DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_BORHD (V-type ATP synthase beta chain OS=Borrelia hermsii (strain DAH) GN=atpB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.268e-22 Identity = 57/156 (36.54%), Postives = 93/156 (59.62%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y + + G ++ + + KY E+ ++ D T +V+++D EK +QV+ GT GI V+F G ++ S ++ GRIF+G+G P D GP L + ++I G S+NP++R P MI+TGI IDV N++ QK+P+FS +G P+NE+ Sbjct: 5 YSKIESIVGNVITV-MAQNVKYGELAIVKSKD-TSSLAEVIKLDREKVSLQVYNGTIGISTA-DEVKFLGHPMQVTFSENLFGRIFDGAGNPKDGGPR-LEDNLIEIGGPSVNPAKRIVPRNMIRTGIPMIDVFNTLVESQKLPVFSVSGEPYNEL 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_BORT9 (V-type ATP synthase beta chain OS=Borrelia turicatae (strain 91E135) GN=atpB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.164e-22 Identity = 57/156 (36.54%), Postives = 93/156 (59.62%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y + + G ++ + + KY E+ +R D + +V+++D +K +QV+ GT GI V+F G ++ S ++LGRIF+G+G P D GP L + ++I G S NP++R P MI+TGI IDV N++ QK+P+FS +G P+NE+ Sbjct: 5 YSKIESIVGNVITV-MAQNVKYGELAIVRSKDSSSL-AEVIKLDRDKVSLQVYNGTIGISTA-DEVKFLGHPMQVTFSENLLGRIFDGAGNPKDGGPR-LEDDLIEIGGPSANPAKRIVPRNMIRTGIPMIDVFNTLVESQKLPIFSVSGEPYNEL 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_TREDE (V-type ATP synthase beta chain OS=Treponema denticola GN=atpB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.222e-22 Identity = 58/156 (37.18%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y + + G ++ + K G Y E+ ++ G +V +++G+ +QVF G G+ V+F G+ ++ S D+LGRIFNGSG P D+GP L + + I G S+NPS+R MI+TGI IDV N++ QK+P+FS++G P+NE+ Sbjct: 5 YSKIESINGSVITV-KADGVSYGELAEVQTRFGASL-AEVNKLEGDLVSLQVFAGGRGVSTG-DEVRFLGKEMQVSYSEDLLGRIFNGSGDPRDSGPA-LKDNMIPIGGPSVNPSKRILANRMIRTGIPMIDVFNTLVVSQKLPIFSSSGEPYNEL 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB1_TREPA (V-type ATP synthase beta chain 1 OS=Treponema pallidum GN=atpB1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.124e-21 Identity = 58/156 (37.18%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y + + G ++ + + KG Y E+ ++ G +V +++G+ +QVF G GI + V+F G + S +LGRIFNGSG P D GP L E ++I G S+NP++R MI+TGI IDV N++ QK+P+FS++G P+NE+ Sbjct: 5 YEKIESINGSVITV-RAKGVHYGELARVKTAFGDSL-AEVNKLEGDVVSLQVFAGGRGISTG-SEVRFLGRGMLVSFSDYLLGRIFNGSGVPRDGGPA-LKEGRVEIGGPSVNPAKRVIARRMIRTGIPMIDVFNTLVVSQKLPIFSSSGEPYNEL 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CHLMU (V-type ATP synthase beta chain OS=Chlamydia muridarum GN=atpB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.329e-21 Identity = 59/156 (37.82%), Postives = 84/156 (53.85%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y +T + G L+ ++ +G E+V I DG VL D +K +QVF GTSG+ V F G ++ +LGR FNG+GKPIDN E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + Sbjct: 5 YTRITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDKVV-FLGRPMEVVYGDSLLGRRFNGTGKPIDNEEICFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNAL 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_PARUW (V-type ATP synthase beta chain OS=Protochlamydia amoebophila (strain UWE25) GN=atpB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.090e-21 Identity = 55/156 (35.26%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y + + G L+ + +G E+ I L DG VL +DG++ +QVF+ T GI V F ++ +LGR +G+G PID GP ++ E+ +DI +S NP +R P +M++T I IDV N + + QKIP+FS G P+N + Sbjct: 5 YDRINNMRGNLITIT-AEGVSLGELARIDLKDGRNIYASVLRIDGDQVTLQVFQTTRGISTS-DQVTFLNRQMQAVYGDTLLGRRLSGTGLPIDGGPQVIGES-IDIGSTSFNPVKRIVPRDMVRTNIPMIDVFNCLVKSQKIPIFSVPGEPYNAL 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CHLTB (V-type ATP synthase beta chain OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=atpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.645e-20 Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y +T + G L+ ++ +G E+V I DG VL D K +QVF GTSG+ + F G ++ +LGR FNG+GKPID+ E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + Sbjct: 5 YTKITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDARKVTLQVFGGTSGLSTGDKVI-FLGRPMEVIYGDSLLGRRFNGTGKPIDHEDECFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNAL 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CHLT2 (V-type ATP synthase beta chain OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=atpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.645e-20 Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y +T + G L+ ++ +G E+V I DG VL D K +QVF GTSG+ + F G ++ +LGR FNG+GKPID+ E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + Sbjct: 5 YTKITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDARKVTLQVFGGTSGLSTGDKVI-FLGRPMEVIYGDSLLGRRFNGTGKPIDHEDECFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNAL 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CHLTR (V-type ATP synthase beta chain OS=Chlamydia trachomatis GN=atpB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.454e-20 Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y +T + G L+ ++ +G E+V I DG VL D K +QVF GTSG+ + F G ++ +LGR FNG+GKPID E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + Sbjct: 5 YTKITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDARKVTLQVFGGTSGLSTGDKVI-FLGRPMEVIYGDSLLGRRFNGTGKPIDREDECFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNAL 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CHLTA (V-type ATP synthase beta chain OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=atpB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.454e-20 Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y +T + G L+ ++ +G E+V I DG VL D K +QVF GTSG+ + F G ++ +LGR FNG+GKPID E + I+ S NP R P EM++T I ID+ N + + QKIP+FS++G HN + Sbjct: 5 YTKITDIKGNLITVE-AEGASLGELVQIERADGRSSYASVLRFDARKVTLQVFGGTSGLSTGDKVI-FLGRPMEVIYGDSLLGRRFNGTGKPIDREDECFGEP-IPITTPSFNPVCRIVPREMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNAL 157 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |