DN617560

Overview
NameDN617560
Unique NameDN617560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617560_ssr29 microsatellite DN617560_ssr29:29..40. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5775 contig Csv1_Contig5775:89..645. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617560 vs. ExPASy Swiss-Prot
Match: YJEFN_DROVI (YjeF N-terminal domain-containing protein GJ19543 OS=Drosophila virilis GN=GJ19543 PE=4 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 2.821e-28
Identity = 68/148 (45.95%), Postives = 90/148 (60.81%), Query Frame = 1
Query:  115 VSHLTQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEAYKASEYDRVLAICGPGNNGGDGLVAARQLYHFGYKPFVCYPKRTQKPLYTGLVTQLESLSIPFLSVEDLPL--DFSKDFDIIVYAMFGFSFHGTPRPPFDDLIKRL 552
            + +L Q EA  +D  L     FSVDQLMELAGLS A ++A+ + A ++ RVL  CGPGNNGGDGLV AR L   GY P + YPK T KPLY  L  Q + + I   S+ + P   + +  +D+IV A+FGFSF    R  F  +++ L
Sbjct:    2 LKYLNQSEAINVDLELFNEYKFSVDQLMELAGLSCAHAVAKCFPAKDFARVLVCCGPGNNGGDGLVCARHLALMGYTPAIYYPKPTPKPLYENLAHQCQRMEI--CSITECPRVEEAADSYDLIVDALFGFSFKPPVRADFVSVVELL 147          
BLAST of DN617560 vs. ExPASy Swiss-Prot
Match: YJEFN_DROMO (YjeF N-terminal domain-containing protein GI11178 OS=Drosophila mojavensis GN=GI11178 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.072e-27
Identity = 68/146 (46.58%), Postives = 87/146 (59.59%), Query Frame = 1
Query:  115 VSHLTQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEAYKASEYDRVLAICGPGNNGGDGLVAARQLYHFGYKPFVCYPKRTQKPLYTGLVTQLESLSIPFLSVEDLPLDFSKDFDIIVYAMFGFSFHGTPRPPFDDLIKRL 552
            + +L Q EA  +D  L     FSVDQLMELAGLS A +IA+ + A  + RVL  CGPGNNGGDGLV AR L   GY P + YPK T KPLY  L  Q + + I  +S        ++ +D+IV A+FGFSF    R  F  +++ L
Sbjct:    2 LKYLNQSEAINVDLELFNEYKFSVDQLMELAGLSCAHAIAKCFPADRFGRVLVCCGPGNNGGDGLVCARHLALMGYLPVLYYPKPTPKPLYENLAHQCKRMEIESISECPSVALAAECYDLIVDALFGFSFKPPVRADFVPVVELL 147          
BLAST of DN617560 vs. ExPASy Swiss-Prot
Match: YJEFN_DROER (YjeF N-terminal domain-containing protein GG18945 OS=Drosophila erecta GN=GG18945 PE=4 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.072e-27
Identity = 65/141 (46.10%), Postives = 90/141 (63.83%), Query Frame = 1
Query:  115 VSHLTQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEAYKASEYDRVLAICGPGNNGGDGLVAARQLYHFGYKPFVCYPKRTQKPLYTGLVTQLESLSIPFLSVEDLPL--DFSKDFDIIVYAMFGFSFHGTPRPPF 531
            + +L Q+EA ++D+ L     FSVDQLMELAGLS A ++A+ + A ++ R+L  CGPGNNGGDGLVAAR L   GY P + YPK T KPL+  L  Q + + I    V++ P     + ++D+I+ A+FGFSF    R  F
Sbjct:    3 LKYLNQKEAIDVDQELFTEYKFSVDQLMELAGLSCAHAVAKCFPAEKHPRILVCCGPGNNGGDGLVAARHLSLMGYTPTIYYPKPTAKPLFENLSHQCQMMGI--CGVKECPSVESAAANYDLILDALFGFSFKPPVRADF 141          
BLAST of DN617560 vs. ExPASy Swiss-Prot
Match: YJEFN_DROPS (YjeF N-terminal domain-containing protein GA15549 OS=Drosophila pseudoobscura pseudoobscura GN=GA15549 PE=4 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.400e-27
Identity = 68/146 (46.58%), Postives = 86/146 (58.90%), Query Frame = 1
Query:  115 VSHLTQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEAYKASEYDRVLAICGPGNNGGDGLVAARQLYHFGYKPFVCYPKRTQKPLYTGLVTQLESLSIPFLSVEDLPLDFSKDFDIIVYAMFGFSFHGTPRPPFDDLIKRL 552
            V +L+Q EA E+D  L     F V QLMELAGLS A ++AE + A  + RVL +CGPGNNGGDGLV AR L   GY+P V YPK T   LY  L  Q   + IP +       D  +D+D+I+ A+FGF F    R  F  L+K +
Sbjct:    2 VKYLSQSEAIELDLDLFEM--FHVGQLMELAGLSCADAVAECFPAQTHPRVLVVCGPGNNGGDGLVCARHLSLMGYQPTVYYPKPTLMSLYENLTNQCHHMEIPSVKKCPSVSDAEEDYDLILDALFGFGFKPPVREDFVPLVKMM 145          
BLAST of DN617560 vs. ExPASy Swiss-Prot
Match: YJEFN_DROPE (YjeF N-terminal domain-containing protein GL16587 OS=Drosophila persimilis GN=GL16587 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.400e-27
Identity = 71/148 (47.97%), Postives = 89/148 (60.14%), Query Frame = 1
Query:  115 VSHLTQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEAYKASEYDRVLAICGPGNNGGDGLVAARQLYHFGYKPFVCYPKRTQKPLYTGLVTQLESLSIPFLSVEDLP--LDFSKDFDIIVYAMFGFSFHGTPRPPFDDLIKRL 552
            V +L+Q EA E+D  L     F V QLMELAGLS A ++AE + A  + RVL +CGPGNNGGDGLV AR L   GY+P V YPK T   LY  L  Q   + IP  SV+  P   D  +D+D+I+ A+FGF F    R  F  L+K +
Sbjct:    2 VKYLSQSEAIELDLDLFEM--FHVGQLMELAGLSCADAVAECFPAQTHPRVLVVCGPGNNGGDGLVCARHLSLMGYQPTVYYPKPTLMSLYENLTNQCHHMEIP--SVKKCPSLSDAEEDYDLILDALFGFGFKPPVREDFVPLVKMM 145          
BLAST of DN617560 vs. ExPASy Swiss-Prot
Match: YJEFN_DROGR (YjeF N-terminal domain-containing protein GH12525 OS=Drosophila grimshawi GN=GH12525 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.119e-27
Identity = 67/148 (45.27%), Postives = 88/148 (59.46%), Query Frame = 1
Query:  115 VSHLTQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEAYKASEYDRVLAICGPGNNGGDGLVAARQLYHFGYKPFVCYPKRTQKPLYTGLVTQLESLSIPFLSVEDLPL--DFSKDFDIIVYAMFGFSFHGTPRPPFDDLIKRL 552
            V +L Q+EA  +D  L     FSVDQLMELAGLS A +I + + A  + RVL  CGPGNNGGDGLV AR L   GY P + YPK T KPL+  L  Q + + I    +++ P     +  +D+IV A+FGFSF    R  F  +++ L
Sbjct:    2 VKYLNQKEAINVDLELFNEYKFSVDQLMELAGLSCAHAITKCFPADRFGRVLVCCGPGNNGGDGLVCARHLALMGYTPAIYYPKPTAKPLFENLSHQCQRMEI--CRIDECPTVETSANSYDLIVDALFGFSFKPPVRVDFVPVVELL 147          
BLAST of DN617560 vs. ExPASy Swiss-Prot
Match: YJEFN_DROWI (YjeF N-terminal domain-containing protein GK25285 OS=Drosophila willistoni GN=GK25285 PE=4 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 6.504e-25
Identity = 67/148 (45.27%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  115 VSHLTQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEAY---------KASEYDRVLAICGPGNNGGDGLVAARQLYHFGYKPFVCYPKRTQKPLYTGLVTQLESLSIPFLSVEDLPLDFSKDFDIIVYAMFGFSFHGTPRPPF 531
            + +L Q EA ++D+ L     FSVDQLMELAGLS A ++A+ +         KA +  RVL  CGPGNNGGDGLV AR L   GY+P + YPK T KPLY  L  Q E + I  +S      + +  + +IV A+FGFSF    R  F
Sbjct:    2 LKYLNQAEAIKVDQILFNEYKFSVDQLMELAGLSCAHAVAKCFPSPCQGNDDKAGKL-RVLVCCGPGNNGGDGLVCARHLALMGYEPTIYYPKPTAKPLYENLHHQCELMEISTISQCPSVEEAAHSYHLIVDALFGFSFKPPVRSDF 148          
BLAST of DN617560 vs. ExPASy Swiss-Prot
