DN617589

Overview
NameDN617589
Unique NameDN617589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1103 contig Csv1_Contig1103:18..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR1_MOUSE (Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus GN=Slc2a1 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 44/157 (28.03%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQ---------------AEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  Q                E I    LT + +S+  ++ +VG M+G+ + G      GR+ S+++  +   +  +++ FSK       L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+++QL + +GI++A + GL
Sbjct:   21 LGSLQFGYNTGVINAPQKVIEEFYNQTWNHRIGEPIPSTTLT-TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVAAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGL 176          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 44/156 (28.21%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEII-------------SDLKLTISE-FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  Q  I              S L  T++  +S+  ++ +VG M+G+ + G      GR+ S+++  +   +  +++ FSK       L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+++QL + +GI++A + GL
Sbjct:   21 LGSLQFGYNTGVINAPQKVIEEFYNQTWVHRYGESILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGL 176          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13
Identity = 37/105 (35.24%), Postives = 64/105 (60.95%), Query Frame = 2
Query:  332 IFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLL 646
            +F S   + A+  +  +  +    GRK S+ +  V  +IG L  +F+ + + L +GRLL G GVG  + + PVY++E+AP  +RG+L    Q+++TIGI++A L+
Sbjct:   86 LFTSSLYLAALASSFVASAVTRKYGRKISMFVGGVAFLIGSLFNAFATNVAMLIVGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILIANLI 190          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13
Identity = 39/109 (35.78%), Postives = 65/109 (59.63%), Query Frame = 2
Query:  329 SIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLF 655
            ++F S   + A++ ++ +  I    GRK S++   V    G +I   +K    L +GR+L GFG+G  + +VP+Y++E+AP   RG+L    QLS+TIGI++A +L  F
Sbjct:   85 TMFTSSLYLAALIASLVASTITRKFGRKLSMLFGGVLFCAGAIINGAAKAVWMLILGRILLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLNYF 193          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR12_MOUSE (Solute carrier family 2, facilitated glucose transporter member 12 OS=Mus musculus GN=Slc2a12 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13
Identity = 43/137 (31.39%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL 643
            A+  +  G+  G  S    +I + L LT  E  +  S   +GA + ++  G + +  GR+ ++++++    +G L++  S   + L MGR+  G  + + S    VYIAEIAPQ+ RG L S+N+L +  GI+ AY+
Sbjct:   52 AISGLLVGYELGLISGALLQIRTLLALTCHEQEMVVSSLLIGAFLASLTGGVLIDRYGRRLAIILSSCLLGLGSLVLIMSLSYTLLIMGRVAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVTGILFAYI 188          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12
Identity = 43/157 (27.39%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  236 LGPIQFGFTCGYSSPTQAEIISD--------------LKLTISE-FSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSK---DSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            LG +QFG+  G  +  Q ++I +              L  T++  +S+  ++ +VG M+G+ + G      GR+ S+++  +   +  +++ FSK       L +GR + G   G+ +  VP+Y+ E++P  +RG+LG+++QL + +GI++A + GL
Sbjct:   21 LGSLQFGYNTGVINAPQ-KVIEEFYNQTWIHRYGERILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLAKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGL 176          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12
Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 2
Query:  341 SLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSF-LFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL-------FVNWRV 670
            S+ N+G  +G I   ++ +  GR+  LMI  +  ++G +I   S D  +  F+GR++ G GVG IS   P+ I+E AP+++RG+L S  QL +T GI L Y            V WRV
Sbjct:  117 SIFNIGCAIGGIILSKLGDMYGRRIGLMIVVLIYVVGIIIQIASIDKWYQYFIGRIISGLGVGGISVLSPMLISETAPKHIRGTLVSFYQLMITFGIFLGYCTNYGTKTYSNSVQWRV 234          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR12_MACFA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Macaca fascicularis GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12
Identity = 42/137 (30.66%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL 643
            A+  +  G+  G  S    +I + L L+  E  +  S   +GA++ ++  G + +  GR+ ++++++    +G L++  S   + L +GR+  G  + + S    VYIAEIAPQ+ RG L S+N+L + IGI+ AY+
Sbjct:   52 AVSGLLVGYELGIISGALLQIKTLLTLSCHEQEMVVSSLLIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYI 188          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: GTR12_HUMAN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12
Identity = 42/137 (30.66%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKLTISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYL 643
            A+  +  G+  G  S    +I + L L+  E  +  S   +GA++ ++  G + +  GR+ ++++++    +G L++  S   + L +GR+  G  + + S    VYIAEIAPQ+ RG L S+N+L + IGI+ AY+
Sbjct:   48 AVSGLLVGYELGIISGALLQIKTLLALSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYI 184          
BLAST of DN617589 vs. ExPASy Swiss-Prot
Match: PLST3_ARATH (Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12
Identity = 40/143 (27.97%), Postives = 79/143 (55.24%), Query Frame = 2
Query:  233 ALGPIQFGFTCGYSSPTQAEIISDLKL---TISEFSIFGSLANVGAMVGAIASGQIAEYIGRKGSLMIAAVPNIIGWLIISFSKDSSFLFMGRLLEGFGVGVISYTVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGL 652
            +L  + FG+  G  + T   I  DL     TI+E  +  +    GA +G++ SG +A+ +GR+ +  ++A+P I+G  + + ++    + +GR L G G+G+      +Y+ E++P  +RG+ GS  Q++  IG++ +   G+
Sbjct:   62 SLTSLLFGYHLGVVNETLESISIDLGFSGNTIAEGLVVSTCLG-GAFIGSLFSGLVADGVGRRRAFQLSALPMIVGASVSASTESLMGMLLGRFLVGIGMGIGPSVTALYVTEVSPAYVRGTYGSSTQIATCIGLLGSLFAGI 203          
The following BLAST results are available for this feature:
BLAST of DN617589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
GTR1_MOUSE6.334e-1328.03Solute carrier family 2, facilitated glucose trans... [more]
GTR1_HUMAN6.334e-1328.21Solute carrier family 2, facilitated glucose trans... [more]
STP9_ARATH8.272e-1335.24Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
STC_RICCO8.272e-1335.78Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
GTR12_MOUSE8.272e-1331.39Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RABIT1.080e-1227.39Solute carrier family 2, facilitated glucose trans... [more]
KHT2_KLULA1.411e-1236.44Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]
GTR12_MACFA1.411e-1230.66Solute carrier family 2, facilitated glucose trans... [more]
GTR12_HUMAN1.411e-1230.66Solute carrier family 2, facilitated glucose trans... [more]
PLST3_ARATH1.843e-1227.97Probable plastidic glucose transporter 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617589 ID=DN617589; Name=DN617589; organism=Citrus sinensis; type=EST; length=671bp
TTCCATCAAATCAATAATCATCCAAACACCAACACCGTCTCCGTCGATCG
TAAAGTAACGAGAGGCAATGAGTTTTAGAGACGATAATGAAGAAGCGGCT
AATCTCCGTAAGCCGTTTCTCCACACGGGGAGTTGGTACAAAATGGGCTC
CAGACAGTCGAGTATCATGTCGTCATCGGCTCAGATGCTTCGTGACGGCT
CCGTCTCCGTTGTCTTTTGCGTCCTCGTCGTCGCCCTCGGCCCCATCCAA
TTCGGTTTCACTTGTGGCTACTCTTCACCTACGCAAGCCGAAATCATCAG
CGATCTTAAACTTACAATTTCGGAGTTCTCTATATTTGGCTCTTTAGCCA
ATGTGGGTGCTATGGTTGGTGCAATAGCTAGCGGTCAGATAGCAGAGTAC
ATTGGCCGAAAAGGGTCCCTAATGATTGCTGCTGTTCCTAATATTATAGG
ATGGCTCATCATATCTTTCTCCAAAGATTCCTCGTTTTTATTTATGGGAA
GGTTGTTGGAAGGATTTGGTGTTGGTGTAATCTCTTACACGGTGCCCGTG
TACATAGCTGAGATAGCACCTCAAAATATGAGAGGAAGTCTTGGATCTGT
CAATCAGCTCTCAGTTACGATTGGAATTATGCTGGCGTATCTATTGGGGC
TTTTTGTCAATTGGAGAGTGC
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