DN617538

Overview
NameDN617538
Unique NameDN617538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_PYRIL (V-type ATP synthase beta chain OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=atpB PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.660e-36
Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = 1
Query:  121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            L   + Y TV  V GPL++++K +G  Y EI  +   DG  R+ QV+EV  + A+ QV  GT G+  K +TV+F G+ LK PVS +++GRI +G G+P D+ P   PE + D++G  +NP  R YPEE I+TGIS ID + ++ RGQK+P+FS  GLPHN +A
Sbjct:    2 LTPVVSYSTVREVKGPLIVIEKTRGVSYGEIGEVIGPDGEPRKVQVIEVGTDYAIAQVLGGTLGLPAKGSTVRFYGKTLKMPVSEELIGRILDGKGQPRDHMPLPPPEDFRDVNGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNMMA 164          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_PYRAE (V-type ATP synthase beta chain OS=Pyrobaculum aerophilum GN=atpB PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.660e-36
Identity = 76/163 (46.63%), Postives = 106/163 (65.03%), Query Frame = 1
Query:  121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            L   + Y TV  V GPL++++K +G  Y E+  +   DG  RR QV+EV  + AV QV  GT G+  K +TV+F G+ LK PVS  ++GRI +G G+P D+ P   PE + D++G  +NP  R YPEE I+TGIS ID + ++ RGQK+P+FS  GLPHN +A
Sbjct:    2 LTPVVSYTTVREVKGPLIVIEKTRGVSYGEVGEVIGPDGEPRRVQVIEVGTDYAVAQVLGGTLGLPAKGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRDHMPLPPPEDFRDVNGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNLMA 164          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_DEIDV (V-type ATP synthase beta chain OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=atpB PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.660e-36
Identity = 75/158 (47.47%), Postives = 103/158 (65.19%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EY  V  ++GPL+ ++      Y  IVNI+   G  R GQV+ V  + AV+QVFE T G+D    +V    +V +  VS +M+GR F+G G+PID  P ++ E  L I+G ++NP+ R  PEE IQTGISTIDV  S+ RGQK+P+FS +GLPHNE+A
Sbjct:    7 EYNDVAYISGPLLFVNAASDLAYGAIVNIKDASGRSRGGQVISVTDQNAVIQVFEETRGLDLATASVSLVEDVARLGVSKEMIGRRFDGLGRPIDGLPQVVAEQRLSINGQAMNPAARAKPEEFIQTGISTIDVQTSLIRGQKLPIFSGSGLPHNELA 164          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THENN (V-type ATP synthase beta chain OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=atpB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.307e-35
Identity = 73/158 (46.20%), Postives = 108/158 (68.35%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EY  ++ + GP+V+++ V G +Y E+V + L +G  R G+V+      A++QVFEGT  +D + T V+F G+ L+  +S D+LGR  +G GKP DN   I+PE  +DI+GS INPS R YP   IQTGIS+IDV+ ++ RGQK+P+F+  GLP+N +A
Sbjct:    5 EYTGLSEIRGPIVVVENVSGVRYDEVVELILENGEKRTGRVIIAGENVAIIQVFEGTEEMDIEGTRVRFLGKPLEVSLSPDLLGRTLDGLGKPRDNLGEIVPEKTVDINGSPINPSAREYPRNFIQTGISSIDVLMTLIRGQKLPIFAGNGLPYNRLA 162          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_SULSO (V-type ATP synthase beta chain OS=Sulfolobus solfataricus GN=atpB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.307e-35
Identity = 73/158 (46.20%), Postives = 104/158 (65.82%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            E+  ++ + GPLV +  V    Y E+V I + +G  RRG V++     A+VQVFEGT+G+    T ++  G  L+  +S +MLGRIFN  G  +DNGPP++     DI+GS +NP+ R YPEE IQTGIS ID +N++ RGQK+P+FS +GLP N +A
Sbjct:    6 EFSNISMIKGPLVYVQGVTDASYNELVEIEMPNGERRRGLVIDSQMGIAIVQVFEGTTGVSPTGTKIRMLGRGLEVKISEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAAREYPEEFIQTGISAIDGLNALLRGQKLPIFSGSGLPANMLA 163          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_PYRAR (V-type ATP synthase beta chain OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=atpB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.307e-35
Identity = 76/163 (46.63%), Postives = 106/163 (65.03%), Query Frame = 1
Query:  121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            L   + Y TV  V GPL++++K +G  Y EI  +   DG  RR QV+EV  + AV QV  GT G+  + +TV+F G+ LK PVS  ++GRI +G G+P D+ P   PE + D++G  +NP  R YPEE I+TGIS ID + ++ RGQK+P+FS  GLPHN +A
Sbjct:    2 LTPVVSYSTVREVKGPLIVIEKTRGVSYGEIGEVVGPDGEPRRVQVIEVGTDYAVAQVLGGTLGLPARGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRDHMPLPPPEDFRDVNGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNLMA 164          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_HALOH (V-type ATP synthase beta chain OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=atpB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.307e-35
Identity = 73/158 (46.20%), Postives = 105/158 (66.46%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            EYR V  + GPLV++D V    + E+V +   D   RRG+VL+V   +AV+QVFEGTSG+  + T V+F    ++  +S D+LGR+FNG G+PID G  +      +I+G++INP  R YP   IQTG+S ID + ++ RGQK+P+FS  GLPHN++A
Sbjct:    5 EYRGVASINGPLVVVDGVTDVGFDEMVEVITPDKHKRRGRVLQVSKNRAVIQVFEGTSGLATETTRVKFLRHPMEIALSRDILGRVFNGVGEPIDGGGEVYSNKKYNINGNAINPYSRQYPRNYIQTGVSAIDGLITLIRGQKLPIFSGNGLPHNQLA 162          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THENV (V-type ATP synthase beta chain OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=atpB PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.706e-35
Identity = 76/163 (46.63%), Postives = 107/163 (65.64%), Query Frame = 1
Query:  121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            L   + Y TV  V GPL+++++ +G  Y EI  +   DG  RR QV+EV  + AV QV  GT G+  K +TV+F G+ LK PVS +++GRI +G G+P D+ P   PE + D++G  +NP  R YPEE I+TGIS ID + ++ RGQK+P+FS  GLPHN +A
Sbjct:    2 LTPVVSYSTVKEVKGPLLVIERTRGVAYGEIGEVVGPDGEPRRVQVIEVGTDYAVAQVLGGTLGLPAKGSTVRFYGKTLKLPVSEELIGRILDGKGQPRDHMPLPPPEDFRDVNGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNLMA 164          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_SULIY (V-type ATP synthase beta chain OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=atpB PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.706e-35
Identity = 72/158 (45.57%), Postives = 104/158 (65.82%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            E+  ++ + GPL+ +  V    Y E+V I + +G  RRG V++     A+VQVFEGT+G+    T ++  G  L+  +S +MLGRIFN  G  +DNGPP++     DI+GS +NP+ R YPEE IQTGIS ID +N++ RGQK+P+FS +GLP N +A
Sbjct:    6 EFSNISMIKGPLIYVQGVTDASYNELVEIEMPNGEKRRGLVIDSQMGIAIVQVFEGTTGVSPTGTKIRMLGRGLEVKISEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAAREYPEEFIQTGISAIDGLNALLRGQKLPIFSGSGLPANMLA 163          
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_SULIN (V-type ATP synthase beta chain OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=atpB PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.706e-35
Identity = 72/158 (45.57%), Postives = 104/158 (65.82%), Query Frame = 1
Query:  136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609
            E+  ++ + GPL+ +  V    Y E+V I + +G  RRG V++     A+VQVFEGT+G+    T ++  G  L+  +S +MLGRIFN  G  +DNGPP++     DI+GS +NP+ R YPEE IQTGIS ID +N++ RGQK+P+FS +GLP N +A
Sbjct:    6 EFSNISMIKGPLIYVQGVTDASYNELVEIEMPNGEKRRGLVIDSQMGIAIVQVFEGTTGVSPTGTKIRMLGRGLEVKISEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAAREYPEEFIQTGISAIDGLNALLRGQKLPIFSGSGLPANMLA 163          
The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
VATB_PYRIL7.660e-3646.01V-type ATP synthase beta chain OS=Pyrobaculum isla... [more]
VATB_PYRAE7.660e-3646.63V-type ATP synthase beta chain OS=Pyrobaculum aero... [more]
VATB_DEIDV7.660e-3647.47V-type ATP synthase beta chain OS=Deinococcus dese... [more]
VATB_THENN1.307e-3546.20V-type ATP synthase beta chain OS=Thermotoga neapo... [more]
VATB_SULSO1.307e-3546.20V-type ATP synthase beta chain OS=Sulfolobus solfa... [more]
VATB_PYRAR1.307e-3546.63V-type ATP synthase beta chain OS=Pyrobaculum arse... [more]
VATB_HALOH1.307e-3546.20V-type ATP synthase beta chain OS=Halothermothrix ... [more]
VATB_THENV1.706e-3546.63V-type ATP synthase beta chain OS=Thermoproteus ne... [more]
VATB_SULIY1.706e-3545.57V-type ATP synthase beta chain OS=Sulfolobus islan... [more]
VATB_SULIN1.706e-3545.57V-type ATP synthase beta chain OS=Sulfolobus islan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F14_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bp
CTCTCTCTTTCTCTCTCTCTCTCACACACACTCACAGAGATCACAAGAAA
GACCAAAAAAAAAGAAAAAAAATTGAAAATGGGTGTGGCACAAAACAATG
TTGACATGGAGGAGGGTACGCTGGAAGTCGCCATGGAGTACAGAACGGTC
ACCGGAGTTGCTGGGCCTCTAGTTATCCTTGATAAAGTCAAGGGACCCAA
ATATTATGAGATTGTCAATATTCGGTTGGGAGATGGAACAATGCGACGTG
GTCAGGTCCTAGAAGTTGATGGAGAGAAAGCTGTTGTTCAGGTCTTTGAA
GGGACATCCGGAATTGACAATAAATTTACAACTGTGCAGTTTACAGGGGA
GGTTCTGAAGACTCCTGTCTCATTGGATATGCTTGGGCGCATTTTTAATG
GTTCTGGGAAACCCATTGATAATGGTCCCCCAATTTTGCCGGAGGCTTAC
TTGGATATATCCGGAAGTTCTATCAACCCTAGTGAGAGAACCTATCCTGA
AGAGATGATACAGACAGGGATTTCTACCATTGATGTGATGAACTCCATTG
CTAGAGGACAAAAGATCCCTCTTTTTTCTGCTGCCGGTCTTCCCCATAAT
GAAATTGCTGC
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