DN617589

Overview
NameDN617589
Unique NameDN617589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:18..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13
Identity = 43/156 (27.56%), Postives = 81/156 (51.92%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISF---SKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            +G  QFG+  G  +  +  I   +  T+++              +S+  ++ +VG M+G+ + G      GR+ S++I  +  + G   +     +K    L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + +GI++A + GL
Sbjct:   19 IGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGL 174          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13
Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 2
Query:  329 SIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF---VNW 664
            ++F S   + A+  ++ +  +    GRK S+++  V    G L+  F+     L +GRLL GFG+G  + +VP+Y++E+AP   RG+L    QLS+TIGI++A +L  F   ++W
Sbjct:   83 TLFTSSLYLAALCSSLVASYVTRQFGRKISMLLGGVLFCAGALLNGFATAVWMLIVGRLLLGFGIGFTNQSVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLNFFFSKISW 197          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13
Identity = 46/148 (31.08%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  251 FGFTCGYSSPTQAEIISDLKL---TISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVN-----WRV 670
            FG+  G  +     I SDL     T++E  +  S+   GA +G++ SG +A+  GR+ +  I A+P I+G  +   S   + + +GR L G G+G+      +Y+ E++P  +RG+ GS  Q++  +G+M A  +G+ V+     WRV
Sbjct:   65 FGYHLGVVNEPLESISSDLGFSGDTLAE-GLVVSVCLGGAFLGSLFSGGVADGFGRRRAFQICALPMILGAFVSGVSNSLAVMLLGRFLVGTGMGLGPPVAALYVTEVSPAFVRGTYGSFIQIATCLGLMAALFIGIPVHNITGWWRV 211          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: HXT3_YEAST (Low-affinity glucose transporter HXT3 OS=Saccharomyces cerevisiae GN=HXT3 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13
Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 2
Query:  341 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRV 670
            S+ N+G  +G I   ++ +  GRK  L++  V  IIG +I   S +  +  F+GR++ G GVG I+   P+ I+E+AP+ MRG+L S  QL +T+GI L Y            V WRV
Sbjct:  117 SIFNIGCAIGGIILAKLGDMYGRKMGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLSPMLISEVAPKEMRGTLVSCYQLMITLGIFLGYCTNFGTKNYSNSVQWRV 234          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13
Identity = 45/157 (28.66%), Postives = 85/157 (54.14%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEI---------------ISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDS---SFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  Q  I               IS   LT + +S+  ++ +VG M+G+ + G      GR+ S++++ +   +  +++ FSK +     L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+ +QL + +GI++A + GL
Sbjct:   20 LGSLQFGYNTGVINRPQKVIEDFYNHTWLYRYEEPISPATLT-TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMSNILAFLAAVLMGFSKMALSFEMLILGRFIIGLYSGLTTGFVPMYVGEVSPTALRGALGTFHQLGIVLGILIAQVFGL 175          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR14_HUMAN (Solute carrier family 2, facilitated glucose transporter member 14 OS=Homo sapiens GN=SLC2A14 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13
Identity = 44/156 (28.21%), Postives = 81/156 (51.92%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISDLKLTISE--------------FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSS---FLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            +G  QFG+  G  +  +  I   +  T+++              +S+  ++ +VG M+G+ + G      GR+ S++I  +    G  ++   K +     L +GRL+ G   G+ +  VP+YI EI+P  +RG+ G++NQL + IGI++A + GL
Sbjct:   43 IGSFQFGYNTGVINAPETIIKEFINKTLTDKANAPPSEVLLTNLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAATGGCLMGLCKIAESVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGL 198          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: YB91_YEAST (Probable metabolite transport protein YBR241C OS=Saccharomyces cerevisiae GN=YBR241C PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13
Identity = 43/125 (34.40%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  305 LKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL----FVNWR 667
            + LT S++    S+ ++G + G+  +G  A   GRK   M A+   ++  L++ FS     L  GR L G   G      P++I EIAP   RG++GS+NQ+S+ +GI+L   L L      NWR
Sbjct:   80 IALTDSQYGAITSIFSIGGLFGSYYAGNWANRYGRKYVSMGASAMCMVSSLLLFFSNSYLQLLFGRFLVGMSCGTAIVITPLFINEIAPVEWRGAMGSMNQVSINLGILLTQTLALKYADSYNWR 204          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13
Identity = 44/157 (28.03%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQ---------------AEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  Q                E I    LT + +S+  ++ +VG M+G+ + G      GR+ S+++  +   +  +++ FSK       L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+++QL + +GI++A + GL
Sbjct:   21 LGSLQFGYNTGVINAPQKVIEEFYNQTWNHRYGESIPSTTLT-TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGL 176          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR1_BOVIN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Bos taurus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13
Identity = 44/157 (28.03%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQ---------------AEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  Q                E I    LT + +S+  ++ +VG M+G+ + G      GR+ S+++  +   +  +++ FSK       L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+++QL + +GI++A + GL
Sbjct:   21 LGSLQFGYNTGVINAPQKVIEEFYNQTWVQRYGEPIPPATLT-TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTELRGALGTLHQLGIVVGILIAQVFGL 176          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 2
Query:  332 IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL 646
            +F S   + A+V +  +  I    GRK S+ I  +  +IG L  +F+ + S L +GRLL G GVG  + + PVY++E+AP  +RG+L    Q+++TIGI++A L+
Sbjct:   86 LFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLI 190          
The following BLAST results are available for this feature:
BLAST of DN617589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
GTR3_HUMAN2.177e-1327.56Solute carrier family 2, facilitated glucose trans... [more]
STP12_ARATH2.843e-1334.78Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
PLST2_ARATH2.843e-1331.08Probable plastidic glucose transporter 2 OS=Arabid... [more]
HXT3_YEAST2.843e-1337.29Low-affinity glucose transporter HXT3 OS=Saccharom... [more]
GTR1_CHICK3.713e-1328.66Solute carrier family 2, facilitated glucose trans... [more]
GTR14_HUMAN3.713e-1328.21Solute carrier family 2, facilitated glucose trans... [more]
YB91_YEAST4.850e-1334.40Probable metabolite transport protein YBR241C OS=S... [more]
GTR1_RAT4.850e-1328.03Solute carrier family 2, facilitated glucose trans... [more]
GTR1_BOVIN4.850e-1328.03Solute carrier family 2, facilitated glucose trans... [more]
STP10_ARATH6.334e-1338.10Sugar transport protein 10 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617589 ID=DN617589; Name=DN617589; organism=Citrus sinensis; type=EST; length=671bp
TTCCATCAAATCAATAATCATCCAAACACCAACACCGTCTCCGTCGATCG
TAAAGTAACGAGAGGCAATGAGTTTTAGAGACGATAATGAAGAAGCGGCT
AATCTCCGTAAGCCGTTTCTCCACACGGGGAGTTGGTACAAAATGGGCTC
CAGACAGTCGAGTATCATGTCGTCATCGGCTCAGATGCTTCGTGACGGCT
CCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCGCCCTCGGCCCCATCCAA
TTCGGTTTCACTTGTGGCTACTCTTCACCTACGCAAGCCGAAATCATCAG
CGATCTTAAACTTACAATTTCGGAGTTCTCTATATTTGGCTCTTTAGCCA
ATGTGGGTGCTATGGTTGGTGCAATAGCTAGCGGTCAGATAGCAGAGTAC
ATTGGCCGAAAAGGGTCCCTAATGATTGCTGCTGTTCCTAATATTATAGG
ATGGCTCATCATATCTTTCTCCAAAGATTCCTCGTTTTTATTTATGGGAA
GGTTGTTGGAAGGATTTGGTGTTGGTGTAATCTCTTACACGGTGCCCGTG
TACATAGCTGAGATAGCACCTCAAAATATGAGAGGAAGTCTTGGATCTGT
CAATCAGCTCTCAGTTACGATTGGAATTATGCTGGCGTATCTATTGGGGC
TTTTTGTCAATTGGAGAGTGC
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