DN617582

Overview
NameDN617582
Unique NameDN617582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617582_ssr36 microsatellite DN617582_ssr36:36..47. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:36..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_SODGM (Adenylate kinase OS=Sodalis glossinidius (strain morsitans) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 61/208 (29.33%), Postives = 100/208 (48.08%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------HGREDDNVETIRKRFKVFLESSLPVVQYYEAK---GKVR--KIDAAKPVAEVFDAVKAV 706
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+ SE G   + ++  GK+V  E+ I L ++ +++    + FL+DGFPR      A + V  I  ++VL F   +  +  RI+ R                                R+DD  +T+RKR   + + + P++ YY  +   G  R   +D  + V+EV   + A+
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAQSELGRQAKALMDAGKLVTDELVIALAKERIKQDHCRNGFLLDGFPRTLPQADAMKEV-GIAVDYVLEFAVPDSLIIDRIVGRRVHAPSGRVYHVKFNPPKQEGKDDVTGELLTSRKDDQEDTVRKRLVEYHQQTAPLIDYYRKEADAGNTRYFTLDGTRNVSEVSAELAAI 212          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_HAMD5 (Adenylate kinase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 58/208 (27.88%), Postives = 99/208 (47.60%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNHG-----------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 706
            LG PG+GKGTQ   I++ +G   +S GD+LRA +K+G++ G  +Q ++  GK+V  ++ I L+ ++  +E   + FL+DGFPR      A  A   I+ ++VL     +E +  RI  R                                R+DD   T+R+R   + + ++ +V YY  +      K  K+D  + V EV   + ++
Sbjct:    6 LGAPGAGKGTQAQFIMKKYGIVQISTGDMLRAAVKAGTKLGQQVQGIMAAGKLVTDDLVIALVKERIRQEDCKEGFLLDGFPRTIPQADAM-AEADIKIDYVLELVVPDEFIVERISGRRVHMPSGRIYHLKFNPPKITDKDDMTGESLTLRKDDQETTVRERLLEYHQQTMALVDYYRQRAKRGDTKYFKLDGTRTVNEVSQQLSSI 212          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_CLOPS (Adenylate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 52/203 (25.62%), Postives = 96/203 (47.29%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNR------------------NHG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            LG PG+GKGTQ  +I   +   H+S GD+ R  I   +  G   ++ +  G++VP EVTI +++  +++    + +L+DGFPR      A +       E +   L  +  +E +  R+  R                  N G           R+DD  ET+++R  V+   + P++ +Y+ K ++  +D  + + EVF+++
Sbjct:    6 LGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQLVPDEVTINMVKDRLQQDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVIQRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESI 208          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_CLOPE (Adenylate kinase OS=Clostridium perfringens GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 52/203 (25.62%), Postives = 96/203 (47.29%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNR------------------NHG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            LG PG+GKGTQ  +I   +   H+S GD+ R  I   +  G   ++ +  G++VP EVTI +++  +++    + +L+DGFPR      A +       E +   L  +  +E +  R+  R                  N G           R+DD  ET+++R  V+   + P++ +Y+ K ++  +D  + + EVF+++
Sbjct:    8 LGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQLVPDEVTINMVKDRLQQDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVIQRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESI 210          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_CLOP1 (Adenylate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 52/203 (25.62%), Postives = 96/203 (47.29%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNR------------------NHG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            LG PG+GKGTQ  +I   +   H+S GD+ R  I   +  G   ++ +  G++VP EVTI +++  +++    + +L+DGFPR      A +       E +   L  +  +E +  R+  R                  N G           R+DD  ET+++R  V+   + P++ +Y+ K ++  +D  + + EVF+++
Sbjct:    6 LGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQLVPDEVTINMVKDRLQQDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVIQRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESI 208          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_CHLMU (Adenylate kinase OS=Chlamydia muridarum GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 58/208 (27.88%), Postives = 95/208 (45.67%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFL--------------IDGFPRN-EENRAAFEAVTKIEPEF-VLFFDCSEEEMERR------------ILNRNHG-------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF 688
            +G PGSGKGTQ   +       H+S+GDLLR  +   +  G  I++ + +GK++P ++  KL+ + ++E   D  L              +DGFPR   + +   E +    P++ ++  D S+EE+  R            I N+  G             R DD  E I  R + + + + PV+ YY A  ++  IDA  P  +VF
Sbjct:   11 MGAPGSGKGTQSKLLASQLSLQHISSGDLLRNAVSQNTPLGQEIKSYLDQGKLLPDQLVWKLVHEKLDELQQDTLLRKLSFLSRSENGAILDGFPRTVAQAKLLNEFLCSYFPDYKIILLDISDEEVLNRLTSRYICPSCQGIYNKQQGFSRCPKCLVELTRRSDDTPEVILDRIQTYKQETQPVLDYYAALQRLITIDANAPTQQVF 218          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_BART1 (Adenylate kinase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 54/183 (29.51%), Postives = 89/183 (48.63%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEP-------EFVLFFDCSEEEMERRILNR----NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 700
            LG PG+GKGTQ   + E +   HLS GD+LR  I   +E G   + +I  G +VP  +  +++   ++E+   + F++DG+PR      A + + + +        E  +  D   E MERR+          R DDN     KR   + E + P+ ++Y  +G ++ ID    +AEV   +K
Sbjct:    6 LGPPGAGKGTQAKMLTEEYNIPHLSTGDMLREVIAKETEVGKKAKAIISSGALVPDSIVNQIVSDRIDEADCINGFILDGYPRTVGQAEALQQILESKNMRLDAVIELCVNEDALIERMERRVQETVAAGGQVRLDDNPVAFAKRLVEYREKTSPLSKFYSERGMLKVIDGMIGIAEVTRIIK 188          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_ACICJ (Adenylate kinase OS=Acidiphilium cryptum (strain JF-5) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 53/200 (26.50%), Postives = 93/200 (46.50%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSEEEMERRILNR---------------------------NHG---REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 685
            LG PG+GKGTQ   + + +G   ++ GD+LRAE+K+G+E G   + +++ G +V  E+ I +L+  + +    + F++DGFPR      A +   A  K + + V+     E  +  RI  R                           +H    R DD  E ++ R   +   + P++ YYE KG++  +D    + +V
Sbjct:    6 LGPPGAGKGTQAKILQDRYGVAQIATGDMLRAEVKAGTELGRAAKAVMESGALVSDEIIIGMLRNRLSQPDCRNGFILDGFPRTVPQAEALDTMLAEQKFDLDAVILLKVDEAVLVERISGRFTCAHCGAGYHDKFHPTGVPGVCDKCGSHDFVRRPDDKAEVVKDRLVAYNAQTAPILPYYEQKGRLHVVDGMAAMDQV 205          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_HALMA (Adenylate kinase OS=Haloarcula marismortui GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16
Identity = 57/204 (27.94%), Postives = 95/204 (46.57%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRA----EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------HGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 700
            +G PG+GKGTQ AN+ E +G  H++ GD LRA    +I          +  ++ G +VP  V   ++ +A+ ++  D F++DG+PRN E     E +T +  + +L  D S EE+  R+  R                                R+DDN E++R R  VF +++ PV+ +Y        ID  +   EV+  ++
Sbjct:    9 VGPPGAGKGTQSANLAEAYGVEHITTGDALRANKDMDISDMDTEYDTPREYMEAGDLVPDAVVNAIVDEALSQA--DGFVLDGYPRNLEQAEELEGMTAL--DVILSLDVSREELVDRLTGRRVCDDCGTNYHVEFNQPEEDGVCDECGGDLIQRDDDNEESVRNRLDVFDDNTAPVIDHYGDHDGFVAIDGEQTPDEVWSEIQ 208          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_BURPS (Adenylate kinase OS=Burkholderia pseudomallei GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16
Identity = 65/216 (30.09%), Postives = 100/216 (46.30%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCS-EEEMERRILNRNH----------------------------GREDDNVETIRKRFKVFLESSLPVVQYY--------------EAKGKVRKIDAAKPV-AEVFDAVK 700
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+G+  G   +  + EGK+VP  + I L+++ ++E+   + +L DGFPR      A +    +  ++VL  D    E +ER    R H                             R+DD  ET++KR  V+   + P++ YY               A  K+  + A + + A VFDA+K
Sbjct:    6 LGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQADAMKE-AGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLVQRDDDKEETVKKRLDVYEAQTKPLITYYGDWARRGAENGLKAPAYRKISGLGAVEEIRARVFDALK 220          
The following BLAST results are available for this feature:
BLAST of DN617582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_SODGM2.609e-1629.33Adenylate kinase OS=Sodalis glossinidius (strain m... [more]
KAD_HAMD52.609e-1627.88Adenylate kinase OS=Hamiltonella defensa subsp. Ac... [more]
KAD_CLOPS2.609e-1625.62Adenylate kinase OS=Clostridium perfringens (strai... [more]
KAD_CLOPE2.609e-1625.62Adenylate kinase OS=Clostridium perfringens GN=adk... [more]
KAD_CLOP12.609e-1625.62Adenylate kinase OS=Clostridium perfringens (strai... [more]
KAD_CHLMU2.609e-1627.88Adenylate kinase OS=Chlamydia muridarum GN=adk PE=... [more]
KAD_BART12.609e-1629.51Adenylate kinase OS=Bartonella tribocorum (strain ... [more]
KAD_ACICJ2.609e-1626.50Adenylate kinase OS=Acidiphilium cryptum (strain J... [more]
KAD_HALMA3.407e-1627.94Adenylate kinase OS=Haloarcula marismortui GN=adk ... [more]
KAD_BURPS3.407e-1630.09Adenylate kinase OS=Burkholderia pseudomallei GN=a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617582 ID=DN617582; Name=DN617582; organism=Citrus sinensis; type=EST; length=755bp
CATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCTCCAA
ACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAGTTAG
TTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAGATGC
TACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGACCAG
GCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGGATAC
ACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTGGCTC
TGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATCGTTC
CTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGA
AATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATCGTGC
TGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTTTTTG
ACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCACGGA
AGAGAAGATGATAACGTTGAGACAATTAGGAAGCGGTTTAAGGTTTTCTT
AGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAAGTTC
GGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAA
GCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTCTCTGT
CCAGA
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