DN617556

Overview
NameDN617556
Unique NameDN617556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length535
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617556_ssr133 microsatellite DN617556_ssr133:133..144. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5733 contig Csv1_Contig5733:1..543. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 6.946e-50
Identity = 93/114 (81.58%), Postives = 101/114 (88.60%), Query Frame = 3
Query:  192 HGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            HG LD QIE LM+CKPLPE EV+ LC++A+ IL+EE NVQPVK PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  RITILRGNHES
Sbjct:    5 HGGLDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 118          
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.185e-49
Identity = 93/113 (82.30%), Postives = 101/113 (89.38%), Query Frame = 3
Query:  195 GDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            G LD QIE LMEC+PL E EVKTLC++A+ IL+EE NVQPVK PVT+CGDIHGQF+DL+ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  RITILRGNHES
Sbjct:   14 GGLDAQIEQLMECRPLSETEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 126          
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSJ (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 1.547e-49
Identity = 93/113 (82.30%), Postives = 101/113 (89.38%), Query Frame = 3
Query:  195 GDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            G LD QIE LMEC+PL E EVKTLC++A+ IL+EE NVQPVK PVT+CGDIHGQF+DL+ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  RITILRGNHES
Sbjct:   13 GGLDAQIEQLMECRPLSEPEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 125          
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.880e-49
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 3
Query:  189 SHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            SHG+LD QI  LM+CKPL E EV+ LC++A+ IL+EE NVQPVK PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  RITILRGNHES
Sbjct:    9 SHGNLDEQIAQLMQCKPLSEQEVRGLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 123          
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2AA_DICDI (Serine/threonine-protein phosphatase 2A catalytic subunit A OS=Dictyostelium discoideum GN=pho2A PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.978e-48
Identity = 88/112 (78.57%), Postives = 102/112 (91.07%), Query Frame = 3
Query:  198 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            D+D+ I  L ECKPL E+EV+ LC++AR IL +E NVQPV+CPVTVCGDIHGQF+DL+ELF+IGGN PDTNYLFMGDYVDRG+YSVETVTLLVALKVRY+DR+TILRGNHES
Sbjct:    6 DVDKYISILKECKPLSESEVRDLCEKAREILSKESNVQPVRCPVTVCGDIHGQFHDLMELFKIGGNCPDTNYLFMGDYVDRGFYSVETVTLLVALKVRYKDRVTILRGNHES 117          
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A_DROME (Serine/threonine-protein phosphatase PP2A OS=Drosophila melanogaster GN=mts PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.471e-47
Identity = 89/112 (79.46%), Postives = 100/112 (89.29%), Query Frame = 3
Query:  198 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            DLD+ IE L EC  L E +V+TLCD+A+ IL +E NVQ VKCPVTVCGD+HGQF+DL+ELFRIGG +PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR+RITILRGNHES
Sbjct:    9 DLDQWIEQLNECNQLTETQVRTLCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES 120          
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.227e-47
Identity = 88/113 (77.88%), Postives = 98/113 (86.73%), Query Frame = 3
Query:  195 GDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            G+LD QI  LM+CKPL E +V+ LC++A+ IL EE NVQPVK PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  R+TILRGNHES
Sbjct:   13 GNLDEQISQLMQCKPLSEPDVRALCEKAKEILAEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGNHES 125          
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2AA_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp2ca PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 7.188e-47
Identity = 87/112 (77.68%), Postives = 102/112 (91.07%), Query Frame = 3
Query:  198 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            +LD+ IE L ECK L E++VK+LC++A+ IL +E NVQ V+CPVTVCGD+HGQF+DL+ELFRIGG +PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR+RITILRGNHES
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES 120          
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2AA_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Oryctolagus cuniculus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 7.188e-47
Identity = 87/112 (77.68%), Postives = 102/112 (91.07%), Query Frame = 3
Query:  198 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            +LD+ IE L ECK L E++VK+LC++A+ IL +E NVQ V+CPVTVCGD+HGQF+DL+ELFRIGG +PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR+RITILRGNHES
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES 120          
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2AA_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Sus scrofa GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 7.188e-47
Identity = 87/112 (77.68%), Postives = 102/112 (91.07%), Query Frame = 3
Query:  198 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            +LD+ IE L ECK L E++VK+LC++A+ IL +E NVQ V+CPVTVCGD+HGQF+DL+ELFRIGG +PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR+RITILRGNHES
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES 120          
The following BLAST results are available for this feature:
BLAST of DN617556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
PP2A2_ORYSI6.946e-5081.58Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A4_ORYSI1.185e-4982.30Putative serine/threonine-protein phosphatase PP2A... [more]
PP2A4_ORYSJ1.547e-4982.30Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A_TOBAC5.880e-4980.00Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2AA_DICDI4.978e-4878.57Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A_DROME2.471e-4779.46Serine/threonine-protein phosphatase PP2A OS=Droso... [more]
PP2A5_TOBAC3.227e-4777.88Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2AA_RAT7.188e-4777.68Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RABIT7.188e-4777.68Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_PIG7.188e-4777.68Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617556 ID=DN617556; Name=DN617556; organism=Citrus sinensis; type=EST; length=535bp
AAGAAAAATAATTACCAAGTAATGAGTCAATGATAGAGAGAACAAATTCA
TTCCGATCATCTAAGGGCTTCGTTTTCGTAATCCGCAACCCTATTTCTAA
ACAGTCTATCGATTTTCTAACTATCTAGGATTTCGATCGATCGATCTGTG
GATCTGCTGCGATCTAAACTTAGAGTGAAACGATGCCGTCGCACGGGGAT
CTGGACAGGCAGATCGAGCACTTGATGGAGTGCAAGCCGTTACCGGAGGC
GGAGGTGAAGACACTGTGCGATCAAGCAAGAGCGATTTTGGTGGAGGAGT
GGAACGTGCAGCCGGTCAAGTGTCCGGTCACCGTTTGCGGCGATATTCAC
GGTCAATTTTATGATCTAATCGAGCTCTTTCGCATAGGTGGAAATGCTCC
TGACACTAATTATCTCTTTATGGGTGATTACGTAGATCGGGGTTACTATT
CAGTGGAAACTGTCACACTATTGGTGGCACTGAAAGTTCGATACAGAGAT
AGAATTACAATCCTAAGAGGGAATCATGAGAGTCG
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