DN617546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617546 vs. ExPASy Swiss-Prot
Match: ARP4_ASHGO (Actin-related protein 4 OS=Ashbya gossypii GN=ARP4 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.548e-12 Identity = 46/165 (27.88%), Postives = 79/165 (47.88%), Query Frame = 3 Query: 126 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFXTFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614 ++I +V D G+ G++G D P+A+ PS G+ G+KD +++ R + +++G V +W+ EK W +ELR P LLTE N + NR+K +++ + + A Y+ A +A GR T +V+D G V+ P+ Sbjct: 12 DEITAVVIDPGSFTTNIGYSGTDCPQAILPSCYGKYTE-------GEKDELFSEQSIGLPRKDYEIHNIVQNGEVVDWEKAEKQWDWAIRSELRFETNSGMPALLTEPIWNSEENRKKSLEVLLESMDFSACYLVPTATAVSFAMGRPTCLVVDIGHDVTSVCPV 169
BLAST of DN617546 vs. ExPASy Swiss-Prot
Match: ARP4_YEAST (Actin-related protein 4 OS=Saccharomyces cerevisiae GN=ARP4 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12 Identity = 45/164 (27.44%), Postives = 74/164 (45.12%), Query Frame = 3 Query: 126 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFXTFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614 +++ +V D G+ G++G D P+++ PS+ G+ G K + R LK IE+G+V +WD ++ W NEL + P LLTE N NR+K +++ A Y+A + +A+GR +V+D G PI Sbjct: 12 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGK-----YTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPI 170
BLAST of DN617546 vs. ExPASy Swiss-Prot
Match: ARP5_DICDI (Actin-related protein 5 OS=Dictyostelium discoideum GN=arpE PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12 Identity = 45/162 (27.78%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 138 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXTFNVPAMYVAIQAVLSLYA------SGRTTGIVLDSGDGVSH 602 P++ DNG+ +AGFA D +P+ +F S+VG+ + T +VG K+ GD ++ LT+K P + ++ + E I+ + F+ E+PVL+TE NP R+ M++++F +N+ ++ I ++ S Y G +++ S +H Sbjct: 32 PIIIDNGSYQCRAGFANDISPKLIFRSLVGKVKSTSSPIVGNSLKE---GDISR-----LTIKSPFDSNLLVHPPSQESIFDYIFHKFGIENEIENPVLITEPTSNPTFCRKYMSELLFECYNIKSVVYGIDSLFSFYGQRDQFKDGGKNSLIIGSSFNTTH 185
BLAST of DN617546 vs. ExPASy Swiss-Prot
Match: ARP5_AEDAE (Actin-related protein 5 OS=Aedes aegypti GN=Arp5 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.503e-12 Identity = 43/166 (25.90%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 141 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQ---KDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFXTFNVPAMYVAIQAVLSLYAS-GRTTGIVLDSGDGVSHTVPI 614 +V DNG+ +AG+AG D P VF +++ +PR + +G++ + + L+ + +V++ E+I+ + F L + + HPVLLTE NP +R M+++MF + +P + A+ +LS + G+ +G+++ G +H +P+ Sbjct: 30 IVIDNGSYHCRAGWAGKDVPSLVFKNVLAKPRKDRSKKDTSEVVVPTVQIGNDITNIEAVRFQLRTQFDRNVVTHLHVQEQIFDYLF-GRLGINADGCVPHPVLLTECVANPNYSRMLMSELMFECYGIPGIVYAVDGLLSYRMNGGQDSGLIVSCGYQATHVIPV 194
BLAST of DN617546 vs. ExPASy Swiss-Prot
Match: ARP5_CHICK (Actin-related protein 5 OS=Gallus gallus GN=ACTR5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11 Identity = 51/172 (29.65%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 138 PLVCDNGTGMVKAGFAGDDA-----PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL-TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFXTFNVPAMYVAIQAVLSLYASGR----TTGIVLDSGDGVSHTVPI 614 PLV DNG+ +AG+A D P F S+ R R G G G + VG++ S + L+ P + + + E ++ H F L VA + +HP++LTEA NP +R+ M++++F + VP + + ++ S Y + R +G+V+ SG +H +P+ Sbjct: 33 PLVIDNGSFQTRAGWAAADPSVPAEPLLRFRSLAARSR--GARGGAGA-ETQVGNDLGSPEPLRWLLRSPFDRNVPVQLELQELLFDHVF-QRLGVASQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYQVPKVSYGVDSLYSFYHNRRQNWPCSGLVISSGYQCTHILPV 200
BLAST of DN617546 vs. ExPASy Swiss-Prot
Match: ARP6_CRYNE (Actin-like protein ARP6 OS=Cryptococcus neoformans GN=ARP6 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.919e-11 Identity = 53/169 (31.36%), Postives = 76/169 (44.97%), Query Frame = 3 Query: 141 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKY--PIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFXTFNVPAMYVAIQAVL----SLYASGR----TTGIVLDSGDGVSHTVPI 614 L+ DNG +KAG +G D V P+ + R R +K YVGDE + + + + Y P E G++ NWD IW F + L + P E +L+TE N E Q++F F + + A L LY S + IV+D G +H VPI Sbjct: 7 LIIDNGAYEIKAGISGVDWEPRVLPNSIARSR--------TEKRVYVGDEIDNCKDLSGIVYRRPFEKGMLVNWDAERIIWDRLFSPSVLNINPTETSLLVTEPYFNLPNIAETYDQMIFEEFEFQSYFRCAPAALIPYGGLYESDQGIPPQCTIVIDMGYSYTHVVPI 167 The following BLAST results are available for this feature:
BLAST of DN617546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 456
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617546 ID=DN617546; Name=DN617546; organism=Citrus sinensis; type=EST; length=615bpback to top |