DN617582

Overview
NameDN617582
Unique NameDN617582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617582_ssr36 microsatellite DN617582_ssr36:36..47. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:36..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_BACV8 (Adenylate kinase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=adk PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26
Identity = 73/182 (40.11%), Postives = 103/182 (56.59%), Query Frame = 2
Query:  191 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKI------EPEFVLFFDCSEEEMERRILNRNH--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAV 706
            G PGSGKGTQ   IVE FG  H+S GD+LRAEIK G+E G   +  I +G+++P E+ I +L   ++     K +I DGFPR     A  EA+ K+      E   +L  D  EEE+  R++ R    GR DDN ETI+KR  V+   + P++ +Y+ +GK + I     +  +F D V AV
Sbjct:    8 GAPGSGKGTQSERIVEKFGINHISTGDVLRAEIKKGTELGKTAKGYIDQGQLLPDELIIDILASTLDSFKESKGVIFDGFPR---TIAQAEALKKMLAERGQEVSVMLDLDVPEEELMTRLIKRGQESGRADDNEETIKKRLVVYHSQTAPLIDWYKNEGKYQHIHGLGTMDAIFADIVAAV 186          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_XANCP (Adenylate kinase OS=Xanthomonas campestris pv. campestris GN=adk PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.195e-26
Identity = 65/176 (36.93%), Postives = 109/176 (61.93%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            LG PGSGKGTQ A + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  E+ + +L+  + ++   + F++DG+PRN     A ++ ++KI +P + V+  D + E +  RI  R    GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:    6 LGPPGSGKGTQAARLKDTFQIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_XANC8 (Adenylate kinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=adk PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.195e-26
Identity = 65/176 (36.93%), Postives = 109/176 (61.93%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            LG PGSGKGTQ A + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  E+ + +L+  + ++   + F++DG+PRN     A ++ ++KI +P + V+  D + E +  RI  R    GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:    6 LGPPGSGKGTQAARLKDTFQIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_XANCB (Adenylate kinase OS=Xanthomonas campestris pv. campestris (strain B100) GN=adk PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25
Identity = 65/176 (36.93%), Postives = 108/176 (61.36%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            LG PGSGKGTQ A + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  E+ + +L+  + ++   + F++DG+PRN     A ++ ++KI +P + V+  D + E +  RI  R    GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV   +
Sbjct:    6 LGPPGSGKGTQAARLKDTFQIPHISTGDLLRAEVAAGSPLGVKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLKRI 181          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_CORU7 (Adenylate kinase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=adk PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25
Identity = 66/173 (38.15%), Postives = 102/173 (58.96%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDA 694
            LG PG+GKGTQ   + +     H+S GDL RA I  G+E G   Q  +  GK+VP+EVT  +++  +EE+   + FL+DGFPR  E     E + K   ++ + V+ +  SE+ +  R+L+R  GR DDN  TIR R +V+ E + P++ YY+  G++  IDA   V ++ +A
Sbjct:    6 LGPPGAGKGTQAQLLSDALNIPHISTGDLFRANISQGTELGKQAQEYMDAGKLVPTEVTANMVRARLEEADAANGFLLDGFPRTIEQADLLEEMLKEKDLKLDAVINYQVSEDVVVERMLSR--GRNDDNESTIRTRLQVYREETAPLIDYYQ--GRILNIDAEGSVEDISEA 174          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_XANC5 (Adenylate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=adk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.803e-25
Identity = 65/176 (36.93%), Postives = 107/176 (60.80%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            LG PGSGKGTQ   + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A  E + KI +P + V+  D + E +  RI  R    GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:    6 LGPPGSGKGTQATRLKDTFDIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_XANAC (Adenylate kinase OS=Xanthomonas axonopodis pv. citri GN=adk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.803e-25
Identity = 65/176 (36.93%), Postives = 107/176 (60.80%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            LG PGSGKGTQ   + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A  E + KI +P + V+  D + E +  RI  R    GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:    6 LGPPGSGKGTQATRLKDTFDIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_XANOR (Adenylate kinase OS=Xanthomonas oryzae pv. oryzae GN=adk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.354e-25
Identity = 64/177 (36.16%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 700
            LG PGSGKGTQ   + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A    ++KI +P + V+  D + E +  RI  R    GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + ++
Sbjct:    6 LGPPGSGKGTQATRLKDTFEIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLTRVDGVGSLDEVLERIR 182          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_XANOM (Adenylate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=adk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.354e-25
Identity = 64/177 (36.16%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 700
            LG PGSGKGTQ   + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A    ++KI +P + V+  D + E +  RI  R    GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + ++
Sbjct:    6 LGPPGSGKGTQATRLKDTFEIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLTRVDGVGSLDEVLERIR 182          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_THET8 (Adenylate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=adk PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.075e-25
Identity = 63/180 (35.00%), Postives = 107/180 (59.44%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN--HGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKA 703
            LG PG+GKGTQ + + +  G+  LS GD+LR  +  G+  G  ++ +++ G +VP ++ ++L+++ + E    + + DGFPR     A  EA+ ++  E       V+  +  EEE+ RRIL R    GR DDN ET+R+R +V+ E + P+V YYEA+G ++++D      EV+  ++A
Sbjct:   10 LGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERGDLVPDDLILELIREELAE----RVIFDGFPR---TLAQAEALDRLLSETGTRLLGVVLVEVPEEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEARGVLKRVDGLGTPDEVYARIRA 182          
The following BLAST results are available for this feature:
BLAST of DN617582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_BACV83.632e-2640.11Adenylate kinase OS=Bacteroides vulgatus (strain A... [more]
KAD_XANCP6.195e-2636.93Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_XANC86.195e-2636.93Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_XANCB1.057e-2536.93Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_CORU71.057e-2538.15Adenylate kinase OS=Corynebacterium urealyticum (s... [more]
KAD_XANC51.803e-2536.93Adenylate kinase OS=Xanthomonas campestris pv. ves... [more]
KAD_XANAC1.803e-2536.93Adenylate kinase OS=Xanthomonas axonopodis pv. cit... [more]
KAD_XANOR2.354e-2536.16Adenylate kinase OS=Xanthomonas oryzae pv. oryzae ... [more]
KAD_XANOM2.354e-2536.16Adenylate kinase OS=Xanthomonas oryzae pv. oryzae ... [more]
KAD_THET83.075e-2535.00Adenylate kinase OS=Thermus thermophilus (strain H... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617582 ID=DN617582; Name=DN617582; organism=Citrus sinensis; type=EST; length=755bp
CATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCTCCAA
ACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAGTTAG
TTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAGATGC
TACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGACCAG
GCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGGATAC
ACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTGGCTC
TGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATCGTTC
CTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGA
AATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATCGTGC
TGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTTTTTG
ACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCACGGA
AGAGAAGATGATAACGTTGAGACAATTAGGAAGCGGTTTAAGGTTTTCTT
AGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAAGTTC
GGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAA
GCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTCTCTGT
CCAGA
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