DN617570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H3L1_LILLO (Histone H3-like 1 OS=Lilium longiflorum GN=gH3 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 2.806e-20 Identity = 55/132 (41.67%), Postives = 80/132 (60.61%), Query Frame = -2 Query: 226 KQTARKSTGGKAPRKQLATKAARK--SAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 615 +Q + +APR Q + ++ +AP ++P R+RPGTVALREIR+ Q+S LI PF RLVRE+A +F D RF + + L+E E LV F + +C+IHAKR+ I KD +LA+ ++GE Sbjct: 20 RQQPTEEPQDEAPRNQGRQQQQQRPPAAP-----RRPRRFRPGTVALREIRRIQRSNVPLIPHSPFMRLVRELAAEFLDDCRFAAETFIMLKEVVEDELVNHFGNVQICSIHAKRIIITVKDFKLAKLLKGE 146
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H3L2_LILLO (Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE=2 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.953e-17 Identity = 53/101 (52.48%), Postives = 61/101 (60.40%), Query Frame = -2 Query: 328 MARTKQTARKSTGGKAPRKQLATKAARKS-APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY 627 MAR K TAR STGGKAPRKQLA+KA RK+ P T GVK+P G RKLPFQ LVR+I QD KT LRF++H+V L+E E Y Sbjct: 1 MARMKHTARMSTGGKAPRKQLASKALRKAPPPPTKGVKQPTTTTSGKWRFARFH----------RKLPFQGLVRKIWQDLKTHLRFKNHSVPPLEEVTEVY 91
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H32_TETTR (Histone H3.2 (Fragment) OS=Tetrahymena tropicalis PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = -2 Query: 505 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 627 MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H32_TETSO (Histone H3.2 (Fragment) OS=Tetrahymena sonneborni PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = -2 Query: 505 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 627 MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H32_TETRO (Histone H3.2 (Fragment) OS=Tetrahymena rostrata PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = -2 Query: 505 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 627 MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H32_TETPR (Histone H3.2 (Fragment) OS=Tetrahymena paravorax PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = -2 Query: 505 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 627 MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H32_TETPI (Histone H3.2 (Fragment) OS=Tetrahymena pigmentosa PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = -2 Query: 505 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 627 MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H32_TETPA (Histone H3.2 (Fragment) OS=Tetrahymena patula PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = -2 Query: 505 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 627 MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H32_TETNI (Histone H3.2 (Fragment) OS=Tetrahymena nippisingi PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = -2 Query: 505 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 627 MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41
BLAST of DN617570 vs. ExPASy Swiss-Prot
Match: H32_TETNA (Histone H3.2 (Fragment) OS=Tetrahymena nanneyi PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14 Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = -2 Query: 505 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 627 MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHR 41 The following BLAST results are available for this feature:
BLAST of DN617570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617570 ID=DN617570; Name=DN617570; organism=Citrus sinensis; type=EST; length=631bpback to top |