DN617528

Overview
NameDN617528
Unique NameDN617528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length416
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA7 (Chaperone protein htpG OS=Pseudomonas aeruginosa (strain PA7) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.358e-27
Identity = 59/113 (52.21%), Postives = 86/113 (76.11%), Query Frame = 3
Query:   60 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RFE+L +   L+   EL I +  DK  NT+++ D+GIGM++ D+V +LGTIA+SGT +F++ L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEALANPELLEGGAELKIRVSFDKEANTVTLEDNGIGMSREDVVTHLGTIAKSGTADFLKNLS 113          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_BURTA (Chaperone protein htpG OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.358e-27
Identity = 59/106 (55.66%), Postives = 81/106 (76.42%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   TL+I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTLTIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_BURS3 (Chaperone protein htpG OS=Burkholderia sp. (strain 383) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.358e-27
Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE L D +  +  P + I I  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYEDDPNVRIRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLS 109          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.358e-27
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 3
Query:   72 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 395
            S +ET  FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++     LD   EL I +  DK   T++I D+GIG+++ + V NLGTIARSGT+EF   L
Sbjct:    8 SASETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYDKAARTITISDNGIGLSRDEAVANLGTIARSGTREFFSQL 115          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.358e-27
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 3
Query:   72 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 395
            S +ET  FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++     LD   EL I +  DK   T++I D+GIG+++ + V NLGTIARSGT+EF   L
Sbjct:    8 SASETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYDKAARTITISDNGIGLSRDEAVANLGTIARSGTREFFSQL 115          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.358e-27
Identity = 57/113 (50.44%), Postives = 84/113 (74.34%), Query Frame = 3
Query:   60 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            ++ +   ET  FQ E+ QLLSL+ ++ YSNKE+FLRELISN+SDA DK+RF++L+D S  +   +L + ++ DK N TL+I D+GIGMT+  ++ +LGTIA+SGT EF + L+
Sbjct:    1 MTQSVHAETHGFQTEVKQLLSLMAHSLYSNKEVFLRELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLS 113          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.358e-27
Identity = 57/113 (50.44%), Postives = 84/113 (74.34%), Query Frame = 3
Query:   60 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            ++ +   ET  FQ E+ QLLSL+ ++ YSNKE+FLRELISN+SDA DK+RF++L+D S  +   +L + ++ DK N TL+I D+GIGMT+  ++ +LGTIA+SGT EF + L+
Sbjct:    1 MTQSVHAETHGFQTEVKQLLSLMAHSLYSNKEVFLRELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLS 113          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_RALSO (Chaperone protein htpG OS=Ralstonia solanacearum GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.691e-27
Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 3
Query:   66 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            M +  E  AFQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA+DK+RFE + D S L+   EL I I  D    T++I D+GIGM++ + + NLGTIARSGT+EF   L+
Sbjct:    1 MGAPHEKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEGGGELGIRIGFDAQARTVTIADNGIGMSRDEAIRNLGTIARSGTREFFSQLS 111          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_MARMS (Chaperone protein htpG OS=Marinomonas sp. (strain MWYL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.691e-27
Identity = 61/113 (53.98%), Postives = 83/113 (73.45%), Query Frame = 3
Query:   66 MASET--ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            MA++T  ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFES+ +   L   P L + I  DK  NT+ I D+G+GM++ + + NLGTIA+SGT  F+E L+
Sbjct:    1 MATDTQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFESVANADLLAEDPNLRVRIEFDKDTNTVVIDDNGVGMSREEAITNLGTIAKSGTSAFLEQLS 113          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_IDILO (Chaperone protein htpG OS=Idiomarina loihiensis GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.691e-27
Identity = 57/110 (51.82%), Postives = 81/110 (73.64%), Query Frame = 3
Query:   69 ASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            A + E   FQ E+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RF++L+D S      +L + +  DK + T++I D+G+GMT+ D++NNLGTIA+SGT EF   L+
Sbjct:    4 AGQMEKHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFKALSDNSLYGDDSDLHVRVSVDKDSRTITISDNGVGMTRDDVMNNLGTIAKSGTAEFFGQLS 113          
The following BLAST results are available for this feature:
BLAST of DN617528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_PSEA74.358e-2752.21Chaperone protein htpG OS=Pseudomonas aeruginosa (... [more]
HTPG_BURTA4.358e-2755.66Chaperone protein htpG OS=Burkholderia thailandens... [more]
HTPG_BURS34.358e-2756.60Chaperone protein htpG OS=Burkholderia sp. (strain... [more]
HTPG_BORPA4.358e-2755.56Chaperone protein htpG OS=Bordetella parapertussis... [more]
HTPG_BORBR4.358e-2755.56Chaperone protein htpG OS=Bordetella bronchiseptic... [more]
HTPG_AERS44.358e-2750.44Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_AERHH4.358e-2750.44Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_RALSO5.691e-2754.95Chaperone protein htpG OS=Ralstonia solanacearum G... [more]
HTPG_MARMS5.691e-2753.98Chaperone protein htpG OS=Marinomonas sp. (strain ... [more]
HTPG_IDILO5.691e-2751.82Chaperone protein htpG OS=Idiomarina loihiensis GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617528 ID=DN617528; Name=DN617528; organism=Citrus sinensis; type=EST; length=416bp
CTTCCAAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGAA
CGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGC
TGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAACA
AGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGAT
AAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACC
AGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTA
TTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTT
GGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGC
TGGGGCGGATGTGAGC
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