DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLOPS (V-type ATP synthase beta chain OS=Clostridium perfringens (strain SM101 / Type A) GN=atpB PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.679e-48 Identity = 92/158 (58.23%), Postives = 122/158 (77.22%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRTVT V GPL+ ++ V+G KY E+V I + G +RRG+VLEV+G+KA+VQ+FEG++GI+ K T V+F G L+ VS DMLGR+F+G G+P DNGP I+PE LDI+G +INP R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH E+A Sbjct: 4 EYRTVTEVVGPLMAVEGVEGVKYDELVEIEMQTGELRRGKVLEVNGDKAMVQLFEGSAGINLKNTKVRFLGRPLEIGVSEDMLGRVFDGMGRPKDNGPNIIPEKRLDINGEAINPVARNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPHKELA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLOPE (V-type ATP synthase beta chain OS=Clostridium perfringens GN=atpB PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.679e-48 Identity = 92/158 (58.23%), Postives = 122/158 (77.22%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRTVT V GPL+ ++ V+G KY E+V I + G +RRG+VLEV+G+KA+VQ+FEG++GI+ K T V+F G L+ VS DMLGR+F+G G+P DNGP I+PE LDI+G +INP R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH E+A Sbjct: 4 EYRTVTEVVGPLMAVEGVEGVKYDELVEIEMQTGELRRGKVLEVNGDKAMVQLFEGSAGINLKNTKVRFLGRPLEIGVSEDMLGRVFDGMGRPKDNGPNIIPEKRLDINGEAINPVARNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPHKELA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLOP1 (V-type ATP synthase beta chain OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpB PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.679e-48 Identity = 92/158 (58.23%), Postives = 122/158 (77.22%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRTVT V GPL+ ++ V+G KY E+V I + G +RRG+VLEV+G+KA+VQ+FEG++GI+ K T V+F G L+ VS DMLGR+F+G G+P DNGP I+PE LDI+G +INP R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH E+A Sbjct: 4 EYRTVTEVVGPLMAVEGVEGVKYDELVEIEMQTGELRRGKVLEVNGDKAMVQLFEGSAGINLKNTKVRFLGRPLEIGVSEDMLGRVFDGMGRPKDNGPNIIPEKRLDINGEAINPVARNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPHKELA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLOBB (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=atpB PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.679e-48 Identity = 92/158 (58.23%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRTVT V GPL++++ V+G KY E+V I L G RRG+VLEV+G KA+VQ+FEG+SGI+ K T +F G L+ VS DMLGR+F+G G+P DNGP I+PE +DI+G +INP R +P E IQTG+S ID +N++ RGQK+P+FSAAGLPH E+A Sbjct: 4 EYRTVTEVVGPLMVVEGVEGVKYDELVEIELHTGEKRRGKVLEVNGSKAMVQIFEGSSGINLKGTKAKFLGRPLELGVSEDMLGRVFDGMGRPNDNGPDIIPEKRVDINGEAINPMARDFPSEFIQTGVSAIDGLNTLVRGQKLPVFSAAGLPHAELA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLOBA (V-type ATP synthase beta chain OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=atpB PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.679e-48 Identity = 92/158 (58.23%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRTVT V GPL++++ V+G KY E+V I L G RRG+VLEV+G KA+VQ+FEG+SGI+ K T +F G L+ VS DMLGR+F+G G+P DNGP I+PE +DI+G +INP R +P E IQTG+S ID +N++ RGQK+P+FSAAGLPH E+A Sbjct: 4 EYRTVTEVVGPLMVVEGVEGVKYDELVEIELHTGEKRRGKVLEVNGSKAMVQIFEGSSGINLKGTKAKFLGRPLELGVSEDMLGRVFDGMGRPNDNGPDIIPEKRVDINGEAINPMARDFPSEFIQTGVSAIDGLNTLVRGQKLPVFSAAGLPHAELA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_FUSNN (V-type ATP synthase beta chain OS=Fusobacterium nucleatum subsp. nucleatum GN=atpB PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 8.724e-48 Identity = 90/158 (56.96%), Postives = 123/158 (77.85%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY++V V GPL+I++ V+G KY E+V I+ G RRG+VLE+DG++A++Q+FEG++GI+ K TTV+F G+ L+ VS DM+GRIF+G G PID GP I+PE +DI+GS INP R YP E IQTGISTID +N++ RGQK+P+FS +GLPHN +A Sbjct: 4 EYKSVQEVVGPLMIVEGVEGIKYEELVEIQTQTGEKRRGRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGPKIIPEKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNVA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METS3 (V-type ATP synthase beta chain OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=atpB PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.139e-47 Identity = 90/158 (56.96%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY T++ V+GPL++++ V+G Y EIV+I +G R GQVLEV + AV+QVFEGT+ ++ K T +FTG+ K VS DM+GR+FNG GKPID GP I+P+ LDI+GS +NP+ R +PEE IQTGISTID MN++ RGQK+P+FS +GLPHNE+A Sbjct: 9 EYTTISEVSGPLMVVEGVEGVGYNEIVDIETPNGEKRSGQVLEVTDDVAVIQVFEGTTDLNTKNTKARFTGQTAKIGVSRDMMGRMFNGIGKPIDGGPEIIPDEELDINGSPMNPASREFPEEFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNELA 166
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_PYRFU (V-type ATP synthase beta chain OS=Pyrococcus furiosus GN=atpB PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.538e-47 Identity = 91/161 (56.52%), Postives = 117/161 (72.67%), Query Frame = 1 Query: 127 VAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 +A EY T++ + GPL+I++ VKG Y E+V I G R+GQVL+ A+VQVFEGT +D K T V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE D+ G+ +NP R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++A Sbjct: 1 MAKEYSTISRIYGPLMIVEGVKGVAYGEVVEIETEWGEKRKGQVLDARENLAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNKLA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_ENTFA (V-type ATP synthase beta chain OS=Enterococcus faecalis GN=atpB PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.315e-47 Identity = 88/158 (55.70%), Postives = 123/158 (77.85%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRT+ V GPL+I++KV G KY E++ +R+ +G +R+GQVLE++G+KA+VQ+FEGTS I+ + + V+F G L+ VS DM+GR+F+G G+ DNGP +LPE LDI+G INP R YP+E IQTGIS ID +N++ RGQK+P+FSA+GLPH E+A Sbjct: 4 EYRTINEVVGPLMIVEKVAGVKYEELIEVRMQNGEIRQGQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPDMMGRVFDGLGRLKDNGPELLPEKKLDINGEVINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGLPHKELA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METAC (V-type ATP synthase beta chain OS=Methanosarcina acetivorans GN=atpB PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.329e-47 Identity = 92/158 (58.23%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+T+T +AGPL+ ++K + Y EIVNI++ DGT+RRGQVL+ + VVQVFEGT G+D K V FTGE LK P S+D+LGRI +GSG P D GP I+P+ LDI+G+++NP R P++ IQTGISTID N++ RGQK+P+FSA+GLPHNEIA Sbjct: 4 EYKTITQIAGPLIFVEKTEPVGYNEIVNIKMTDGTVRRGQVLDSSSDIVVVQVFEGTGGLD-KDCGVIFTGETLKLPASIDLLGRILSGSGDPRDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIA 160 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |