DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CHLPN (V-type ATP synthase beta chain OS=Chlamydia pneumoniae GN=atpB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y +T + G L+ ++ +G + E+ I DG VL D +K +QVF GTSG+ V F G ++ +LGR NG GKPIDN E ++I+ + NP R P M++T I IDV N + + QKIP+FS++G HN + Sbjct: 5 YTKITDIKGNLITVE-AEGARLGELATITRSDGRSSYASVLRFDLKKVTLQVFGGTSGLSTG-DHVTFLGRPMEVTFGSSLLGRRLNGIGKPIDNEGECFGEP-IEIATPTFNPVCRIVPRSMVRTNIPMIDVFNCLVKSQKIPIFSSSGEHHNAL 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CHLAB (V-type ATP synthase beta chain OS=Chlamydophila abortus GN=atpB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.988e-19 Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y +T + G L+ ++ +G + E+ I DG VL D +K +QVF GTSG+ V F G ++ ++GR NG GKPID + ++IS + NP R P +M++T I IDV N + + QKIP+FS++G HN + Sbjct: 5 YTKITDIKGNLITVE-AEGARLGELAEIERVDGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDRVV-FLGRSMEVTYGESLIGRRLNGVGKPIDGEGECFGDP-IEISTPTFNPVCRVVPRDMVRTNIPMIDVFNCLVKSQKIPIFSSSGEKHNAL 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CHLCV (V-type ATP synthase beta chain OS=Chlamydophila caviae GN=atpB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.451e-18 Identity = 56/161 (34.78%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDN-----GPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y +T + G L+ ++ +G + E+ I DG VL D +K +QVF GTSG+ + F G ++ ++GR NG GKPID G PI IS + NP R P +M++T I IDV N + + QKIP+FS++G HN + Sbjct: 5 YTKITDIKGNLITVE-AEGARLGELAEIERVDGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDRVI-FLGRSMEVTYGESLIGRRLNGVGKPIDGEGECFGDPIA------ISTPTFNPVCRVVPRDMVKTNIPMIDVFNCLVKSQKIPIFSSSGESHNAL 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CHLFF (V-type ATP synthase beta chain OS=Chlamydophila felis (strain Fe/C-56) GN=atpB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.229e-17 Identity = 54/161 (33.54%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 139 YRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDN-----GPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 606 Y +T + G L+ ++ +G + E+ I DG VL D +K +QVF GTSG+ + F G ++ ++GR +G GKPID G PI IS + NP R P +M++T I ID+ N + + QKIP+FS++G HN + Sbjct: 5 YTKITDIKGNLITVE-AEGARLGELAEIERVDGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDRVI-FLGRAMEVTYGESLIGRRLSGIGKPIDGEGECFGDPIA------ISTPTFNPVCRIVPRDMVRTNIPMIDMFNCLVKSQKIPIFSSSGENHNAL 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CLOCE (ATP synthase subunit beta OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=atpD PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.976e-13 Identity = 44/150 (29.33%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 148 VTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 + V GP++ + G P Y + I GT+ + + + T G+ + TG+ + PV ++LGRIFN G+P+D P+ P AYL I + + E+ E+++TGI +D++ A+G KI LF AG+ Sbjct: 8 IVQVIGPVLDIRFENGILPDIYNAIKIPADSGTVTAEVMQHLGNDTVRCVAMSSTDGLVRGMKA-EDTGDAITVPVGKEVLGRIFNVLGEPVDKAGPVEPTAYLPIHREAPSLEEQRPSTEILETGIKVVDLLAPYAKGGKIGLFGGAGV 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CLOTH (ATP synthase subunit beta OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpD PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.030e-12 Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 1 Query: 145 TVTGVAGPLVIL--DKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 TV + GP++ + ++ K P Y + I +G +V++ G V V T G+ V TGE +K PV ++LGR+FN G+PID + YL I + E+ E+++TGI ID++ A+G KI LF AG+ Sbjct: 8 TVVQIIGPVIDIRFERGKLPSIYNAIKIN-SEGIDIVAEVMQYTGNDTVRCVSMNSTDGLKRGMKAVD-TGEPIKVPVGKEVLGRVFNVLGEPIDGKGDVKATTYLPIHREAPGLDEQKPVTEILETGIKVIDLLAPYAKGGKIGLFGGAGV 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: FLII_BUCAI (Flagellum-specific ATP synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fliI PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.651e-12 Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 253 QVLEVDGEKAVVQVFEGTSGI---DNKFTTVQFTGE--VLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 +V+ GEK + FE GI F+ + + K P+ +++LGR+ +G G+P+D P I + Y I SINP RT E++ TGI I+ + +I RGQKI +FS++G+ Sbjct: 82 EVIGFSGEKTFLLSFEDIHGIFPGARVFSKIASNSNFFIKKLPLGMELLGRVLDGRGQPLDQLPKIDHKYYSTIKNYSINPLNRTPITEVLDTGIRAINGLLTIGRGQKIGIFSSSGI 199
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_LACRJ (ATP synthase subunit beta OS=Lactobacillus reuteri (strain JCM 1112) GN=atpD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.713e-12 Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 148 VTGVAGPLVILD---KVKGPKYYEIVNIRLGDG-TMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA-YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 V V GP+V ++ K P+ + + I+ DG T+ LE+ +GT G+ V+ TG + PV D LGR+FN G+P+DNGP P+A + I + + E+++TGI ID++ RG KI LF AG+ Sbjct: 6 VLQVIGPVVDVEFPLDEKLPEINDALKIKESDGKTLTTEVALELGDGVVRTIAMDGTDGLQRGME-VENTGASISVPVGDDTLGRVFNVLGEPVDNGPKFGPDAKRMPIHRDAPKYDDLNNATEILETGIKVIDLLAPYVRGGKIGLFGGAGV 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_LACRD (ATP synthase subunit beta OS=Lactobacillus reuteri (strain DSM 20016) GN=atpD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.713e-12 Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 148 VTGVAGPLVILD---KVKGPKYYEIVNIRLGDG-TMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEA-YLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 V V GP+V ++ K P+ + + I+ DG T+ LE+ +GT G+ V+ TG + PV D LGR+FN G+P+DNGP P+A + I + + E+++TGI ID++ RG KI LF AG+ Sbjct: 6 VLQVIGPVVDVEFPLDEKLPEINDALKIKESDGKTLTTEVALELGDGVVRTIAMDGTDGLQRGME-VENTGASISVPVGDDTLGRVFNVLGEPVDNGPKFGPDAKRMPIHRDAPKYDDLNNATEILETGIKVIDLLAPYVRGGKIGLFGGAGV 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_THICR (ATP synthase subunit beta OS=Thiomicrospira crunogena (strain XCL-2) GN=atpD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 46/151 (30.46%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 148 VTGVAGPLVILDKVKG---PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 + + GP++ ++ KG PK Y+ + + D T+ +V + G+ V + G+S + V TGE + PV LGRIF+ G PIDN P+ E + I + E +E+++TG+ ID++ A+G K+ LF AG+ Sbjct: 5 IVQIIGPVIDVE-FKGADLPKIYDALKVDELDLTL---EVQQQVGDNVVRAIAMGSSDGLKRGMAVSNTGEAISVPVGKPTLGRIFDVLGNPIDNAGPVESEEKMTIHRPAPAFDELAASQELLETGVKVIDLICPFAKGGKVGLFGGAGV 151 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |