DN617538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB1_METHJ (V-type ATP synthase beta chain 1 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpB1 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 4.787e-46 Identity = 92/158 (58.23%), Postives = 119/158 (75.32%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EYRT+T VAGPLV ++K + Y E+VN+ L DG+ +RGQVL+ + VVQVFE T+GI K T V+FTGE +K PV DMLGRI +G+GKP D GP I+PE L+I+G++INP R P + IQTGISTID+ N++ RGQK+P+FS +GLPHNEIA Sbjct: 3 EYRTITQVAGPLVFVEKTEPVGYQELVNLVLADGSEKRGQVLDTSDDIVVVQVFETTTGI-GKDTGVRFTGETIKMPVGKDMLGRILSGAGKPKDGGPDIVPEKRLEITGAAINPWARGSPRQFIQTGISTIDLTNTLVRGQKLPIFSGSGLPHNEIA 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_ARCFU (V-type ATP synthase beta chain OS=Archaeoglobus fulgidus GN=atpB PE=3 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 6.252e-46 Identity = 91/158 (57.59%), Postives = 117/158 (74.05%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+T+T VAGPLV ++K + Y E+V I L DG+ RRGQVL+ + VVQVFEGT G+D +TV+FTG+++K S DMLGRI +GSG+PID GP I+PE I G++INP R YP E IQTGIS ID MN++ RGQK+P+FS +GLPHN+IA Sbjct: 3 EYKTITQVAGPLVFVEKTEPVAYGELVTITLPDGSTRRGQVLDTSKDVVVVQVFEGTRGVDTS-STVRFTGDIVKLNCSQDMLGRILSGSGEPIDGGPKIVPEERRPIVGAAINPYARQYPREFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNDIA 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METBU (V-type ATP synthase beta chain OS=Methanococcoides burtonii (strain DSM 6242) GN=atpB PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.376e-45 Identity = 88/158 (55.70%), Postives = 119/158 (75.32%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+T+ V+GPL+ L+K + Y E+V I L DGT +RGQVL+ + VVQVFEGT G+ N+ + V F+GE +K PVS DMLGRI +G+G+P+D GP I+P+ +DI+G+S+NP R PE+ IQTGISTID N++ RGQK+P+FS +GLPHNEIA Sbjct: 4 EYKTIVEVSGPLIFLEKTEPVGYGELVQINLPDGTTKRGQVLDTSADMVVVQVFEGTVGL-NEESGVVFSGETIKLPVSKDMLGRILSGAGEPLDGGPRIIPDKRVDINGASMNPYSRMPPEDFIQTGISTIDGTNTLVRGQKLPIFSGSGLPHNEIA 160
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_STAMF (V-type ATP synthase beta chain OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=atpB PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 9.027e-45 Identity = 86/149 (57.72%), Postives = 110/149 (73.83%), Query Frame = 1 Query: 163 GPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 G L+I + +KG Y E+V + LG G R GQV++V + ++QVF G S ID K + V++ GE LK PVS+DMLGRIF+G G+PID GPPI+PE YLDI+GS INP+ R P E I+TGIS ID +NSI RGQK+P+FS +GLPHN IA Sbjct: 19 GSLLIAEPMKGVSYGEVVEVVLGSGETRLGQVIDVSRDATIIQVFGGVSDIDLKISKVRYRGETLKLPVSIDMLGRIFDGLGRPIDGGPPIVPEDYLDINGSPINPASRLPPSEFIETGISAIDGLNSIVRGQKLPIFSGSGLPHNRIA 167
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METM6 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpB PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.011e-44 Identity = 88/163 (53.99%), Postives = 117/163 (71.78%), Query Frame = 1 Query: 121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 ++ +EY +V+ +AGPL+++D ++G Y EIV+I +G R GQVLE E AVVQVFEGTS ++ T V+FTG+ K VS DMLGRIFNG+GKP+D GP I+ E LDI+G +NP R P +QTGISTID N++ RGQKIP+FS +GLPHN++A Sbjct: 4 MQKTIEYTSVSRIAGPLMVIDGIEGVAYGEIVDITTPNGEKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKIPIFSGSGLPHNKLA 166
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METM7 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=atpB PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.627e-44 Identity = 88/163 (53.99%), Postives = 117/163 (71.78%), Query Frame = 1 Query: 121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 ++ +EY +V+ +AGPL+++D ++G Y EIV+I +G R GQVLE E AVVQVFEGTS ++ T V+FTG+ K VS DMLGRIFNG+GKP+D GP I+ E LDI+G +NP R P +QTGISTID N++ RGQKIP+FS +GLPHN++A Sbjct: 4 MQKTIEYTSVSRIAGPLMVIDGIEGIAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKIPIFSGSGLPHNKLA 166
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METMP (V-type ATP synthase beta chain OS=Methanococcus maripaludis GN=atpB PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.430e-44 Identity = 87/163 (53.37%), Postives = 117/163 (71.78%), Query Frame = 1 Query: 121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 ++ +EY +V+ +AGPL+++D ++G Y EIV+I +G R GQVLE E AVVQVFEGTS ++ T V+FTG+ K VS DMLGRIFNG+GKP+D GP I+ E LDI+G +NP R P +QTG+STID N++ RGQKIP+FS +GLPHN++A Sbjct: 4 MQKTIEYTSVSRIAGPLMVIDGIEGIAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPNAFVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLA 166
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_HALMA (V-type ATP synthase beta chain OS=Haloarcula marismortui GN=atpB PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.430e-44 Identity = 85/158 (53.80%), Postives = 115/158 (72.78%), Query Frame = 1 Query: 136 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 EY+T+T ++GPLV ++ + Y +IV I L DG RRGQVLE + +QVFEGT GID +V+F GE +K PV+ D+LGR+ +G+G+PID GP I+P+ DI G +INP R YPEE IQTG+S ID MN++ RGQK+P+FSA+GLPHN++A Sbjct: 3 EYQTITEISGPLVFVETDEPVGYDDIVEIELSDGETRRGQVLESASDYVAIQVFEGTEGIDRD-ASVRFLGETMKMPVTEDLLGRVMDGTGQPIDGGPEIVPDERRDIVGEAINPFSREYPEEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLA 159
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_METM5 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=atpB PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.851e-44 Identity = 87/163 (53.37%), Postives = 117/163 (71.78%), Query Frame = 1 Query: 121 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 ++ +EY +V+ +AGPL+++D ++G Y EIV+I +G R GQVLE E AVVQVFEGTS ++ T V+FTG+ K VS DMLGRIFNG+GKP+D GP I+ E LDI+G +NP R P +QTG+STID N++ RGQKIP+FS +GLPHN++A Sbjct: 4 MQKTIEYTSVSRIAGPLMVIDGIEGIAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSHDMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLA 166
BLAST of DN617538 vs. ExPASy Swiss-Prot
Match: VATB_META3 (V-type ATP synthase beta chain OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=atpB PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.851e-44 Identity = 86/164 (52.44%), Postives = 116/164 (70.73%), Query Frame = 1 Query: 118 TLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIA 609 +LE +EY +V+ +AGPL++++ +KG Y EIV+I G R GQVLE + AVVQVFEGT+ ++ T ++F GE K VS DMLGRIFNG+GKP+D GP I+ E +DI+G +NP R P + +QTGISTID N++ RGQKIP+FS +GLPHN +A Sbjct: 3 SLEKNIEYTSVSSIAGPLIVVEGIKGVAYGEIVSITCPSGEKRTGQVLEAREDVAVVQVFEGTTALNTSETKIRFVGETAKLGVSTDMLGRIFNGAGKPLDGGPDIIAEDKIDINGYPLNPVSRQSPNDFVQTGISTIDGTNTLVRGQKIPIFSGSGLPHNLLA 166 The following BLAST results are available for this feature:
BLAST of DN617538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617538 ID=DN617538; Name=DN617538; organism=Citrus sinensis; type=EST; length=611bpback to top |