DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_CHLP8 (ATP synthase subunit beta OS=Chlorobaculum parvum (strain NCIB 8327) GN=atpD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11 Identity = 46/156 (29.49%), Postives = 78/156 (50.00%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 M+ ++ + GP+V +D +G P + + + DG+ + + GE+ V + EGT G+ + TG ++ PV ++LGR+ N G+PID P+ + I S+ E + EM +TGI ID++ +RG K LF AG+ Sbjct: 1 MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRTISMEGTDGLVRGMSVAN-TGRPIQAPVGAEVLGRMLNVVGEPIDGKGPVPSKKSYPIHRSAPKFDELSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGV 155
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPA2_RHOS4 (ATP synthase subunit alpha 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpA2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11 Identity = 42/139 (30.22%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 148 VTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 564 + +A LV ++ + G + E+V G G VL +D E V + + + + + T V+ TG++L PV +LGR+ + G+P+D P ILPEA L+I + +R E ++TG+ +D + ++ RGQ+ Sbjct: 29 IATLADGLVEVEGLPGARLGEVVRFAGG----AEGLVLTLDPETVQVALLDPGAALGSG-TEVRRTGQLLSVPVGQGLLGRVVDPLGRPLDGLPAILPEARLEIERPAPGIVDRDMVAEPVETGLLVVDALFAVGRGQR 162
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPA2_RHOS1 (ATP synthase subunit alpha 2 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpA2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11 Identity = 42/139 (30.22%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 148 VTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 564 + +A LV ++ + G + E+V G G VL +D E V + + + + + T V+ TG++L PV +LGR+ + G+P+D P ILPEA L+I + +R E ++TG+ +D + ++ RGQ+ Sbjct: 29 IATLADGLVEVEGLPGARLGEVVRFAGG----AEGLVLTLDPETVQVALLDPGAALGSG-TEVRRTGQLLSVPVGQGLLGRVVDPLGRPLDGLPAILPEARLEIERPAPGIVDRDMVAEPVETGLLVVDALFAVGRGQR 162
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_NOSP7 (ATP synthase subunit beta OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11 Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 1 Query: 148 VTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVD-------GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 +T + GP+V + K G K +I N GT GQ + + G+ V V T G+ F TG + PV LGRIFN G+P+DN P+ EA L I S+ ++ + +TGI +D++ RG KI LF AG+ Sbjct: 13 ITQIIGPVVDV-KFPGGKLPQIYNALKIVGTNESGQEINITVEVQQLLGDNQVRTVAMSSTEGLVRGFEVTD-TGAPITVPVGKATLGRIFNVLGEPVDNRGPVNAEASLPIHRSAPKFTDLETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGV 166
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_LACPL (ATP synthase subunit beta OS=Lactobacillus plantarum GN=atpD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11 Identity = 50/153 (32.68%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 148 VTGVAGPLVILDKVKGPKYYEIVNIRL----GDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLD-ISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 V V GP+V ++ K +I N + D T+ LE+ +GT G+ + TV+ TG + PV + LGR+FN G+ ID GP P+A + I + E T E+++TGI ID++ RG KI LF AG+ Sbjct: 6 VVQVIGPVVDVEFSLNDKLPDINNALIIQKDNDDTLTVEVSLELGDGVVRTVAMDGTDGL-RRGMTVEDTGSSITVPVGKETLGRVFNVLGETIDGGPEFGPDAERNPIHRDAPKYDELTTSTEVLETGIKVIDLLAPYVRGGKIGLFGGAGV 157
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_COLP3 (ATP synthase subunit beta OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=atpD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11 Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 196 PKYYEIVNIRLGDGTMRRGQVLEVD---GEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 P+ Y+ + I GD G VLEV G V + GTS + V TG+ ++ PV ++ LGRI N G+PID PI + I + +E++ E+++TGI ID++ A+G K+ LF AG+ Sbjct: 24 PQVYDALKITEGD---LEGLVLEVQQQLGGGVVRTIAMGTSDGLRRGLNVVNTGQGIQVPVGVETLGRIMNVLGEPIDEAGPIGEKDRWSIHREAPAYAEQSMSNELLETGIKVIDLVCPFAKGGKVGLFGGAGV 155
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB2_PSEA6 (ATP synthase subunit beta 2 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=atpD2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11 Identity = 46/135 (34.07%), Postives = 68/135 (50.37%), Query Frame = 1 Query: 196 PKYYEIVNIRLGDGTMRRGQVLEVD---GEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 PK Y+ + I GD +G LEV G V + GT+ + TV TGE ++ PV LGRI + G PID PI E + I + +++ E+++TGI ID++ A+G K+ LF AG+ Sbjct: 24 PKIYDALRITEGD---LQGLTLEVQQQLGGGVVRTIALGTTDGLRRGLTVDNTGEAIQVPVGKATLGRIMDVLGNPIDEAGPIGEEERMSIHREAPTYEDQSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGV 155
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_TOLAT (ATP synthase subunit beta OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=atpD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11 Identity = 46/135 (34.07%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 196 PKYYEIVNIRLGDGTMRRGQVLEVD---GEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 PK Y+ + I + +G +G V+EV G V + GTS + V TGE +K PV + LGRI N G+P+D PI E I + + +++ E+++TGI ID++ A+G K+ LF AG+ Sbjct: 24 PKVYDALKI-VSEG-QSKGLVMEVQQQIGGGVVRCIAMGTSDGLRRGAEVSNTGEAIKVPVGMKTLGRIMNVLGEPVDEQGPIGAEDNWVIHREAPSYEDQSSATELLETGIKVIDLICPFAKGGKVGLFGGAGV 156
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB_PORYE (ATP synthase subunit beta, chloroplastic OS=Porphyra yezoensis GN=atpB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11 Identity = 46/152 (30.26%), Postives = 77/152 (50.66%), Query Frame = 1 Query: 145 TVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 +VT + GP++ + G PK + + ++ +GT+ +V ++ G+ V V T G+ + TG + PV D LGRIFN G+P+DN P+ E+ L I + ++ + +TGI +D++ RG KI LF AG+ Sbjct: 10 SVTQIIGPVLDIAFPNGQLPKVFNALKVQSSEGTITC-EVQQLLGDNKVRAVSMSSTEGLQRGVEVID-TGSPISVPVGTDTLGRIFNVLGEPVDNLGPVDSESTLPIHRPAPAFTKLETKPNIFETGIKVVDLLAPYRRGGKIGLFGGAGV 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: ATPB2_CHLTE (ATP synthase subunit beta 2 OS=Chlorobium tepidum GN=atpD2 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11 Identity = 46/156 (29.49%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 591 M+ ++ + GP+V +D +G P + + + DG+ + + GE+ V + EGT G+ + V TG+ ++ PV ++LGR+ N G PID P+ + I ++ E + EM +TGI ID++ +RG K LF AG+ Sbjct: 1 MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRTIAMEGTDGLVRGMSAVN-TGKPIQVPVGGEVLGRMLNVVGDPIDGKGPVPAKKTYSIHRAAPKFDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGV 155 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |