DN617581

Overview
NameDN617581
Unique NameDN617581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1814 contig Csv1_Contig1814:322..1007. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD_CAMJJ (Adenylate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=adk PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = -1
Query:  273 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 686
            + SGSE G  I + I +G +VP +V +  +  A++ +     +IDG+PR+ E    F+ V   + E     V+    SEE  + R+L RN+G  DDN E    R KV+ E    ++ +Y+ K     ID  + +  +   +K
Sbjct:   43 VASGSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKVLSEQNEICLKGVIEVRVSEEVAKERVLGRNRG-ADDNEEVFYNRMKVYTEPLNEILDFYQKKKLHFIIDGERTIEPIVADMK 183          
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD_CAMJ8 (Adenylate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=adk PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = -1
Query:  273 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 686
            + SGSE G  I + I +G +VP +V +  +  A++ +     +IDG+PR+ E    F+ V   + E     V+    SEE  + R+L RN+G  DDN E    R KV+ E    ++ +Y+ K     ID  + +  +   +K
Sbjct:   43 VASGSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKVLSEQNEICLKGVIEVRVSEEVAKERVLGRNRG-ADDNEEVFYNRMKVYTEPLNEILDFYQKKKLHFIIDGERTIEPIVADMK 183          
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD2_CAEEL (Adenylate kinase 2, mitochondrial OS=Caenorhabditis elegans GN=let-754 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 54/185 (29.19%), Postives = 87/185 (47.03%), Query Frame = -1
Query:  240 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVT---KIEPEFVLFFDCSEEEMERRILNR----NQGRE-------------------------DDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV---FDAVKAVFTPKDEKAA 686
            + SGSE G  ++  +  GK+V  EV  KL+++ +E+      F++DGFPR        + +    K   + V+ F+ +++ + RRI  R      GR                          DDN ET+RKR   + + ++P+V YY+  G    +DAAKP+ +V    D V A FT K E+ +
Sbjct:   65 VASGSEFGKELKATMDAGKLVSDEVVCKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRITGRLFHIASGRSYHLEFKPPKVPMKDDLTGEPLIRRSDDNEETLRKRLVQYHQMTVPLVDYYKKHGVHVAVDAAKPMTDVKAHIDQVFAKFTQKKERVS 249          
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD_SYNPW (Adenylate kinase OS=Synechococcus sp. (strain WH7803) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 38/142 (26.76%), Postives = 74/142 (52.11%), Query Frame = -1
Query:  270 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVT---KIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKA 686
            + +GS  G   + ++  G++V  ++ + +++  +       +L+DGFPRN     A E +    +   E V+  +  +E +  R+L R  GR DDN   IR R +V+ + + P++ YY+A+G +  +DA   V  +   ++A
Sbjct:   41 VSAGSALGQEAEAVMNRGELVSDDLVLAIVRSQLTALNGQGWLLDGFPRNVAQAEALEPLLGELQQSIETVVLLELDDEVLVERLLAR--GRADDNESVIRNRLEVYRQQTAPLIDYYQARGLLISVDAQGSVEAITTRLEA 180          
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD_HELHP (Adenylate kinase OS=Helicobacter hepaticus GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 40/148 (27.03%), Postives = 74/148 (50.00%), Query Frame = -1
Query:  255 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFE----AVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK 686
            + SGSE G  I + I +G +VP ++ +  +  A+  +  D  +IDG+PR+ E   A +    A  +++   V+  + SE     R+L R +G  DDNVE    R +V+L     +  +Y  +  + KI+  + + E+   +++    K
Sbjct:   43 VASGSEYGKTIDSFISKGNLVPLDIVVGTIINAIANAPKDVIIIDGYPRSIEQMEALDEKLKAQNQVQLVSVIEVEVSESVARERVLGRARG-ADDNVEVFNNRMQVYLTPLKDIETFYSKQKVLHKINGERMIEEIVSEMESFIKGK 189          
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD_ECOL6 (Adenylate kinase OS=Escherichia coli O6 GN=adk PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = -1
Query:  267 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 686
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD_ECOL5 (Adenylate kinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = -1
Query:  267 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 686
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD_ECO81 (Adenylate kinase OS=Escherichia coli O81 (strain ED1a) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = -1
Query:  267 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 686
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD_ECO7I (Adenylate kinase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = -1
Query:  267 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 686
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DN617581 vs. ExPASy Swiss-Prot
Match: KAD_ECO27 (Adenylate kinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = -1
Query:  267 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 686
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
The following BLAST results are available for this feature:
BLAST of DN617581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
KAD_CAMJJ9.562e-1230.28Adenylate kinase OS=Campylobacter jejuni subsp. je... [more]
KAD_CAMJ89.562e-1230.28Adenylate kinase OS=Campylobacter jejuni subsp. je... [more]
KAD2_CAEEL9.562e-1229.19Adenylate kinase 2, mitochondrial OS=Caenorhabditi... [more]
KAD_SYNPW1.249e-1126.76Adenylate kinase OS=Synechococcus sp. (strain WH78... [more]
KAD_HELHP1.249e-1127.03Adenylate kinase OS=Helicobacter hepaticus GN=adk ... [more]
KAD_ECOL61.249e-1129.14Adenylate kinase OS=Escherichia coli O6 GN=adk PE=... [more]
KAD_ECOL51.249e-1129.14Adenylate kinase OS=Escherichia coli O6:K15:H31 (s... [more]
KAD_ECO811.249e-1129.14Adenylate kinase OS=Escherichia coli O81 (strain E... [more]
KAD_ECO7I1.249e-1129.14Adenylate kinase OS=Escherichia coli O7:K1 (strain... [more]
KAD_ECO271.249e-1129.14Adenylate kinase OS=Escherichia coli O127:H6 (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617581 ID=DN617581; Name=DN617581; organism=Citrus sinensis; type=EST; length=686bp
CTTTTAAGCATCAATGGCTGTTATTATTACTGCTTGATCTTGCTATTACA
GTCTCAATAACAAGAATACATAGGCAAACAAGAATAAATATCATGATACA
CTATGAACTTCTATGACATTCTAGTAAAACATGTGGCATAATAACCTCAT
AATAATAAAGTACAATAATAGGCAGCAGCCAACAACAATACCACCACCTT
GATATTAAATCTGATACTCTGGACAGAGAAGACCTAAGCAGCAGCCTTCT
CATCTTTTGGGGTAAAAACAGCTTTAACAGCATCAAAAACCTCTGCAACA
GGCTTTGCAGCATCAATCTTCCGAACTTTACCCTTAGCTTCATAATATTG
AACCACAGGGAGACTAGATTCTAAGAAAACCTTAAACCGCTTCCTAATTG
TCTCAACGTTATCATCTTCTCTTCCCTGATTCCTATTCAAAATGCGCCTC
TCCATCTCCTCCTCAGAACAGTCAAAAAACAGAACGAATTCTGGCTCAAT
TTTGGTAACAGCTTCAAATGCAGCACGATTTTCCTCGTTTCTGGGAAAAC
CATCGATGAGAAATTTATCATTTCCACTTTCCTCCATTGCTTTTTGGAGA
AGCTTAATTGTGACCTCTGAAGGAACGATTTTTCCCTCTTTAATCATGTT
CTGAATCATGGTTCCATTTTCAGAGCCAGATTTGAT
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