DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_HALS3 (V-type ATP synthase beta chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=atpB PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.081e-41 Identity = 83/158 (52.53%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+T+T V+GPLV ++ + Y EIV I +G ++RGQVLE +QVFEGT G+ K +V+F GE LK PV+ D+LGR+ +GSG PID GP I+P+ +DI G +INP R YPEE IQTG+S ID MN++ RGQK+P+FS +GLPH+++A Sbjct: 3 EYQTITEVSGPLVYVETDEPIGYDEIVEIETPNGDVKRGQVLESSDGFVAIQVFEGTEGV-GKDASVRFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDDRVDIVGEAINPHAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLA 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_HALLT (V-type ATP synthase beta chain OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=atpB PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.718e-41 Identity = 82/158 (51.90%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+T+T ++GPLV + + Y EIV I G RGQVLE +QVFEGTSGID +V+F GE +K PV+ D+LGR+ +GSG+PID+GP I+PE DI G++INP R YPEE I+TG+S ID MN++ RGQK+P+FS++G PH+++A Sbjct: 3 EYQTITEISGPLVYAEVDEAIGYDEIVEIETAQGETLRGQVLESSEGVVAIQVFEGTSGIDQN-ASVRFLGETMKMPVTEDLLGRVLDGSGRPIDDGPEIVPEERQDIVGAAINPYSREYPEEFIETGVSAIDGMNTLVRGQKLPIFSSSGQPHSQLA 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_HALWD (V-type ATP synthase beta chain OS=Haloquadratum walsbyi (strain DSM 16790) GN=atpB PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.550e-41 Identity = 82/158 (51.90%), Postives = 114/158 (72.15%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+TVT ++GPL+ + + Y EIV I +G ++RGQVLE + +QVFEGTSGID +V+F+GE LK V+ D+LGR+ +GSG+PID GP IL + +I G++INP R YPEE IQTG++ +D MN++ RGQK+P+FS +GLPHNE+A Sbjct: 3 EYQTVTEISGPLIYAEVDEPIGYDEIVEIETPNGDIKRGQVLESEDGLVAIQVFEGTSGIDTN-ASVRFSGETLKMKVTEDLLGRVLDGSGQPIDGGPEILADERREIVGAAINPYAREYPEEFIQTGVAAVDGMNTLVRGQKLPIFSGSGLPHNELA 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLOD6 (V-type ATP synthase beta chain OS=Clostridium difficile (strain 630) GN=atpB PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.550e-41 Identity = 79/158 (50.00%), Postives = 119/158 (75.32%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+++ VAGPL++++ V+G K+ E+ I L +G +RR +VLEV+G+ A+VQ+FE ++GI+ + V+F G+ L VS D+LGR+F+G G+PID GP I+P+ LDI+G+ INP+ R YP E IQTG+S ID +N++ RGQK+P+FS +GLPH +A Sbjct: 4 EYKSIQEVAGPLMLINGVEGVKFDELGEIELSNGEIRRCKVLEVNGDTALVQLFESSTGINLAESKVRFLGKSLDFGVSPDILGRVFSGMGRPIDGGPEIIPDKRLDINGAPINPAARDYPAEFIQTGVSAIDGLNTLVRGQKLPIFSGSGLPHANLA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THET8 (V-type ATP synthase beta chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=atpB PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 2.301e-40 Identity = 85/158 (53.80%), Postives = 110/158 (69.62%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY +T ++GPL+ ++ K Y IV+I+ G G +R GQV+EV E AV+QVFE T+G+D T+V +V + VS +MLGR FNG GKPID PPI PE L I+G +NP R PE+ IQTGISTIDVMN++ RGQK+P+FS +GLP NEIA Sbjct: 7 EYTGITYISGPLLFVENAKDLAYGAIVDIKDGTGRVRGGQVIEVSEEYAVIQVFEETTGLDLATTSVSLVEDVARLGVSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIA 164
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THET2 (V-type ATP synthase beta chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=atpB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.301e-40 Identity = 85/158 (53.80%), Postives = 110/158 (69.62%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY +T ++GPL+ ++ K Y IV+I+ G G +R GQV+EV E AV+QVFE T+G+D T+V +V + VS +MLGR FNG GKPID PPI PE L I+G +NP R PE+ IQTGISTIDVMN++ RGQK+P+FS +GLP NEIA Sbjct: 7 EYTGITYISGPLLFVENAKDLAYGAIVDIKDGTGRVRGGQVIEVSEEYAVIQVFEETTGLDLATTSVSLVEDVARLGVSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIA 164
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THEAC (V-type ATP synthase beta chain OS=Thermoplasma acidophilum GN=atpB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.005e-40 Identity = 76/159 (47.80%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 + Y++V+ ++GPL+ ++ V Y E+V+I L +G R+GQVL+ A+VQ+F T+GI + TTV+F GE + P+S DMLGR+FNG G+PID GP I+ + ++I+ ++INP R P E I+TGIS ID MN++ RGQK+P+FS +GLPHN++A Sbjct: 4 LAYKSVSQISGPLLFVENVPNAAYNEMVDIELENGETRQGQVLDTRKGLAIVQIFGATTGIGTQGTTVKFRGETARLPISEDMLGRVFNGIGEPIDGGPEIIAKERMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHNQLA 162
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_DICT6 (V-type ATP synthase beta chain OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=atpB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.005e-40 Identity = 79/158 (50.00%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY +V+ ++GPLV+++ ++ KY E+V ++L +G +R+GQVLE A+VQ+F T + K V+F G VL+ +S ++LGR F+G G+P D GP I+P+ +DI+GS INP R YP+E IQTGIS ID MN+I RGQKIP+FS AGLPH +A Sbjct: 4 EYTSVSKISGPLVLVENIENVKYGEVVEVKLANGEIRQGQVLEAQEGAALVQMFASTQDLSLKGMRVKFLGHVLEINLSPEILGRTFDGLGRPRDGGPEIIPQKRMDINGSPINPYSRAYPQEFIQTGISAIDGMNTIVRGQKIPIFSGAGLPHATLA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_DICTD (V-type ATP synthase beta chain OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=atpB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.925e-40 Identity = 78/158 (49.37%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY +V+ ++GPLV+++ ++ KY E+V ++L +G +R+GQVLE A+VQ+F T + K ++F G VL+ +S ++LGR F+G G+P D GP I+P+ +DI+GS INP R YP+E IQTGIS ID MN+I RGQKIP+FS AGLPH +A Sbjct: 4 EYTSVSKISGPLVLVENIENVKYGEVVEVKLANGEIRQGQVLEAQEGAALVQMFASTQDLSLKGMRIKFLGHVLEINLSPEILGRTFDGLGRPRDGGPEIIPQKRMDINGSPINPYSRAYPQEFIQTGISAIDGMNTIVRGQKIPIFSGAGLPHATLA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THEVO (V-type ATP synthase beta chain OS=Thermoplasma volcanium GN=atpB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.695e-40 Identity = 76/159 (47.80%), Postives = 113/159 (71.07%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 + Y++V+ ++GPL+ ++ V Y E+V+I L +G R+GQVL+ A+VQ+F T+GI + T V+F GE + P+S DMLGR+FNG G+PID GP IL + ++I+ ++INP R P E I+TGIS ID MN++ RGQK+P+FS +GLPHN++A Sbjct: 4 LTYKSVSEISGPLLFVENVPNAAYNEMVDIELDNGETRQGQVLDTRKGLAIVQIFGATTGIGTEGTRVKFRGETARLPISEDMLGRVFNGIGEPIDGGPEILAKERMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHNQLA 162 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |