DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_ANADF (V-type ATP synthase beta chain OS=Anaeromyxobacter sp. (strain Fw109-5) GN=atpB PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.159e-30 Identity = 68/161 (42.24%), Postives = 96/161 (59.63%), Query Frame = 1 Query: 127 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 V R +AGPL+ L+ V + E+V IR+ G RRGQ++E+ G + VQV E T G+ V TGEV VS MLGR+ +G G+P D P + EA L I G+++N + R P + I+TG+S ID +N++ RGQK+P+FS AGLP +A Sbjct: 4 VTRRVRGADAIAGPLLFLEGVPRARLGELVRIRMAGGEERRGQIIELSGARVAVQVLEETRGLAPARAEVTLTGEVATLAVSRGMLGRVLDGLGRPTDGLPAPIAEARLPIHGAALNVTRREKPADFIETGVSAIDGLNTLVRGQKLPVFSCAGLPAGRLA 164
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB2_TREPA (V-type ATP synthase beta chain 2 OS=Treponema pallidum GN=atpB2 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.020e-28 Identity = 61/157 (38.85%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 YR ++ + GP+V+ + +G Y EI IR G +R G+++++ E ++QVF T G+ ++F ++ V ++GR+F+G G+PID P +L +++G INP R YP + IQTGIS ID MN++ RGQK+P+FS GL HN +A Sbjct: 6 YRGLSSIDGPIVVAKRREGAFYGEITAIRDRFGALRTGRIIDLSQECCLIQVFGSTLGLSLDGACLEFLDVPMQLRVCEGLMGRVFDGLGRPIDGFPEVLSSQLRNVNGYPINPYARVYPRDFIQTGISAIDGMNTLIRGQKLPIFSGNGLAHNRLA 162
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METTL (V-type ATP synthase beta chain (Fragment) OS=Methanococcus thermolithotrophicus GN=atpB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.678e-28 Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 1 Query: 328 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 T V+FTGE K VSL+MLGRIFNG+GKPID GP I+PE LDI+G +NP R P +QTGISTID N++ RGQK+P+FS +GLPHN +A Sbjct: 5 TKVRFTGETAKIGVSLEMLGRIFNGAGKPIDGGPEIIPEKKLDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKLPIFSGSGLPHNTLA 98
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_ANASK (V-type ATP synthase beta chain OS=Anaeromyxobacter sp. (strain K) GN=atpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.810e-27 Identity = 68/168 (40.48%), Postives = 98/168 (58.33%), Query Frame = 1 Query: 127 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGD-------GTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 V R G+AGPL+ L+ V + E+V IR G+ R GQV+ + ++ VQV E T G+ V TG+V + VS MLGR+ +G G+P D PP +PEA I G+++N + R P + I+TG+S ID MN++ RGQK+P+FS AGLP + +A Sbjct: 4 VTRRIRGALGIAGPLLFLEGVPRARLGEVVRIR-GEPEAHGRAAEERSGQVIALSRDRIAVQVLEETRGLAPARAEVTLTGQVARLGVSRGMLGRVLDGLGRPADGLPPPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMNTLVRGQKLPVFSCAGLPASRLA 170
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_ANAD2 (V-type ATP synthase beta chain OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=atpB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.810e-27 Identity = 68/168 (40.48%), Postives = 98/168 (58.33%), Query Frame = 1 Query: 127 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGD-------GTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 V R G+AGPL+ L+ V + E+V IR G+ R GQV+ + ++ VQV E T G+ V TG+V + VS MLGR+ +G G+P D PP +PEA I G+++N + R P + I+TG+S ID MN++ RGQK+P+FS AGLP + +A Sbjct: 4 VTRRIRGALGIAGPLLFLEGVPRARLGEVVRIR-GEPEANGRAAEERSGQVIALSRDRIAVQVLEETRGLAPARAEVTLTGQVARLGVSRGMLGRVLDGLGRPADGLPPPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMNTLVRGQKLPVFSCAGLPASRLA 170
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_ANADE (V-type ATP synthase beta chain OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=atpB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.500e-27 Identity = 67/168 (39.88%), Postives = 99/168 (58.93%), Query Frame = 1 Query: 127 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGD-------GTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 V R G+AGPL+ L+ V + E+V IR G+ R GQV+ + ++ VQV E T G+ + V TG+V + V+ MLGR+ +G G+P D PP +PEA I G+++N + R P + I+TG+S ID MN++ RGQK+P+FS AGLP + +A Sbjct: 4 VTRRIRGALGIAGPLLFLEGVPRARLGEVVRIR-GEPEASGRAAEERSGQVIALSRDRIAVQVLEETRGLAPARSEVTLTGQVARLGVARGMLGRVLDGLGRPADGLPPPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMNTLVRGQKLPVFSCAGLPASRLA 170
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_BORAP (V-type ATP synthase beta chain OS=Borrelia afzelii (strain PKo) GN=atpB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.150e-24 Identity = 58/156 (37.18%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y + +AG ++ + +G KY E+ ++ D T +V+++D EK +QV+ GT G+ ++F G ++ S ++LGRIF+GSG P D GP L + ++I G S NP++R P MI+TG+ IDV N++ QK+P+FS +G P+NE+ Sbjct: 5 YSKIESIAGNVITVT-AQGIKYGELAIVKAKD-TSSLAEVIKLDREKVSLQVYGGTRGVSTS-DEIKFLGHTMQVSFSDNLLGRIFDGSGNPRDGGPS-LDDNLIEIGGPSANPTKRIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNEL 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_BORBZ (V-type ATP synthase beta chain OS=Borrelia burgdorferi (strain ZS7) GN=atpB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.784e-24 Identity = 58/156 (37.18%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y + +AG ++ + +G KY E+ ++ D T +V+++D EK +QV+ GT G+ ++F G ++ S ++LGRIF+GSG P D GP L + ++I G S NP++R P MI+TG+ IDV N++ QK+P+FS +G P+NE+ Sbjct: 5 YSKIESIAGNVITVT-AQGIKYGELAIVKAKD-TSSLAEVIKLDREKVSLQVYGGTRGVSTS-DEIKFLGHSMQVSFSDNLLGRIFDGSGNPRDGGPS-LDDNLIEIGGPSANPTKRIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNEL 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_BORBU (V-type ATP synthase beta chain OS=Borrelia burgdorferi GN=atpB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.784e-24 Identity = 58/156 (37.18%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y + +AG ++ + +G KY E+ ++ D T +V+++D EK +QV+ GT G+ ++F G ++ S ++LGRIF+GSG P D GP L + ++I G S NP++R P MI+TG+ IDV N++ QK+P+FS +G P+NE+ Sbjct: 5 YSKIESIAGNVITVT-AQGIKYGELAIVKAKD-TSSLAEVIKLDREKVSLQVYGGTRGVSTS-DEIKFLGHSMQVSFSDNLLGRIFDGSGNPRDGGPS-LDDNLIEIGGPSANPTKRIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNEL 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_BORGA (V-type ATP synthase beta chain OS=Borrelia garinii GN=atpB PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.498e-23 Identity = 59/156 (37.82%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y + +AG ++ + +G KY E+ ++ D T +V+++D EK +QV+ GT GI ++F G ++ S ++LGRIF+GSG P D GP L + ++I G S NP++R P MI+TG+ IDV N++ QK+P+FS +G P+NE+ Sbjct: 5 YSKIECIAGNVITVT-AQGIKYGELAIVKAKD-TSSLAEVIKLDREKVSLQVYGGTRGISTS-DEIKFLGHSMQVSFSDNLLGRIFDGSGNPRDGGPS-LDDNLIEIGGPSANPAKRIVPRNMIRTGLPMIDVFNTLVESQKLPIFSVSGEPYNEL 156 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |