DN617551

Overview
NameDN617551
Unique NameDN617551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:122..644. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.652e-40
Identity = 83/163 (50.92%), Postives = 104/163 (63.80%), Query Frame = 1
Query:   31 IMPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYAT 519
            + P R   VG   +ATHPD +RAA++EFI+T IFVFA EGS ++  K+ H+  +T                       NISGGHVNPAVTFGA VGG +SL+R +LYW+AQLLG+  A LLL+  T G     FAL+SGVG W+AV+ E VMTFGL+Y  YAT
Sbjct:    5 VRPGRRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHD-MSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYAT 166          
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.367e-39
Identity = 82/163 (50.31%), Postives = 104/163 (63.80%), Query Frame = 1
Query:   34 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATA 522
            M  R  + G   EATHPD++RA+LAEF ST IFVFAGEGSG+A  K+  + A +                       ++SGGHVNPAV+FGA +GG IS++R + YWIAQLLGS VA L+L+ VTN    S F +S GVG  +  + E+VMTFGL+YTVY TA
Sbjct:    1 MATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTA 163          
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.887e-39
Identity = 80/161 (49.69%), Postives = 102/161 (63.35%), Query Frame = 1
Query:   37 PIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYAT 519
            P R   VG   +ATHPD +RAA++EF++T IFVFA EGS ++  KL +   +TP                      NISGGHVNPA+TFGA +GG +SL+R + YW+AQLLG+ VA LLL+  T G     FAL+SGVG W+AV+ E  MTFGL+Y  YAT
Sbjct:    8 PGRRFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKL-YQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYAT 167          
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.175e-38
Identity = 80/165 (48.48%), Postives = 103/165 (62.42%), Query Frame = 1
Query:   43 RNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKL-----THNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATA 522
            R    G   EATHPD++RA LAEF+ST +FVFAGEGS +A +KL      H G NTP                      N+SGGHVNPAVTF A +GG IS++R I YW+AQL+G+ +ACLLL+  TNG     F ++SGV   + ++ EI++TF LVY VY+TA
Sbjct:    7 RAYGFGRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTA 171          
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.299e-37
Identity = 83/158 (52.53%), Postives = 103/158 (65.19%), Query Frame = 1
Query:   49 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATA 522
            I VG   ++    +L+A L+EFI+TL+FVFAG GS +AF KLT +GA  P+                     NISGGH+NPAVT G  +GGNI+L+ G  YWIAQ LGS VACLLL FVTNG++     +S+G+GA   VV EIV+TF LVYTVYATA
Sbjct:    4 IEVGSVGDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATA 161          
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 2.215e-37
Identity = 81/158 (51.27%), Postives = 103/158 (65.19%), Query Frame = 1
Query:   49 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATA 522
            IA G   ++    +L+A +AEFI+TL+FVFAG GS +A+NKLT + A  P+                     NISGGH+NPAVT G  VGGNI++L G  YWIAQLLGSTVACLLLK+VTNG       +++G+  +  VV EI++TF LVYTVYATA
Sbjct:    4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATA 161          
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.779e-37
Identity = 80/161 (49.69%), Postives = 100/161 (62.11%), Query Frame = 1
Query:   43 RNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGA--NTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYAT 519
            R   VG   +ATHPD +RAA++EFI+T IFVFA EGS ++  K+ H+ +  +T                       N+SGGHVNPAVTFGA VGG +SL+R +LYW AQLLG+  A LLL+  T G     FAL+SGVG  +AV+ E VMTFG VY  YAT
Sbjct:   11 RRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYAT 171          
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 4.935e-37
Identity = 80/158 (50.63%), Postives = 104/158 (65.82%), Query Frame = 1
Query:   49 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATA 522
            IA G   ++    +++A +AEFI+TL+FVFAG GS +A+NKLT + A  P+                     N+SGGH+NPAVT G  VGGNI++L G+ YWIAQ LGSTVACLLLKFVTNG +     +++G+ A   VV EI++TF LVYTVYATA
Sbjct:    4 IAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATA 161          
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 4.935e-37
Identity = 81/158 (51.27%), Postives = 102/158 (64.56%), Query Frame = 1
Query:   49 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATA 522
            IA G   ++    +L+A +AEFI+TL+FVFAG GS +A+NKLT + A  P+                     NISGGH+NPAVT G  VGGNI++L G  YWIAQLLGSTVACLLLK+VTNG       +++G+     VV EI++TF LVYTVYATA
Sbjct:    4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATA 161          
BLAST of DN617551 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 3.199e-36
Identity = 80/158 (50.63%), Postives = 102/158 (64.56%), Query Frame = 1
Query:   49 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATA 522
            I +G   ++    +L+A L+EFI+TL+FVFAG GS +AF KLT + A  P+                     NISGGH+NPAVT G  VGGNI+++ G  YWIAQ LGS VACLLL FVTNG++     +++G+GA   VV EIV+TF LVYTVYATA
Sbjct:    4 IEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATA 161          
The following BLAST results are available for this feature:
BLAST of DN617551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
TIP31_MAIZE3.652e-4050.92Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIPA_PHAVU2.367e-3950.31Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP31_ORYSJ6.887e-3949.69Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP32_ARATH1.175e-3848.48Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP23_ARATH1.299e-3752.53Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP2_TOBAC2.215e-3751.27Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP32_MAIZE3.779e-3749.69Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP_ANTMA4.935e-3750.63Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP1_TOBAC4.935e-3751.27Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP22_ARATH3.199e-3650.63Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617551 ID=DN617551; Name=DN617551; organism=Citrus sinensis; type=EST; length=523bp
CAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACAT
TGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAG
CCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGC
TCGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTC
CGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTG
TCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACC
TTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTA
CTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGT
TCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTT
GGTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGT
GTACACAGTGTATGCCACAGCCC
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