATTGGCCGAAAAGGGTCCCTAATGATTGCTGCTGTTCCTAATATTATAGG
ATGGCTCATCATATCTTTCTCCAAAGATTCCTCGTTTTTATTTATGGGAA
GGTTGTTGGAAGGATTTGGTGTTGGTGTAATCTCTTACACGGTGCCCGTG
TACATAGCTGAGATAGCACCTCAAAATATGAGAGGAAGTCTTGGATCTGT
CAATCAGCTCTCAGTTACGATTGGAATTATGCTGGCGTATCTATTGGGGC
TTTTTGTCAATTGGAGAGTGC
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