DN617582

Overview
NameDN617582
Unique NameDN617582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617582_ssr36 microsatellite DN617582_ssr36:36..47. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:36..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_THEFY (Adenylate kinase OS=Thermobifida fusca (strain YX) GN=adk PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23
Identity = 62/172 (36.05%), Postives = 92/172 (53.49%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNH--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 685
            +G PG+GKGTQ   +        +S GD+ RA +  G+E G   Q  +  G +VP E+T  +++  + E+     FL+DGFPRN       + +     ++ + VL     EEE+ RR+  R     R DDN ETIR R  V+ E + P+V +YE +G + KIDA  P+ EV
Sbjct:    6 VGPPGAGKGTQAQILASKLSIPKVSTGDIFRANVSGGTELGKKAQAYMDRGDLVPDEITNAMVRDRLAEDDARAGFLLDGFPRNLAQAETLDEMLADLGVKLDVVLELVVDEEEVIRRLAERARIDNRSDDNEETIRHRLVVYREQTAPLVSFYEKRGLLEKIDAVGPIEEV 177          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_SYNPW (Adenylate kinase OS=Synechococcus sp. (strain WH7803) GN=adk PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23
Identity = 57/175 (32.57%), Postives = 98/175 (56.00%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNRNHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKA 703
            +G PG+GKGTQ + + E  G  HLS GDLLR+E+ +GS  G   + ++  G++V  ++ + +++  +       +L+DGFPRN     A E +    +   E V+  +  +E +  R+L R  GR DDN   IR R +V+ + + P++ YY+A+G +  +DA   V  +   ++A
Sbjct:    8 IGPPGAGKGTQASRLCETHGLRHLSTGDLLRSEVSAGSALGQEAEAVMNRGELVSDDLVLAIVRSQLTALNGQGWLLDGFPRNVAQAEALEPLLGELQQSIETVVLLELDDEVLVERLLAR--GRADDNESVIRNRLEVYRQQTAPLIDYYQARGLLISVDAQGSVEAITTRLEA 180          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD1_SYNY3 (Adenylate kinase 1 OS=Synechocystis sp. (strain PCC 6803) GN=adk1 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23
Identity = 62/181 (34.25%), Postives = 102/181 (56.35%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAF--EAVTKI--EPEFVLFFDCSEEEMERRILNRNHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 715
            LG PGSGKGTQ   + E  G  H+S GD+LR  I  G+E G   +  + +G++VP ++ + L+++ +  +     +++DGFPRN  N+A F  E +  I     +V+     +E +  R+L R  GR DDN  TIR R  V+ E + P++ YY+ +GK+  +D  +PV  +   ++ +  P
Sbjct:    8 LGAPGSGKGTQAVGLAETLGIPHISTGDMLRQAIADGTELGNQAKGYMDKGELVPDQLILGLIEERLGHKDAKAGWILDGFPRN-VNQAIFLDELLVNIGHRTHWVINLKVPDEVIVERLLAR--GRADDNETTIRNRLLVYTEQTAPLMAYYQEQGKLYSLDGNQPVEAIATNLEKLVKP 185          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_LEPBP (Adenylate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=adk PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.878e-23
Identity = 59/176 (33.52%), Postives = 100/176 (56.82%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            +G PG+GKGTQ   I E +    +S GD+LRA +K+G+  G   +  +  G +VP  V I +++ + +E    + F++DGFPR  E   A   + K   +E + V+  D  +EE+ +R+L R    GR DDN ETI+ R   +   +LP++ +Y+A G +R+I+    + E+ + +
Sbjct:    7 MGPPGAGKGTQADIIKEKYNIPQISTGDILRAAVKNGTAMGIEAKKYMDAGDLVPDAVVIGIIRDRLVEADCANGFILDGFPRTVEQAKALSEILKELHMELDSVVNLDVPDEELVKRLLGRAIKEGRSDDNEETIKNRLHTYNTKTLPLIDFYKATGILRQINGLGSMEEITNTI 182          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_LEPBA (Adenylate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=adk PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.878e-23
Identity = 59/176 (33.52%), Postives = 100/176 (56.82%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 697
            +G PG+GKGTQ   I E +    +S GD+LRA +K+G+  G   +  +  G +VP  V I +++ + +E    + F++DGFPR  E   A   + K   +E + V+  D  +EE+ +R+L R    GR DDN ETI+ R   +   +LP++ +Y+A G +R+I+    + E+ + +
Sbjct:    7 MGPPGAGKGTQADIIKEKYNIPQISTGDILRAAVKNGTAMGIEAKKYMDAGDLVPDAVVIGIIRDRLVEADCANGFILDGFPRTVEQAKALSEILKELHMELDSVVNLDVPDEELVKRLLGRAIKEGRSDDNEETIKNRLHTYNTKTLPLIDFYKATGILRQINGLGSMEEITNTI 182          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_CAMC1 (Adenylate kinase OS=Campylobacter concisus (strain 13826) GN=adk PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.878e-23
Identity = 60/176 (34.09%), Postives = 93/176 (52.84%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFG-YTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 700
            +G PGSGK T  + I +H   + H S GDLLRAE+ SGSE G +I   I +G +VP +V +  +  A++ S     +IDG+PR+ E     + V   + E     V+  D SE+    R+L R  G  DDN E    R KV+L+   P+ ++Y  K  +  ++  + + E+   +K
Sbjct:    8 IGAPGSGKTTDASLIAQHDEKFAHFSTGDLLRAEVASGSELGKLIDGFISKGNLVPLDVVVNAIVSAIKSSNKSNIIIDGYPRSVEQMTELDKVLSEQDEISLKGVIEVDVSEDVARARVLGRARG-ADDNNEVFNNRMKVYLDPIKPIRKFYSEKELLHVVNGERGIDEIVADIK 182          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_STRM5 (Adenylate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=adk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23
Identity = 61/172 (35.47%), Postives = 101/172 (58.72%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 685
            LG PGSGKGTQ   + E  G  H+S GD+LRAEI +GSE G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN     A +  + KI +P + V+  D + E +  RI  R    GR DD+ E +R+R +V+ + + PVV +Y A+G + ++D    + E+
Sbjct:    6 LGPPGSGKGTQATRLKEKLGIAHISTGDMLRAEIAAGSELGKQAKAVMDAGNLVSDDILLGMLESRLTQADVAKGFILDGYPRNVAQANAMDGLLAKIGQPLDAVVQLDVATELLVDRIAGRAKEQGRADDSPEAVRQRLQVYNDQTAPVVDFYAARGTLARVDGVGELDEI 177          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_CORA7 (Adenylate kinase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=adk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23
Identity = 63/169 (37.28%), Postives = 99/169 (58.58%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNHGREDDNVETIRKRFKVFLESSLPVVQYY-------EAKGKVRKID 661
            LG PG+GKGTQ A + E  G  H+S GDL RA I  G+  G   ++ I  GK+VP++VT ++++  + ++   D FL+DGFPR  +     E +     ++ + VL F+ SE+ +  R+L R  GR DD  ETIR R  V+ E + P++++Y       +A+G V +I+
Sbjct:    6 LGPPGAGKGTQAALLSEKLGVPHISTGDLFRANIGEGTPLGLEAKSYIDAGKLVPTDVTARMVEDRLNQDDAKDGFLLDGFPRTVQQADILEKLLSDKDLKLDGVLNFEVSEDVVVERMLAR--GRADDTEETIRTRLGVYREETFPLIEHYGDAIISIKAEGTVEEIN 172          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_BRAHW (Adenylate kinase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=adk PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23
Identity = 62/175 (35.43%), Postives = 99/175 (56.57%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 700
            +G PG GKGTQ A I + +  +H++ GD+LR  I +G+E G   ++ + +G++VP  + I +L+ +  ++   + F++DGFPR  E       + +    +   V+    SEE +  R+L R  GR DDN ETI+ R KVF   S PV+ YY  K K+ KI++     EV+  +K
Sbjct:    7 IGAPGVGKGTQSALIEKDYSISHIATGDMLRENIANGTELGKTAKSYMDKGELVPDSLVIDMLKDRIKKDDCKNGFMLDGFPRTIEQAKELSNILESLNYKISAVIDIFASEEIIIDRLLKR--GRADDNEETIKNRLKVFENQSKPVLDYYSDKAKIIKIESIGTPEEVYAKIK 179          
BLAST of DN617582 vs. ExPASy Swiss-Prot
Match: KAD_PROM4 (Adenylate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=adk PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.373e-23
Identity = 60/169 (35.50%), Postives = 98/169 (57.99%), Query Frame = 2
Query:  188 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK--IEP-EFVLFFDCSEEEMERRILNRNHGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 685
            LG PG+GKGTQ   + E+ G  HLS GDLLRAE+ + S  G     ++ +G++V  E+ + ++QK +       +L+DGFPRN     + + + +   +P + VL  +  +E + +R+L+R  GR DD  E IR R +V+ E + P+V +Y++ G + KI     V +V
Sbjct:    8 LGPPGAGKGTQAKLLCENQGLIHLSTGDLLRAEVNAQSPLGKEAALIMNKGELVSDEIVLSIVQKRLSADAKSGWLLDGFPRNLIQAQSLQQLLENVSQPIQAVLLIELDDETLIKRLLSR--GRSDDTQEVIRHRLEVYREKTAPLVDFYQSLGILVKIQGEGDVKDV 174          
The following BLAST results are available for this feature:
BLAST of DN617582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_THEFY2.204e-2336.05Adenylate kinase OS=Thermobifida fusca (strain YX)... [more]
KAD_SYNPW2.204e-2332.57Adenylate kinase OS=Synechococcus sp. (strain WH78... [more]
KAD1_SYNY32.204e-2334.25Adenylate kinase 1 OS=Synechocystis sp. (strain PC... [more]
KAD_LEPBP2.878e-2333.52Adenylate kinase OS=Leptospira biflexa serovar Pat... [more]
KAD_LEPBA2.878e-2333.52Adenylate kinase OS=Leptospira biflexa serovar Pat... [more]
KAD_CAMC12.878e-2334.09Adenylate kinase OS=Campylobacter concisus (strain... [more]
KAD_STRM54.909e-2335.47Adenylate kinase OS=Stenotrophomonas maltophilia (... [more]
KAD_CORA74.909e-2337.28Adenylate kinase OS=Corynebacterium aurimucosum (s... [more]
KAD_BRAHW6.411e-2335.43Adenylate kinase OS=Brachyspira hyodysenteriae (st... [more]
KAD_PROM48.373e-2335.50Adenylate kinase OS=Prochlorococcus marinus (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617582 ID=DN617582; Name=DN617582; organism=Citrus sinensis; type=EST; length=755bp
CATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCTCCAA
ACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAGTTAG
TTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAGATGC
TACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGACCAG
GCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGGATAC
ACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTGGCTC
TGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATCGTTC
CTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGA
AATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATCGTGC
TGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTTTTTG
ACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCACGGA
AGAGAAGATGATAACGTTGAGACAATTAGGAAGCGGTTTAAGGTTTTCTT
AGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAAGTTC
GGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAA
GCTGTTTTTACCCCAAAAGATGAGAAGGCTGCTGCTTAGGTCTTCTCTGT
CCAGA
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