DN617568

Overview
NameDN617568
Unique NameDN617568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length618
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.724e-14
Identity = 31/80 (38.75%), Postives = 53/80 (66.25%), Query Frame = 3
Query:   69 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 308
            M    K+Y+++EV  HN  +  W+I+ G +YD T+FL DHPGG + +L   G D T++FE + HS  AK +++++ +G++
Sbjct:  535 MNTSAKMYSMSEVRKHNSVESAWIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 613          
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.864e-14
Identity = 32/80 (40.00%), Postives = 52/80 (65.00%), Query Frame = 3
Query:   69 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 308
            M    K+Y+++EV  HN     W+I+ G VYD T+FL DHPGG + +L   G D T++F+ + HS  AK ++++F +G++
Sbjct:  531 MNTASKMYSMSEVKKHNSADSAWIIVHGHVYDATRFLKDHPGGIDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 609          
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.352e-14
Identity = 31/83 (37.35%), Postives = 54/83 (65.06%), Query Frame = 3
Query:   69 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 317
            M    K+Y+++EV  HN     W+++ G VY+ T+FL DHPGG + +L   G D T++F+ + HS  AK ++++F +G++ S+
Sbjct:  547 MNTTSKMYSMSEVKKHNTADSAWIVVHGNVYNATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKRLLEDFRIGELIST 628          
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.352e-14
Identity = 31/80 (38.75%), Postives = 52/80 (65.00%), Query Frame = 3
Query:   69 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 308
            M    K+Y+++EV  H+     W+I+ G +YD T+FL DHPGG + +L   G D T++F+ + HS  AK +++EF +G++
Sbjct:  527 MNTASKMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKKLLEEFRIGEL 605          
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA1_ORYSJ (Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. japonica GN=NIA1 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 31/77 (40.26%), Postives = 52/77 (67.53%), Query Frame = 3
Query:   78 EGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 308
            +GK +T++EV  H+ +   W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS  AKA++D + +G++
Sbjct:  540 DGKQFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKALLDTYRIGEL 615          
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 31/80 (38.75%), Postives = 52/80 (65.00%), Query Frame = 3
Query:   69 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 308
            M    K+Y+++EV  HN     W+I+ G +YD T+FL DHPGG + +L   G D T++FE + HS  AK +++++ +G++
Sbjct:  541 MNTASKMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 619          
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA2_HORVU (Nitrate reductase [NADH] (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13
Identity = 32/83 (38.55%), Postives = 54/83 (65.06%), Query Frame = 3
Query:   60 FLQMGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 308
            F+   G+ K +T++EV  H  ++  W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS  AKA++D + +G++
Sbjct:  529 FMNTAGD-KQFTMSEVRKHGSKESAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEFDAI-HSDKAKALLDTYRIGEL 609          
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13
Identity = 32/83 (38.55%), Postives = 54/83 (65.06%), Query Frame = 3
Query:   60 FLQMGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 308
            F+   G+ K +T++EV  H  ++  W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS  AKA++D + +G++
Sbjct:  532 FMNTAGD-KQFTMSEVRKHGSKESAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEFDAI-HSDKAKALLDTYRIGEL 612          
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = 3
Query:   69 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 308
            M    K+++++EV  HN  +  W+I+ G +YD T FL DHPGG + +L   G D T++F+ + HS  AK M++++ +G++
Sbjct:  524 MNTSSKMFSMSEVKKHNSAESAWIIVHGHIYDCTHFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL 602          
BLAST of DN617568 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = 3
Query:   69 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 308
            M    K+Y+++EV  H+     W+I+ G +YD T+FL DHPGG + +L   G D T++F+ + HS  AK ++++F +G++
Sbjct:  527 MNTASKMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 605          
The following BLAST results are available for this feature:
BLAST of DN617568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
NIA2_BRANA3.724e-1438.75Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA_PETHY4.864e-1440.00Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA_SPIOL6.352e-1437.35Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA1_TOBAC6.352e-1438.75Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA1_ORYSJ8.296e-1440.26Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. ... [more]
NIA1_ARATH8.296e-1438.75Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NIA2_HORVU1.415e-1338.55Nitrate reductase [NADH] (Fragment) OS=Hordeum vul... [more]
NIA1_HORVU1.415e-1338.55Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
NIA_BETVE1.848e-1337.50Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]
NIA2_TOBAC1.848e-1337.50Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617568 ID=DN617568; Name=DN617568; organism=Citrus sinensis; type=EST; length=618bp
CTGGTACTCACCTACTGGGGCATAAAAGTTTCAAGCTTTTCCCTTAAAAA
TCTCACCTTTTTTTACAAATGGGCGGAGAGGGCAAGGTATACACTTTGGC
TGAGGTCTCTGGGCACAACGACCGCAAGGACTGTTGGCTTATCATTGAGG
GCAAGGTATATGATGTGACAAAATTCTTGGATGACCATCCTGGTGGAGAC
GAGGTATTGTTGTCTGCCACAGGAAAGGATGCGACTGACGACTTTGAGGA
TGTTGGTCACAGTAGCAGTGCAAAAGCGATGATGGATGAATTCTATGTGG
GTGACATTGATTCATCAACCGTTCCCACCAAGACCAAGTACACCCCTCCC
AAGCAGCCTCACTACAACCAAGACAAGACACCCGAGTTTATTATAAAGCT
CCTCCAGTTCCTAGTTCCTCTGCTAATCTTAGGATTGGCTGTTGGCATCC
GCTTCTATACCAAATCCGCTTAATGATACCTTGCAAGATAAAAATTGGAG
AAACATTTACAATAAATCTATATCCGTTGCATTGCACCTTGTTTTTACTA
GTTGTTTGGAACTATTATCACCAGAAAATGTAGGGTTCTTTATCTTTTTT
GATGTCATGTGCTTGTGT
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