DN617538

Overview
NameDN617538
Unique NameDN617538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_HALVO (V-type ATP synthase beta chain OS=Halobacterium volcanii GN=atpB PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.954e-43
Identity = 86/158 (54.43%), Postives = 113/158 (71.52%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EY+T+T ++GPLV  +  +   Y EIV I    G  +RGQVLE       +QVFEGTSGID    +V+F GE LK PV+ D+LGR+ +GSG+PID GP I+P+   DI G++INP  R YPEE IQTG+S ID MN++ RGQK+P+FSA+GLPHN++A
Sbjct:    3 EYQTITEISGPLVFAEVDEPIGYDEIVEIETPQGETKRGQVLESSEGLVAIQVFEGTSGIDRN-ASVRFLGETLKMPVTEDLLGRVLDGSGQPIDGGPEIVPDERRDIVGAAINPYSREYPEEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLA 159          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLOB6 (V-type ATP synthase beta chain OS=Clostridium botulinum (strain 657 / Type Ba4) GN=atpB PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.954e-43
Identity = 84/158 (53.16%), Postives = 117/158 (74.05%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EYRTV  V GPL+++D+V+   + E+V I L +G  RRG+VLE++ +KA+VQ+FEG++GI+ K   V+F G+ L+  VS DMLGR+F+G G P D GP I+P+   DISG  INP  R YP+E IQTG+S ID +N++ RGQK+P+FS +GLPH E+A
Sbjct:    4 EYRTVKEVVGPLMLVDQVESVSFDELVEIELHNGEKRRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFDGLGNPKDGGPKIIPDEKRDISGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPHAELA 161          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_AERPE (V-type ATP synthase beta chain OS=Aeropyrum pernix GN=atpB PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.882e-42
Identity = 84/158 (53.16%), Postives = 111/158 (70.25%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EYR ++ + GPL++++ V    Y EIV +    G  RRG+VLEV    AVVQVFEGT+GI    T V+F G  L+ PV+ DMLGRI NG G+PID GP I  +   D++G+ +NP+ER YPE+ IQTG+S ID MN++ RGQK+P+FS AGLPHN +A
Sbjct:    7 EYRNISEIKGPLLVVEGVSRVAYDEIVEVETAAGEKRRGRVLEVGMGYAVVQVFEGTTGISPTGTVVRFMGRPLEIPVTEDMLGRIMNGLGEPIDGGPKIDADERRDVNGAPLNPAERAYPEDFIQTGVSAIDGMNTLVRGQKLPIFSGAGLPHNRLA 164          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB3_METHJ (V-type ATP synthase beta chain 3 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpB3 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.882e-42
Identity = 88/162 (54.32%), Postives = 114/162 (70.37%), Query Frame = 1
Query:  133 MEYRTVTGVA---GPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            + +RT TGV+   GPL++LD V+G  Y EI  I L  G +R GQVLE    +A+VQVF GT  +D + T V+F GE +K  +S DMLGR F+GS +PID G P++PE   DI GS INPS R +P + IQTGIS+ID MN++ RGQK+P+FS AGLPHN +A
Sbjct:    4 LRFRTYTGVSKVVGPLMVLDGVEGIGYGEIAEITLPGGEVRIGQVLETTTTRAMVQVFRGTRDLDTEKTQVRFRGEPMKISLSSDMLGRTFDGSARPIDGGGPVIPECIRDIYGSPINPSAREHPRDSIQTGISSIDGMNTLVRGQKLPIFSGAGLPHNLLA 165          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_HYPBU (V-type ATP synthase beta chain OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=atpB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.458e-42
Identity = 87/165 (52.73%), Postives = 110/165 (66.67%), Query Frame = 1
Query:  115 GTLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            G   V  EY T+  V GPL+I++ +    Y EIV + L  G  RRG+VLE     AVVQVFEGT+GI    T V+F G  L+  VS +MLGR+FNG G PID GPPI      DI+G  +NP+ R YPE+ IQTGIS ID MN++ RGQK+P+FS +GLPHN++A
Sbjct:    6 GPSPVIREYETIREVRGPLLIVEGISDAAYDEIVEVELPSGERRRGRVLETARGYAVVQVFEGTTGISVTGTKVRFLGRTLEIKVSDEMLGRVFNGLGDPIDGGPPITSGVRRDINGEPLNPAARAYPEDFIQTGISAIDGMNTMVRGQKLPIFSGSGLPHNKLA 170          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_PICTO (V-type ATP synthase beta chain OS=Picrophilus torridus GN=atpB PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.193e-42
Identity = 84/157 (53.50%), Postives = 111/157 (70.70%), Query Frame = 1
Query:  139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            YR+V+ ++GPL+ ++ VK   Y EIV+I L +G  RRGQVLE     ++VQ++  T+GI     +V+FTG   + PVS DMLGRIFNG G+PIDNGP I  +  LDI+GS+INP  R  P E +QTGISTID MN++  GQK+P+FS AGL HN +A
Sbjct:    6 YRSVSQISGPLLFVEDVKDTSYNEIVDIILDNGEKRRGQVLETRNGLSIVQIYGSTTGISTSNASVKFTGSTFRLPVSDDMLGRIFNGFGEPIDNGPKIYSKDKLDINGSAINPYSREEPSEFVQTGISTIDGMNTLVMGQKLPIFSGAGLSHNRLA 162          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLOBJ (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Kyoto / Type A2) GN=atpB PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.193e-42
Identity = 83/158 (52.53%), Postives = 116/158 (73.42%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EYRTV  V GPL+++D+V+   + E+V I L +G  RRG+VLE++ +KA+VQ+FEG++GI+ K   V+F G+ L+  VS DMLGR+F+G G P D GP I+ +   DISG  INP  R YP+E IQTG+S ID +N++ RGQK+P+FS +GLPH E+A
Sbjct:    4 EYRTVKEVVGPLMLVDQVESVSFDELVEIELHNGEKRRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFDGLGNPKDGGPKIIADEKRDISGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPHAELA 161          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_NATPD (V-type ATP synthase beta chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=atpB PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.477e-42
Identity = 83/158 (52.53%), Postives = 114/158 (72.15%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EY+T+T ++GPLV  +  +   Y E+V I    G  RRGQVLE   E   +QVFEGTSGID   ++V+F GE L+ P++ ++LGR+ +GSG+PID GP I P+   +I G++INP+ R YPEE IQTG+S ID MN++ RGQK+P+FS +GLPHNE+A
Sbjct:    4 EYKTITEISGPLVFAEVDEPVGYDEMVEIETPSGETRRGQVLESTSEFVAIQVFEGTSGIDRN-SSVRFLGETLQMPLTEELLGRVLSGSGEPIDGGPEIEPDEEREIVGAAINPTAREYPEEFIQTGVSAIDGMNTLIRGQKLPIFSGSGLPHNELA 160          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLONN (V-type ATP synthase beta chain OS=Clostridium novyi (strain NT) GN=atpB PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.477e-42
Identity = 80/158 (50.63%), Postives = 114/158 (72.15%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EY+TV  V GPL++++  KG  Y E+V I L  G +R G+VLE+  +KA++Q+FEG++GI+ K T  +F G+ L+  +S DMLGR+F+G G+P D GP I+PE   DI+G  +NP  R YP E IQTG+S ID +N++ RGQK+P+FS +GLPH E+A
Sbjct:    4 EYKTVQEVVGPLMLVEGTKGVTYDELVEIELQTGEIRHGRVLEISEDKALIQLFEGSTGINLKETKTRFLGKPLEVGLSEDMLGRVFDGMGRPKDGGPKIIPEERRDINGEPLNPFARDYPSEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPHAELA 161          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_HALSA (V-type ATP synthase beta chain OS=Halobacterium salinarium GN=atpB PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.081e-41
Identity = 83/158 (52.53%), Postives = 113/158 (71.52%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EY+T+T V+GPLV ++  +   Y EIV I   +G ++RGQVLE       +QVFEGT G+  K  +V+F GE LK PV+ D+LGR+ +GSG PID GP I+P+  +DI G +INP  R YPEE IQTG+S ID MN++ RGQK+P+FS +GLPH+++A
Sbjct:    3 EYQTITEVSGPLVYVETDEPIGYDEIVEIETPNGDVKRGQVLESSDGFVAIQVFEGTEGV-GKDASVRFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDDRVDIVGEAINPHAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLA 159          
The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
VATB_HALVO4.954e-4354.43V-type ATP synthase beta chain OS=Halobacterium vo... [more]
VATB_CLOB64.954e-4353.16V-type ATP synthase beta chain OS=Clostridium botu... [more]
VATB_AERPE1.882e-4253.16V-type ATP synthase beta chain OS=Aeropyrum pernix... [more]
VATB3_METHJ1.882e-4254.32V-type ATP synthase beta chain 3 OS=Methanospirill... [more]
VATB_HYPBU2.458e-4252.73V-type ATP synthase beta chain OS=Hyperthermus but... [more]
VATB_PICTO4.193e-4253.50V-type ATP synthase beta chain OS=Picrophilus torr... [more]
VATB_CLOBJ4.193e-4252.53V-type ATP synthase beta chain OS=Clostridium botu... [more]
VATB_NATPD5.477e-4252.53V-type ATP synthase beta chain OS=Natronomonas pha... [more]
VATB_CLONN5.477e-4250.63V-type ATP synthase beta chain OS=Clostridium novy... [more]
VATB_HALSA2.081e-4152.53V-type ATP synthase beta chain OS=Halobacterium sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F14_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bp
CTCTCTCTTTCTCTCTCTCTCTCACACACACTCACAGAGATCACAAGAAA
GACCAAAAAAAAAGAAAAAAAATTGAAAATGGGTGTGGCACAAAACAATG
TTGACATGGAGGAGGGTACGCTGGAAGTCGCCATGGAGTACAGAACGGTC
ACCGGAGTTGCTGGGCCTCTAGTTATCCTTGATAAAGTCAAGGGACCCAA
ATATTATGAGATTGTCAATATTCGGTTGGGAGATGGAACAATGCGACGTG
GTCAGGTCCTAGAAGTTGATGGAGAGAAAGCTGTTGTTCAGGTCTTTGAA
GGGACATCCGGAATTGACAATAAATTTACAACTGTGCAGTTTACAGGGGA
GGTTCTGAAGACTCCTGTCTCATTGGATATGCTTGGGCGCATTTTTAATG
GTTCTGGGAAACCCATTGATAATGGTCCCCCAATTTTGCCGGAGGCTTAC
TTGGATATATCCGGAAGTTCTATCAACCCTAGTGAGAGAACCTATCCTGA
AGAGATGATACAGACAGGGATTTCTACCATTGATGTGATGAACTCCATTG
CTAGAGGACAAAAGATCCCTCTTTTTTCTGCTGCCGGTCTTCCCCATAAT
GAAATTGCTGC
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