DN617542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.621e-29 Identity = 86/210 (40.95%), Postives = 113/210 (53.81%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHISCVSGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQLNESYCNKIVSSFKCLRTLNLSNSEIETVPSLIGKLKHLRYFNLSHNADIKSLPDSVSRLLNL 631 LP L+QCFAYCA+FPKD ++KE L+ LWMA GFL LS N EDVG+E + L RSFFQ+ E GN KIHDL+HDLA S+ + + NV + H +S GF + + SY ++ F LR LNLS S++E +PS IG L HLRY +LS N + +SLP+ + +L NL Sbjct: 400 LPLDLRQCFAYCAVFPKDTKMIKENLITLWMAHGFL-LSKGNLELEDVGNEVWNELYLRSFFQEIEAKS-GNTY-FKIHDLIHDLATSLFSASASCGNIREINVKDYKHTVSI--GFAAVV----------------------------SSYSPSLLKKFVSLRVLNLSYSKLEQLPSSIGDLLHLRYLDLSCN-NFRSLPERLCKLQNL 575
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.143e-28 Identity = 86/210 (40.95%), Postives = 110/210 (52.38%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHISCVSGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQLNESYCNKIVSSFKCLRTLNLSNSEIETVPSLIGKLKHLRYFNLSHNADIKSLPDSVSRLLNL 631 LP L+QCFAYCA+FPKD I KE L+ LWMA FL LS N EDVG+E + L RSFFQ+ E K+HDL+HDLA S+ + + NV + D + F N + +S +S ++ SY + F LR LNLSNSE E +PS +G L HLRY +LS N I SLP + +L NL Sbjct: 398 LPLDLRQCFAYCAVFPKDTKIEKEYLIALWMAHSFL-LSKGNMELEDVGNEVWNELYLRSFFQEIEVKSGKTYF--KMHDLIHDLATSMFSASASSRSIRQINVKD-----------DEDMMFIVT-----NYKDMMSIGFS----EVVSSYSPSLFKRFVSLRVLNLSNSEFEQLPSSVGDLVHLRYLDLSGN-KICSLPKRLCKLQNL 583
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.370e-27 Identity = 79/210 (37.62%), Postives = 104/210 (49.52%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHISCVSGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQLNESYCNKIVSSFKCLRTLNLSNSEIETVPSLIGKLKHLRYFNLSHNADIKSLPDSVSRLLNL 631 LP L+QCF YCA+FPKD + KE L+ WMA GFL LS N EDVG+E + L RSFFQ+ E + K+HDL+HDLA S+ + + N N G+ S+ F + SY ++ F LR LNL NS + +PS IG L HLRY +LS N I++LP + +L NL Sbjct: 398 LPLDLRQCFVYCAVFPKDTKMAKENLIAFWMAHGFL-LSKGNLELEDVGNEVWNELYLRSFFQEIEVESGKTYF--KMHDLIHDLATSLFSANTSSSNIREINAN--------YDGYMMSIGFAEVV----------------------SSYSPSLLQKFVSLRVLNLRNSNLNQLPSSIGDLVHLRYLDLSGNFRIRNLPKRLCKLQNL 574
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.623e-26 Identity = 81/210 (38.57%), Postives = 105/210 (50.00%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHISCVSGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQLNESYCNKIVSSFKCLRTLNLSNSEIETVPSLIGKLKHLRYFNLSHNADIKSLPDSVSRLLNL 631 LP LKQCFAYCA+FPKD + KE+L+ LWMA GFL LS N EDVG E + L RSFFQ+ E + K+HDL+HDLA S+ + + N + TH +S GF + F Y + F LR LNL +S +PS IG L HLRY NL + + ++SLP + +L NL Sbjct: 399 LPLDLKQCFAYCAVFPKDAKMEKEKLISLWMAHGFL-LSKGNMELEDVGDEVWKELYLRSFFQEIEVKDGKTYF--KMHDLIHDLATSLFSANTSSSNIREINKHSYTHMMSI--GFAEVVFF----------------------------YTLPPLEKFISLRVLNLGDSTFNKLPSSIGDLVHLRYLNL-YGSGMRSLPKQLCKLQNL 574
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.698e-25 Identity = 79/214 (36.92%), Postives = 124/214 (57.94%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLD-ARNVNERTHHIS-CVSGFDSSLEFPTALLRAKNLRTFL--STVYSSSDRQLNESYCNKIVSSFKCLRTLNLSNSEIETVPSLIGKLKHLRYFNLSHNADIKSLPDSVSRLLNL 631 LP LK+CFA C++FPK ++ +E+LVLLWMA L ++ ED+G++Y L+++SFFQ + + +HDLM+DLA++V+G C +++ D + T H S S D+S+ F ++ A+ LRT L ++ S QL E N ++++ LR L+LS+ +I +P + LK LRY +LS + IK LP+ V L NL Sbjct: 414 LPPQLKRCFALCSIFPKGHVFDREELVLLWMAIDLLYQPRSSRRLEDIGNDYLGDLVAQSFFQRLDI----TMTSFVMHDLMNDLAKAVSGDFCFRLEDDNIPEIPSTTRHFSFSRSQCDASVAF-RSICGAEFLRTILPFNSPTSLESLQLTEKVLNPLLNALSGLRILSLSHYQITNLPKSLKGLKLLRYLDLS-STKIKELPEFVCTLCNL 621
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.428e-25 Identity = 74/215 (34.42%), Postives = 124/215 (57.67%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDAR-NVNERTHHISCV-SGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQ--LNESYCNKIVSSFKCLRTLNLSNSEIETV-PSLIGKLKHLRYFNLSHNADIKSLPDSVSRLLNL 631 LP+ LK+CFAYC++FPK + K+++VLLWMA+GFL + ++ E++G+EYF L SRS Q + R +HD +++LA+ +G +K + + V+ERT ++S + + +EF AL K LRTFL ++S R L++ K++ + LR L+LS+ +I + P + H R+ +LS +++ LP S+ + NL Sbjct: 422 LPAHLKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTK-------TRYIMHDFINELAQFASGEFSSKFEDGCKLQVSERTRYLSYLRDNYAEPMEF-EALREVKFLRTFLPLSLTNSSRSCCLDQMVSEKLLPTLTRLRVLSLSHYKIARLPPDFFKNISHARFLDLS-RTELEKLPKSLCYMYNL 627
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: RPM1_ARATH (Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.792e-17 Identity = 67/219 (30.59%), Postives = 112/219 (51.14%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTE--CAKVKLDARN-------VNERTHHISCVSGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQLNESYCNKIVSSFKCLRTLNLSNSEIETVPSLIGKLKHLRYFNLSHNADIKSLPDSVSRLLNL 631 LP PLK+CF YC+LFP +Y + +++L+ +WMAQ F+ I E+V Y L+ R+ Q ++ +G K+HD++ ++A SV+ E C D+ N + H+ C+ E +RA NL + L V SS+ ++ +++ S LR L+L +S I +P + + +L+Y NLS +K LP + +L+NL Sbjct: 427 LPYPLKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVE-PIRGVKAEEVADSYLNELVYRNMLQVILWNPFGRPKAFKMHDVIWEIALSVSKLERFCDVYNDDSDGDDAAETMENYGSRHL-CI-----QKEMTPDSIRATNLHSLL--VCSSAKHKM------ELLPSLNLLRALDLEDSSISKLPDCLVTMFNLKYLNLS-KTQVKELPKNFHKLVNL 629
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: R13L3_ARATH (Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14 Identity = 68/223 (30.49%), Postives = 101/223 (45.29%), Query Frame = 2 Query: 14 LKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHISCVSGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQLNE--------------SYCNKIVSSFKCLRTLNL------SNSEIETVPSLIGKLKHLRYFNLSHNADIKSLPDSVSRL 622 LK CF Y ++FP+DY I E+L+ L +A+GF+ + EDV Y L+ RS + AE E G ++ C+IHDL+ DLA A +L+ NV H S + + + L Y DR++N+ Y N K LR LN+ S + T+P +IG+L HLRY ++ + + LP S+S L Sbjct: 417 LKLCFLYFSVFPEDYEIKVEKLIHLLVAEGFI-QEDEEMMMEDVARCYIDELVDRSLVK-AERIERGKVMSCRIHDLLRDLAIKKA------KELNFVNVYNEKQHSSDIC--------------RREVVHHLMNDYYLCDRRVNKRMRSFLFIGERRGFGYVNTTNLKLKLLRVLNMEGLLFVSKNISNTLPDVIGELIHLRYLGIA-DTYVSILPASISNL 616
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: DRL3_ARATH (Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.142e-13 Identity = 62/233 (26.61%), Postives = 105/233 (45.06%), Query Frame = 2 Query: 14 LKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAG-------TECAK--VKL----------DARNVNERTHHISCVSGFDSSLEFPTALLRAKNL--------RTFLSTVYSSSDRQLNESYCNKIVSSFKCLRTLNLSNSEIETVPSLIGKLKHLRYFNLSHNADIKSLPDSVSRLLNL 631 +K CF YC+LFP+DY + KE+L+ WM +GF+ + D + GH+ SL+ D E + K+HD++ ++A +A T C K V+L R ++ + I+ +S +S T LL+ L R + V R + S + +S L+ +NLS + I+ +P +LK L + NL +++S+ + L NL Sbjct: 475 VKLCFLYCSLFPEDYEVRKEELIEYWMCEGFIDGNEDEDGANNKGHDIIGSLVRAHLLMDGEL-----TTKVKMHDVIREMALWIASNFGKQKETLCVKPGVQLCHIPKDINWESLRRMSLMCNQIANISSSSNSPNLSTLLLQNNKLVHISCDFFRFMPALVVLDLSRNSSLSSLPEAISKLGSLQYINLSTTGIKWLPVSFKELKKLIHLNLEFTDELESIVGIATSLPNL 702
BLAST of DN617542 vs. ExPASy Swiss-Prot
Match: R13L4_ARATH (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13 Identity = 61/214 (28.50%), Postives = 98/214 (45.79%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHISCVSGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQLNESYCNKIVSSFKCLRTLNLSNS----EIETVPSLIGKLKHLRYFNLSHNADIKSLPDSVSRLLNL 631 LPS LK C +L+P+D +I K+QLV W+ +GF+ + + + + G + F L +R + + G II CKIHD++ DL +A + + +N R H+ FD + LR +ST + +LN K + K LR L++S S + + I L+HL +LS+ + P S+ L NL Sbjct: 411 LPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFV-MWRNGRSATESGEDCFSGLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSFS---NPEGLNCR--HLGISGNFDEK-----QIKVNHKLRGVVSTTKTGEVNKLNSDLAKKF-TDCKYLRVLDISKSIFDAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNL 612 The following BLAST results are available for this feature:
BLAST of DN617542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617542 ID=DN617542; Name=DN617542; organism=Citrus sinensis; type=EST; length=632bpback to top |