DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_STRP4 (V-type ATP synthase beta chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=atpB PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.542e-49 Identity = 91/163 (55.83%), Postives = 125/163 (76.69%), Query Frame = 1 Query: 121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 + V EYRT + V GPL+I+++V Y E+V I+L +G +RRGQVLE+ +KA+VQ+FEG+SGI+ + + ++F G L+ VS DM+GRIFNG GKPID GP ++PE YLDI G +INP R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+A Sbjct: 1 MSVIKEYRTASEVVGPLMIVEQVNNVSYNELVEIQLHNGEIRRGQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELA 163
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_PYRAB (V-type ATP synthase beta chain OS=Pyrococcus abyssi GN=atpB PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.346e-48 Identity = 91/163 (55.83%), Postives = 120/163 (73.62%), Query Frame = 1 Query: 121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 +E++ EY T++ + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFEGT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++A Sbjct: 2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLA 164
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METMA (V-type ATP synthase beta chain OS=Methanosarcina mazei GN=atpB PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.346e-48 Identity = 94/161 (58.39%), Postives = 125/161 (77.64%), Query Frame = 1 Query: 127 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 +A EY+T+T +AGPL+ ++K + Y EIVNI++GDGT+RRGQVL+ + VVQVFEGT G+D K V FTGE LK P S+D+LGRI +GSG+P D GP I+P+ LDI+G+++NP R P++ IQTGISTID N++ RGQK+P+FSA+GLPHNEIA Sbjct: 1 MAKEYKTITQIAGPLIFVEKTEPVGYNEIVNIKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLD-KDCGVIFTGETLKLPASVDLLGRILSGSGEPRDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIA 160
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_PYRHO (V-type ATP synthase beta chain OS=Pyrococcus horikoshii GN=atpB PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.998e-48 Identity = 90/163 (55.21%), Postives = 120/163 (73.62%), Query Frame = 1 Query: 121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 ++++ EY T++ + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFEGT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++A Sbjct: 2 MKMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENMAIVQVFEGTRDLDIKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLA 164
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_DESSY (V-type ATP synthase beta chain OS=Desulfurococcus sp. (strain SY) GN=atpB PE=3 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 2.998e-48 Identity = 93/159 (58.49%), Postives = 116/159 (72.96%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 MEY TV+ + GPL+I++ VKG Y E+V I G R+GQVLE A+VQVFEGT +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +A Sbjct: 4 MEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLA 162
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THESI (V-type ATP synthase beta chain OS=Thermococcus sp. (strain KI) GN=atpB PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.916e-48 Identity = 93/159 (58.49%), Postives = 115/159 (72.33%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 MEY TV+ + GPL+I+ VKG Y E+V I G R+GQVLE + A+VQVFEGT +D K T V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +A Sbjct: 4 MEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEAREDMAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLA 162
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_PYRKO (V-type ATP synthase beta chain OS=Pyrococcus kodakaraensis GN=atpB PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.916e-48 Identity = 93/159 (58.49%), Postives = 115/159 (72.33%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 MEY TV+ + GPL+I+ VKG Y E+V I G R+GQVLE + A+VQVFEGT +D K T V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +A Sbjct: 6 MEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEAREDMAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLA 164
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METST (V-type ATP synthase beta chain OS=Methanosphaera stadtmanae (strain DSM 3091) GN=atpB PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.916e-48 Identity = 98/172 (56.98%), Postives = 124/172 (72.09%), Query Frame = 1 Query: 94 NNVDMEEGTLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 N+VD++ EY TV+ VAGPL+++ V+G Y EIV I G R GQVLEV + AVVQVFEGTS ++ + T V+FTGE K +S DMLGRIFNG GKPID GP I+P+ LD++GS +NPS R +P E IQTGISTID MN++ RGQK+P+FS +GLPHNE+A Sbjct: 2 NDVDIK------TREYTTVSEVAGPLMVVQGVEGAAYNEIVEIETPAGENRTGQVLEVKEDIAVVQVFEGTSDLNTESTKVRFTGETAKIGLSTDMLGRIFNGIGKPIDGGPDIIPDQELDVNGSPMNPSAREFPAEFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNELA 167
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THEGJ (V-type ATP synthase beta chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=atpB PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.114e-48 Identity = 93/159 (58.49%), Postives = 115/159 (72.33%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 MEY TV+ + GPL+I++ VKG Y E+V I G R+GQVLE A+VQVFEGT +D K T V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN +A Sbjct: 4 MEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLA 162
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THEON (V-type ATP synthase beta chain OS=Thermococcus onnurineus (strain NA1) GN=atpB PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.679e-48 Identity = 91/159 (57.23%), Postives = 115/159 (72.33%), Query Frame = 1 Query: 133 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 MEY TV+ + GPL+I+ VKG Y E+V I G R+GQVLE + A+VQVFEGT +D K T V+FTGE LK PVS+DMLGR+FNG GKPID GP I+PE D+ G+ +NP R YP + IQTG+S ID MN++ RGQK+P+FS +GLPHN +A Sbjct: 6 MEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEARQDMAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRVFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGVSAIDGMNTLVRGQKLPIFSGSGLPHNMLA 164 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |