DN617569

Overview
NameDN617569
Unique NameDN617569
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_YEAST (Cytochrome b5 OS=Saccharomyces cerevisiae GN=CYB5 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 27/56 (48.21%), Postives = 42/56 (75.00%), Query Frame = -2
Query:  473 KVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSST 640
            KVYDV++F D+HPGGDE+++   G+DAT+ F D+GHS  A  ++   Y+GD+D ++
Sbjct:   26 KVYDVSQFKDEHPGGDEIIMDLGGQDATESFVDIGHSDEALRLLKGLYIGDVDKTS 81          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_ALOSE (Cytochrome b5 (Fragment) OS=Alouatta seniculus GN=CYB5A PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = -2
Query:  485 KVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 640
            KVYD+TKFL++HPGG+EVL    G DAT+DFEDVGHS+ A+ +   + +G++
Sbjct:   29 KVYDLTKFLEEHPGGEEVLREQAGGDATEDFEDVGHSTDARELSKTYIIGEL 80          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB51_SCHPO (Probable cytochrome b5 1 OS=Schizosaccharomyces pombe GN=SPBC29A10.16c PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 28/57 (49.12%), Postives = 42/57 (73.68%), Query Frame = -2
Query:  473 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSST 643
            GKVYDV+ F DDHPGG +++L   G+DAT  ++D+GHS +A  +++E Y+GD+   T
Sbjct:   26 GKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDIGHSIAADELLEEMYIGDLKPGT 82          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_NEUCR (Probable cytochrome b5 OS=Neurospora crassa GN=B23L21.190 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = -2
Query:  485 KVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 640
            KVYD+TKF+D+HPGG+EVLL   G+D+T+ FEDVGHS  A+  ++   VG +
Sbjct:   26 KVYDITKFVDEHPGGEEVLLDVAGQDSTEAFEDVGHSDEAREALEPLLVGTL 77          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_RABIT (Cytochrome b5 OS=Oryctolagus cuniculus GN=CYB5A PE=1 SV=4)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = -2
Query:  485 KVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 640
            KVYD+TKFL++HPGG+EVL    G DAT++FEDVGHS+ A+ +   F +G++
Sbjct:   33 KVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGEL 84          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_PIG (Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = -2
Query:  485 KVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 640
            KVYD+TKFL++HPGG+EVL    G DAT++FEDVGHS+ A+ +   F +G++
Sbjct:   33 KVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGEL 84          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_BOVIN (Cytochrome b5 OS=Bos taurus GN=CYB5A PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = -2
Query:  485 KVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 640
            KVYD+TKFL++HPGG+EVL    G DAT++FEDVGHS+ A+ +   F +G++
Sbjct:   33 KVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGEL 84          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11
Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = -2
Query:  476 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 643
            GKVYD T +LD+HPGG E +L   G DATD+F  + HSS AKAM+ ++Y+GD+ +S
Sbjct:  520 GKVYDATPYLDEHPGGAESILIVAGADATDEFNSI-HSSKAKAMLAQYYIGDLVAS 574          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.897e-11
Identity = 24/58 (41.38%), Postives = 44/58 (75.86%), Query Frame = -2
Query:  470 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTV 643
            GKVY+++ ++D+HPGG+EV+L   G DAT+ F+D+GHS  A  ++++ Y+G++  + +
Sbjct:   31 GKVYNISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNLKGAKI 88          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_RAT (Cytochrome b5 OS=Rattus norvegicus GN=Cyb5a PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11
Identity = 28/52 (53.85%), Postives = 41/52 (78.85%), Query Frame = -2
Query:  485 KVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 640
            KVYD+TKFL++HPGG+EVL    G DAT++FEDVGHS+ A+ +   + +G++
Sbjct:   33 KVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGEL 84          
The following BLAST results are available for this feature:
BLAST of DN617569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CYB5_YEAST6.521e-1248.21Cytochrome b5 OS=Saccharomyces cerevisiae GN=CYB5 ... [more]
CYB5_ALOSE6.521e-1255.77Cytochrome b5 (Fragment) OS=Alouatta seniculus GN=... [more]
CYB51_SCHPO6.521e-1249.12Probable cytochrome b5 1 OS=Schizosaccharomyces po... [more]
CYB5_NEUCR8.516e-1255.77Probable cytochrome b5 OS=Neurospora crassa GN=B23... [more]
CYB5_RABIT1.112e-1155.77Cytochrome b5 OS=Oryctolagus cuniculus GN=CYB5A PE... [more]
CYB5_PIG1.112e-1155.77Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3[more]
CYB5_BOVIN1.112e-1155.77Cytochrome b5 OS=Bos taurus GN=CYB5A PE=1 SV=3[more]
NIA_VOLCA1.453e-1155.36Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
CYB5_CANTR1.897e-1141.38Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
CYB5_RAT2.478e-1153.85Cytochrome b5 OS=Rattus norvegicus GN=Cyb5a PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617569 ID=DN617569; Name=DN617569; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTTTTACGAGAAAGGAAGCCCAAAGGCCATTTGGACAATTGGT
GCTTTCCCCCCTTTATTTTAGATGAAGATGCATAAGAATAAAAATGAAAG
CAAAGCCAAAACGAGGAACTGCAAATAGATCATTGCATTCCAAGTCATGC
GGGCAGTGAATGGTCACTTATCAAACACAAGCACATGACATCAAAAAAGA
TAAAGAACCCTACATTTTCTGGTGATAATAGTTCCAAACAACTAGTAAAA
ACAAGGTGCAATGCAACGGATATAGATTTATTGTAAATGTTTCTCCAATT
TTTATCTTGCAAGGTATCATTAAGCGGATTTGGTATAGAAGCGGATGCCA
ACAGCCAATCCTAAGATTAGCAGAGGAACTAGGAACTGGAGGAGCTTTAT
AATAAACTCGGGTGTCTTGTCTTGGTTGTAGTGAGGCTGCTTGGGAGGGG
TGTACTTGGTCTTGGTGGGAACGGTTGATGAATCAATGTCACCCACATAG
AATTCATCCATCATCGCTTTTGCACTGCTACTGTGACCAACATCCTCAAA
GTCGTCAGTCGCATCCTTTCCTGTGGCAGACAACAATACCTCGTCTCCAC
CAGGATGGTCATCCAAGAATTTTGTCACATCATATACCTTGCCC
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