DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THEPX (V-type ATP synthase beta chain OS=Thermoanaerobacter sp. (strain X514) GN=atpB PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 5.654e-47 Identity = 86/158 (54.43%), Postives = 123/158 (77.85%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+TV + GPL++++KV+G KY E+V I G G +RRGQVLEV+G+KA+VQ+FEG++G++ V+F G+ ++ VS+DMLGR+F+G G+P D GP I+PE LDI+G+ INP+ R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH ++A Sbjct: 4 EYKTVREIVGPLMLVEKVEGVKYNELVEIETGSGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSIDMLGRVFDGLGRPRDKGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQKLPIFSGSGLPHAQLA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_THEP3 (V-type ATP synthase beta chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=atpB PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.385e-47 Identity = 86/158 (54.43%), Postives = 123/158 (77.85%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+TV + GPL++++KV+G KY E+V I G G +RRGQVLEV+G+KA+VQ+FEG++G++ V+F G+ ++ VS+DMLGR+F+G G+P D GP I+PE LDI+G+ INP+ R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH ++A Sbjct: 4 EYKTVREIVGPLMLVEKVEGVKYNELVEIETGTGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSIDMLGRVFDGLGRPRDKGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQKLPIFSGSGLPHAQLA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METJA (V-type ATP synthase beta chain OS=Methanocaldococcus jannaschii GN=atpB PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.385e-47 Identity = 93/164 (56.71%), Postives = 118/164 (71.95%), Query Frame = 1 Query: 118 TLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 T A+EY +V +AGPL+I++ V+G Y EIV + DG R GQVLE AVVQVFEGT+G+ K T V+FTG K VS++MLGRIFNG+GKPID GP I+PE LDI+G +NP R P + IQTGISTID MN++ RGQK+P+FS +GLPHN++A Sbjct: 3 TAASAIEYSSVKSIAGPLLIVEGVEGAAYGEIVEVICPDGEKRMGQVLEAREGLAVVQVFEGTTGLSTKDTRVRFTGRTAKIGVSMEMLGRIFNGAGKPIDGGPEIVPEKELDINGYPLNPVSRKVPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQLA 166
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METBA (V-type ATP synthase beta chain OS=Methanosarcina barkeri GN=atpB PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 9.645e-47 Identity = 89/158 (56.33%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+T+T +AGPLV ++K + Y EIV I L DGT RRG+VL+ + V+Q+FEGT+G+D + V FTGE LK P S+D+LGRI +GSG+P+D GP I+P+ LDI+G+++NP R P++ IQTGISTID N++ RGQK+P+FSA+GLPHNEIA Sbjct: 4 EYKTITQIAGPLVFVEKTEPVGYKEIVTINLPDGTTRRGEVLDSSSDIVVIQIFEGTTGLDKECGVV-FTGETLKLPASIDLLGRILSGSGEPLDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIA 160
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_UNCMA (V-type ATP synthase beta chain OS=Uncultured methanogenic archaeon RC-I GN=atpB PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.260e-46 Identity = 90/158 (56.96%), Postives = 122/158 (77.22%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+T++ +AGPL+ + K + Y E+VNI L DGT++RGQVL+ + VQVFEGTSGI ++ ++V+F GE +K PVS DMLGRI +GSG+P+D GP I+PE L+I G++INP R P++ IQTGISTID MN++ RGQK+P+FS +GLPHNEIA Sbjct: 3 EYKTISEIAGPLLFVRKTEPVGYQELVNIVLSDGTVKRGQVLDSSNDVVAVQVFEGTSGI-SRDSSVKFLGETIKMPVSKDMLGRILSGSGEPLDGGPAIIPEKRLEIVGAAINPYSRRQPKDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNEIA 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METMJ (V-type ATP synthase beta chain OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=atpB PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.645e-46 Identity = 91/158 (57.59%), Postives = 120/158 (75.95%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRTV +AGPLV ++K + Y E+VNI DGT++RGQVL+ E VVQVFE T+GI + + ++FTGE +K PV DMLGRI +G GKPID GP I+PE L+I+G++INP R+ PE+ IQTGISTID N++ RGQK+P+FSA+GLPHN++A Sbjct: 3 EYRTVAQIAGPLVFVEKTEPVGYSELVNIVTADGTVKRGQVLDTSDEIVVVQVFETTAGI-GRDSGIRFTGETIKMPVGKDMLGRILSGGGKPIDGGPDIVPEKRLEITGAAINPYARSSPEDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNDVA 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METBF (V-type ATP synthase beta chain OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=atpB PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.645e-46 Identity = 88/158 (55.70%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+T+T +AGPLV ++K + Y EIV I + DGT RRG+VL+ + V+Q+FEGT+G+D + V FTGE LK P S+D+LGRI +GSG+P+D GP I+P+ LDI+G+++NP R P++ IQTGISTID N++ RGQK+P+FSA+GLPHNEIA Sbjct: 4 EYKTITQIAGPLVFVEKTEPVGYKEIVTINMPDGTTRRGEVLDSSSDIVVIQIFEGTTGLDKECGVV-FTGETLKLPASIDLLGRILSGSGEPLDGGPRIVPDQLLDINGAAMNPYARLPPKDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIA 160
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_CLOTH (V-type ATP synthase beta chain OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpB PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.645e-46 Identity = 86/158 (54.43%), Postives = 122/158 (77.22%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRT+T VAGPL+++ KV+G KY E+ I L +G +RR +VLEVDG+ A+VQ+FE ++GI+ + V+F G ++ PVS+DMLGR+F+G GKP+D GP I+P+ LDI+G +NP+ R YP E IQTGIS ID +N++ RGQK+P+FS +GLPH ++A Sbjct: 4 EYRTITEVAGPLMLVQKVEGVKYGELGEIELANGEIRRCKVLEVDGQNALVQLFESSTGINVATSKVRFLGRSIELPVSMDMLGRVFSGMGKPLDGGPNIIPDKRLDINGLPMNPAARNYPSEFIQTGISAIDGLNTLVRGQKLPIFSGSGLPHAQLA 161
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METPE (V-type ATP synthase beta chain OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=atpB PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.149e-46 Identity = 92/158 (58.23%), Postives = 118/158 (74.68%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRT+ +AGPLV ++K + Y E+VNI L DGT++RGQVL+ + VVQVFE T+GI K + V+FTGE +K PV DMLGRI +GSGKPID GP I+PE LDI+G++INP R P + I+TGISTID N++ RGQK+P+FS AGLPHN +A Sbjct: 3 EYRTINKIAGPLVFIEKTEPIGYEELVNIVLYDGTIKRGQVLDTSDDLVVVQVFETTTGI-GKDSGVRFTGETIKMPVGRDMLGRILSGSGKPIDGGPEIVPEKRLDITGAAINPYARASPSDFIETGISTIDGTNTLVRGQKLPIFSGAGLPHNNVA 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METB6 (V-type ATP synthase beta chain OS=Methanoregula boonei (strain 6A8) GN=atpB PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.665e-46 Identity = 90/158 (56.96%), Postives = 118/158 (74.68%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRT+T +AGPLV ++K + Y E+VNI L DGT++RGQVL+ + VVQ+FE T+GI + + V+FTGE +K PV +MLGRI +G GKPID GP I+PE LDI+G++INP R P + IQTGISTID N++ RGQK+P+FS AGLPHN +A Sbjct: 3 EYRTITKIAGPLVFVEKTEPIGYQELVNIVLSDGTIKRGQVLDTSDDLVVVQIFETTTGI-GRDSGVRFTGETIKMPVGREMLGRILSGGGKPIDGGPEIVPEKRLDITGAAINPWARNSPSDFIQTGISTIDGTNTLVRGQKLPIFSGAGLPHNNVA 159 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |