DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CHLLI (ATP synthase subunit beta OS=Chlorobium limicola GN=atpD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 46/156 (29.49%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 M+ ++ + GP+V +D +G P + + + DG+ + + GE+ V ++ EGT G+ + TG+ ++ PV ++LGR+ N G PID P+L + I ++ E + EM +TGI ID++ +RG K LF AG+ Sbjct: 1 MQEGKISQIIGPVVDVDFAEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRRIAMEGTDGLVRGMSAKN-TGKPIQVPVGEEVLGRMLNVVGDPIDGKGPVLSKKSYSIHRTAPKFDELSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGV 155
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: HRPB6_XANEU (Probable ATP synthase hrpB6 OS=Xanthomonas euvesicatoria GN=hrpB6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11 Identity = 48/170 (28.24%), Postives = 85/170 (50.00%), Query Frame = 1 Query: 91 QNNVDMEEGTLEVAMEYRTVTGVAGPLVILDKVKGPKYY--EIVNIRLGDGTM-RRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 + ++ E TL V Y V V G ++ KV G + E+ +R DGT+ +R +V+ + A++ F G+ + T V G L PV +LGR+ +G G+P D I + ++ I + +P R E + TG+ +D + ++ GQ++ +F+AAG+ Sbjct: 9 ETTLERELATLAVGRRYGKVVEVVGTML---KVAGVQVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGELIGLSRE-TRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAIACDTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGV 174
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CLOBB (ATP synthase subunit beta OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=atpD PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.931e-11 Identity = 47/150 (31.33%), Postives = 69/150 (46.00%), Query Frame = 1 Query: 148 VTGVAGPLVIL--DKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 V V GP+V + D P Y ++I +G+ T+ V + E T G+ V T + + PV +LGR+FN GKPIDN + E I + + ++ EM +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFDSDSLPNLYNAISIDMGERTLIAEVEQHVGDDIVRTIAMEATEGLKRGMDAVD-TEKAISVPVGDQVLGRLFNVLGKPIDNAGEVEAEEIYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAPYQRGGKIGLFGGAGV 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CLOAB (ATP synthase subunit beta OS=Clostridium acetobutylicum GN=atpD PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.931e-11 Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 1 Query: 148 VTGVAGPLVIL--DKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 + V GP+V + D P Y + I +GD +V + G+ V + EGT G+ V TG+ + PV ++LGR+FN G+ ID + + Y I + E++ EM +TGI ID++ +G KI LF AG+ Sbjct: 8 IVQVIGPVVDIKFDAENLPDIYNSIEIDMGDNKKLIAEVEQHVGDDIVRTIAMEGTDGLKRGMEAVN-TGKPISVPVGENVLGRLFNVLGQTIDEAGDMNADKYYPIHRPAPTFEEQSVQPEMFETGIKVIDLLAPYQKGGKIGLFGGAGV 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CLOPS (ATP synthase subunit beta OS=Clostridium perfringens (strain SM101 / Type A) GN=atpD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11 Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = 1 Query: 148 VTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 V V GP+V + P + ++I++ DG + +V + G+ V + E T G+ V TG + PV +LGRIFN GKP+D+G + E I + + E++ +M +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEGLRRGVEAVD-TGAPISVPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGV 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CLOPE (ATP synthase subunit beta OS=Clostridium perfringens GN=atpD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11 Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = 1 Query: 148 VTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 V V GP+V + P + ++I++ DG + +V + G+ V + E T G+ V TG + PV +LGRIFN GKP+D+G + E I + + E++ +M +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEGLRRGVEAVD-TGAPISVPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGV 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CLOP1 (ATP synthase subunit beta OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11 Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = 1 Query: 148 VTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 V V GP+V + P + ++I++ DG + +V + G+ V + E T G+ V TG + PV +LGRIFN GKP+D+G + E I + + E++ +M +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEGLRRGVEAVD-TGAPISVPVGECVLGRIFNVLGKPLDSGAEVNNEEKYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGV 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CLOBA (ATP synthase subunit beta OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=atpD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11 Identity = 47/150 (31.33%), Postives = 69/150 (46.00%), Query Frame = 1 Query: 148 VTGVAGPLVIL--DKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 V V GP+V + D P Y ++I +G+ T+ V + E T G+ V T + + PV +LGR+FN GKPIDN + E I + + ++ EM +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFDSDSLPNLYNAISIDMGERTLIAEVEQHVGDDIVRTIAMEATEGLKRGMDAVD-TEKAISVPVGDKVLGRLFNVLGKPIDNAGEVEAEEIYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAPYQRGGKIGLFGGAGV 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_PSEHT (ATP synthase subunit beta OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=atpD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11 Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 1 Query: 196 PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 P Y+ + + GD T +V + G V + GT+ + +V TGE ++ PV LGRI N G+PID PI E + I ++ E++ E+++TGI ID++ A+G K+ LF AG+ Sbjct: 24 PAVYDALRVTDGDLTGLTLEVQQQLGGGVVRTIAMGTTDGLRRGASVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEEDRMSIHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGV 155
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_PELPB (ATP synthase subunit beta OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=atpD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11 Identity = 48/156 (30.77%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 M+ ++ + GP+V +D +G P + + + DGT + + GE+ V V E T G+ V TG+ ++ PV L++LGR+ N G PID P+ + I + E + EM +TGI ID++ +RG K LF AG+ Sbjct: 1 MQEGKISQIIGPVVDVDFPEGRLPSILDALTVTRADGTKLVLETQQHLGEERVRTVAMESTDGLVRGMN-VTHTGKPIQVPVGLEVLGRMLNVVGDPIDGRGPVNTKKSYSIHRLAPRFDEISTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGV 155 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |