DN617571

Overview
NameDN617571
Unique NameDN617571
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig539 contig Csv1_Contig539:59..685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H33_CAPAN (Histone H3.3 OS=Capsicum annuum PE=2 SV=3)

HSP 1 Score: 266.159 bits (679), Expect = 1.026e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H33_ARATH (Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.026e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H33A_LILLO (Histone H3.3a OS=Lilium longiflorum GN=MPH3 PE=2 SV=3)

HSP 1 Score: 261.922 bits (668), Expect = 1.936e-69
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST+LLIRKLPFQRLVREIAQD+K DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDYKADLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H3_URECA (Histone H3 OS=Urechis caupo PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 3.651e-68
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H3_TIGCA (Histone H3 OS=Tigriopus californicus PE=3 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 3.651e-68
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H3_PLADU (Histone H3 OS=Platynereis dumerilii PE=3 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 3.651e-68
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H3_DROME (Histone H3 OS=Drosophila melanogaster GN=His3 PE=1 SV=4)

HSP 1 Score: 257.684 bits (657), Expect = 3.651e-68
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H3_DROHY (Histone H3 OS=Drosophila hydei GN=His3 PE=3 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 3.651e-68
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H3_CHITH (Histone H3 OS=Chironomus thummi thummi PE=3 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 3.651e-68
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DN617571 vs. ExPASy Swiss-Prot
Match: H32_XENTR (Histone H3.2 OS=Xenopus tropicalis GN=TGas081o10.1 PE=2 SV=3)

HSP 1 Score: 257.684 bits (657), Expect = 3.651e-68
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 3 
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 440
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of DN617571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
H33_CAPAN1.026e-70100.00Histone H3.3 OS=Capsicum annuum PE=2 SV=3[more]
H33_ARATH1.026e-70100.00Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 ... [more]
H33A_LILLO1.936e-6997.79Histone H3.3a OS=Lilium longiflorum GN=MPH3 PE=2 S... [more]
H3_URECA3.651e-6896.32Histone H3 OS=Urechis caupo PE=1 SV=2[more]
H3_TIGCA3.651e-6896.32Histone H3 OS=Tigriopus californicus PE=3 SV=2[more]
H3_PLADU3.651e-6896.32Histone H3 OS=Platynereis dumerilii PE=3 SV=2[more]
H3_DROME3.651e-6896.32Histone H3 OS=Drosophila melanogaster GN=His3 PE=1... [more]
H3_DROHY3.651e-6896.32Histone H3 OS=Drosophila hydei GN=His3 PE=3 SV=2[more]
H3_CHITH3.651e-6896.32Histone H3 OS=Chironomus thummi thummi PE=3 SV=2[more]
H32_XENTR3.651e-6896.32Histone H3.2 OS=Xenopus tropicalis GN=TGas081o10.1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617571 ID=DN617571; Name=DN617571; organism=Citrus sinensis; type=EST; length=637bp
ATTTTGCAGTTTGTGTTGGTGATTAAAGAGTAATGGCCCGTACGAAGCAA
ACCGCGCGCAAGTCAACTGGAGGAAAGGCTCCGAGGAAGCAGCTCGCCAC
AAAGGCTGCAAGAAAATCTGCTCCAACAACTGGTGGAGTCAAGAAGCCCC
ATCGTTACCGTCCAGGAACTGTCGCCCTACGTGAAATCCGCAAATATCAA
AAGAGCACTGAGCTTTTGATCCGCAAGCTGCCTTTCCAGCGGCTGGTTCG
TGAAATTGCTCAAGATTTCAAGACAGATTTGAGGTTCCAAAGCCACGCGG
TTCTTGCGCTGCAGGAAGCGGCAGAGGCTTATCTCGTGGGTCTGTTCGAG
GACACCAACCTTTGTGCTATCCATGCCAAGCGAGTCACCATTATGCCCAA
GGATATTCAACTGGCAAGGCGAATCCGAGGCGAGCGTGCTTAATTTGTGA
TTCCTTAGGTAGTCGTCAGTTTCCTATTTAGTTTGCTAGTTTTTCTTTAT
TTCGGTTTTTACATGTAAAGAATGATATGATGGATTGAAGAATATTTGGC
ATTTGATATTTGCTAGATAAATGTTTATTGTGGAGCTTATCTTGTTTCAC
TTTACCTTCATCGGTGGTTTTAAGGACTTGCGTGTAT
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