Match: YNU0_YEAST (Uncharacterized protein YNL200C OS=Saccharomyces cerevisiae GN=YNL200C PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.602e-23
Identity = 68/154 (44.16%), Postives = 92/154 (59.74%), Query Frame = 1
Query:  124 LTQREAAEIDETLMGP-LGFSVDQLMELAGLSVATSIAEAY------KASEYDRVLAICGPGNNGGDGLVAARQLYHFGYKPFVCYPKRTQK-PLYTGLVTQLESLSIPFLSVEDLP-LDFSKDFD--IIVYAMFGFSFHGTPRPPFDDLIKRL 552
            ++ + AAEID+ LMGP +GF++ QLMELAG SVA ++   +      +  +   V  I GPGNNGGDGLV AR L  FGY P V YPKR+++   Y  LV QL    +P LS ++   L++ K      IV A+FGFSF    R PF  +++ L
Sbjct:    7 VSSKLAAEIDKELMGPQIGFTLQQLMELAGFSVAQAVCRQFPLRGKTETEKGKHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPVLSQDEGNWLEYLKPEKTLCIVDAIFGFSFKPPMREPFKGIVEEL 160          
BLAST of DN617560 vs. ExPASy Swiss-Prot
Match: YJEN3_HUMAN (YjeF N-terminal domain-containing protein 3 OS=Homo sapiens GN=YJEFN3 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  136 EAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEAYKASEYDR----VLAICGPGNNGGDGLVAARQLYHFGYKPFVCYPKRTQKPLYTGLVTQLESLSIPFLSVEDLPLD---FSKDFDIIVYAMFG 498
            EAA ++  L+    F   QL+EL G + A ++ +A+      R    VL +CGP  NG  GLV AR L  F Y+P + YP R+   L+  L TQ E + IPFLS   LP +    ++ + ++V A+ G
Sbjct:   73 EAAALERELLEDYRFGRQQLVELCGHASAVAVTKAFPLPALSRKQRTVLVVCGPEQNGAVGLVCARHLRVFEYEPTIFYPTRSLDLLHRDLTTQCEKMDIPFLSY--LPTEVQLINEAYGLVVDAVLG 198          
The following BLAST results are available for this feature:
BLAST of DN617560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
YJEFN_DROVI2.821e-2845.95YjeF N-terminal domain-containing protein GJ19543 ... [more]
YJEFN_DROMO1.072e-2746.58YjeF N-terminal domain-containing protein GI11178 ... [more]
YJEFN_DROER1.072e-2746.10YjeF N-terminal domain-containing protein GG18945 ... [more]
YJEFN_DROPS1.400e-2746.58YjeF N-terminal domain-containing protein GA15549 ... [more]
YJEFN_DROPE1.400e-2747.97YjeF N-terminal domain-containing protein GL16587 ... [more]
YJEFN_DROGR3.119e-2745.27YjeF N-terminal domain-containing protein GH12525 ... [more]
YJEFN_DROWI6.504e-2545.27YjeF N-terminal domain-containing protein GK25285 ... [more]
YNU0_YEAST1.602e-2344.16Uncharacterized protein YNL200C OS=Saccharomyces c... [more]
YJEN3_HUMAN1.503e-1336.72YjeF N-terminal domain-containing protein 3 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617560 ID=DN617560; Name=DN617560; organism=Citrus sinensis; type=EST; length=557bp
CCCTGTCTCTCCTCTCGTCTCCAACCAGTCCTCCTCCTCCTCTTTTCAGC
TCCCGCAATTCGTGCGTTTTGCTCAAAATCAGACGCAATGTCGTCGGCAC
AAAATTCCGATTCTGTATCTCATCTCACTCAGCGAGAAGCTGCCGAAATT
GATGAGACTCTCATGGGACCTCTCGGCTTCAGTGTCGATCAGCTTATGGA
ATTGGCTGGTTTGAGTGTAGCAACATCCATAGCAGAGGCTTACAAAGCAA
GTGAATATGATCGTGTGCTTGCGATATGCGGTCCGGGGAACAATGGAGGT
GATGGTTTGGTAGCTGCTCGACAGCTGTATCATTTTGGATACAAGCCGTT
TGTCTGTTATCCAAAGCGTACTCAAAAACCACTTTATACTGGTCTGGTTA
CACAGCTTGAATCGCTATCAATCCCTTTCCTGTCAGTGGAGGATCTACCA
TTGGACTTTTCAAAGGACTTCGATATCATCGTATATGCAATGTTTGGGTT
CTCCTTTCATGGAACCCCAAGGCCACCGTTTGATGATCTGATTAAGAGAC
TGCTTTG
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