DN617535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_RANSY (60S acidic ribosomal protein P0 OS=Rana sylvatica GN=RPLP0 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.160e-31 Identity = 72/146 (49.32%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 160 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N+A L+P ++GNVG +FTK DL A AR G +AP DV VP NTGL P +TSFFQ L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLE--NNSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.434e-31 Identity = 73/146 (50.00%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 160 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 + +A K Y K+ QLL++Y + V ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP DV VP NTGL P +TSFFQ L I TK Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.097e-31 Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 169 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 K+ K Y KL LLE+Y I + + DNV S Q+ IR+ LRG++VVLMGKNTM++R ++ T + L+P ++GNVG +FT GDL APAR G +AP DV +P GNTG++P +TSFFQ L +PTK Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPE--YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAGNTGMEPGKTSFFQALGVPTK 144
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_RAT (60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.065e-30 Identity = 71/146 (48.63%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 160 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.065e-30 Identity = 71/146 (48.63%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 160 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_MOUSE (60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 2.065e-30 Identity = 71/146 (48.63%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 160 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.065e-30 Identity = 71/146 (48.63%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 160 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_CAEEL (60S acidic ribosomal protein P0 OS=Caenorhabditis elegans GN=rpa-0 PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 2.065e-30 Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 154 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 +V+ ++ K Y KL +L EEY + L+ DNVGS Q+Q IR+ +RG + +LMGKNTM+++ +R H K N + L+P + NVG +FTK DL GAPA+ G +AP DV +PP NTG+ P +TSFFQ L IPTK Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGK--NPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTK 146
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 2.065e-30 Identity = 71/146 (48.63%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 160 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of DN617535 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.522e-30 Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = 1 Query: 169 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTK 597 K+ K Y KL LLEEY I + + DNV S Q+ IR+ LR VVLMGKNTM++R ++ + + L+P ++GNVG +FT GDL APAR G VAP+DV +P GNTG++P +TSFFQ L +PTK Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFL--VDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAGNTGMEPGKTSFFQALGVPTK 144 The following BLAST results are available for this feature:
BLAST of DN617535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617535 ID=DN617535; Name=DN617535; organism=Citrus sinensis; type=EST; length=599bpback to top |