DN617575

Overview
NameDN617575
Unique NameDN617575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 4.601e-16
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = -2
Query:  211 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 573
            +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D S EE +  V +       F+  G+A    K FK
Sbjct:  314 FDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGIWVFRGQELAFPLSPDWQVDYESYTWRKLDPSSEETQTLVREYFAWEGAFQHVGKAFNQGKVFK 437          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_ARTSA (Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 7.848e-16
Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = -2
Query:  271 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQ 579
            + +D E YS+W+ +YKY DE    +++ N ++G  QR++  RK AF  + + G +    + G+W++RG ++  K   D   D E YDWKK D   +E K+ V Q
Sbjct:  306 EKFDKENYSIWYSEYKYQDELAKVYMSCNLITGMFQRIEKMRKQAFASVCVFGEDNDSSISGIWVWRGQDLAFKLSPDWQIDYESYDWKKLDPDAQETKDLVTQ 409          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_MOUSE (Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.025e-15
Identity = 41/124 (33.06%), Postives = 68/124 (54.84%), Query Frame = -2
Query:  211 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 573
            +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D   EE +  V +       F+  G+A+   K FK
Sbjct:  314 FDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGTFQHVGKAVNQGKIFK 437          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1GA_XENLA (Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-A PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.339e-15
Identity = 38/114 (33.33%), Postives = 69/114 (60.53%), Query Frame = -2
Query:  238 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECY--DMELYDWKKADISDEEQKERVNQMIEDHEPFEGE 573
            +D EG+S+W+ +YK+ +E T +F++ N ++G  QR+D  RK  F  +++ G      + G+W+FRG ++  F + E +  D E Y+W+K D   EE K     +++++  +EGE
Sbjct:  313 FDKEGWSIWYAEYKFPEELTQAFMSCNLITGMFQRLDKLRKTGFASVILFGTNNNSSISGVWVFRGQDL-AFTLSEDWQIDYESYNWRKLDSGSEECK----TLVKEYFAWEGE 421          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.748e-15
Identity = 41/124 (33.06%), Postives = 67/124 (54.03%), Query Frame = -2
Query:  211 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 573
            +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D   EE +  V +       F+  G+A    K FK
Sbjct:  314 FDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_HUMAN (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 1.748e-15
Identity = 41/124 (33.06%), Postives = 67/124 (54.03%), Query Frame = -2
Query:  211 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 573
            +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D   EE +  V +       F+  G+A    K FK
Sbjct:  314 FDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.748e-15
Identity = 41/124 (33.06%), Postives = 67/124 (54.03%), Query Frame = -2
Query:  211 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 573
            +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+      D   D E Y W+K D   EE +  V +       F+  G+A    K FK
Sbjct:  314 FDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEEAQTLVREYFSWEGAFQHVGKAFNQGKIFK 437          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_RAT (Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 2.283e-15
Identity = 40/124 (32.26%), Postives = 68/124 (54.84%), Query Frame = -2
Query:  211 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFE--GEALLDAKCFK 573
            +D +G+SLW+ +Y++ +E T +F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG ++      D   D E Y W+K D   EE +  V +       F+  G+A+   K FK
Sbjct:  314 FDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQDLAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAVNQGKIFK 437          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_CAEEL (Probable elongation factor 1-gamma OS=Caenorhabditis elegans GN=F17C11.9 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.982e-15
Identity = 36/122 (29.51%), Postives = 68/122 (55.74%), Query Frame = -2
Query:  211 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 573
            +D + +S+W C+YKY ++ T++F++ N ++G  QR++  +K AF  M++ G +    + G+W+++G ++  +   D   D E Y W K D   +  K+ VN+ +     F G+     K FK
Sbjct:  277 FDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEGDFGGKKFNQGKIFK 398          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G1_YEAST (Elongation factor 1-gamma 1 OS=Saccharomyces cerevisiae GN=CAM1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.982e-15
Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = -2
Query:  211 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPE-IPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPF----EGEALLDAKCFK 573
            Y+PE YSLW   YKYNDE T++F++ N V GF  R+  + KY FG +++ G      + G  + RG + +P F  D   D E YD+ K D ++++ KE +N M    +P     E + ++D K  K
Sbjct:  292 YNPEEYSLWKVTYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDYVPAF--DVAPDWESYDYAKLDPTNDDDKEFINNMWAWDKPVSVNGEPKEIVDGKVLK 415          
The following BLAST results are available for this feature:
BLAST of DN617575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
EF1G_RABIT4.601e-1633.87Elongation factor 1-gamma OS=Oryctolagus cuniculus... [more]
EF1G_ARTSA7.848e-1635.58Elongation factor 1-gamma OS=Artemia salina PE=1 S... [more]
EF1G_MOUSE1.025e-1533.06Elongation factor 1-gamma OS=Mus musculus GN=Eef1g... [more]
EF1GA_XENLA1.339e-1533.33Elongation factor 1-gamma-A OS=Xenopus laevis GN=e... [more]
EF1G_MACFA1.748e-1533.06Elongation factor 1-gamma OS=Macaca fascicularis G... [more]
EF1G_HUMAN1.748e-1533.06Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G... [more]
EF1G_HORSE1.748e-1533.06Elongation factor 1-gamma OS=Equus caballus GN=EEF... [more]
EF1G_RAT2.283e-1532.26Elongation factor 1-gamma OS=Rattus norvegicus GN=... [more]
EF1G_CAEEL2.982e-1529.51Probable elongation factor 1-gamma OS=Caenorhabdit... [more]
EF1G1_YEAST2.982e-1536.51Elongation factor 1-gamma 1 OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617575 ID=DN617575; Name=DN617575; organism=Citrus sinensis; type=EST; length=580bp
AAAATTTAAGTATATACATTCAAGAACCATTGAAACTTGTATTAAAAAGA
TGTCCAAATCATCCTCAAAATTGCGACAAAATTATAAGTTAATACTATAA
CACAAAATACTAGACTTCGATCTTTCTGAATTCGAAACACAAACAAACTC
TACCAATAACCAAAGACAAACATGAACATCTTAAAACTAGAAAAAAGATT
AAGCTCATCACTTGAAGCACTTAGCATCCAAAAGAGCTTCACCCTCAAAA
GGCTCGTGATCCTCGATCATCTGGTTCACACGTTCCTTTTGCTCTTCGTC
TGAGATGTCAGCCTTCTTCCAGTCATACAATTCCATGTCATAGCACTCAT
CCATGACGAATTTAGGAATTTCTGGGCCACGGAAGAGCCACAACCCCTTG
ACTTTGTATGGAGGCTCGTTGCCGATAATTAGCATCTTTCCAAACGCATA
CTTGCGAGCCAGATCCATCCTCTGAAGAAACCCACTAACCTTGTTCAAGG
TCACGAATGACACAGTATTCTCGTCATTGTATTTGTAATCACAGAACCAA
AGTGAGTAACCCTCAGGATCATACATGTCC
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