DN617528

Overview
NameDN617528
Unique NameDN617528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length416
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_PSE14 (Chaperone protein htpG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.708e-27
Identity = 58/113 (51.33%), Postives = 86/113 (76.11%), Query Frame = 3
Query:   60 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   T+++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.268e-26
Identity = 57/107 (53.27%), Postives = 82/107 (76.64%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 401
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF SL++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRSLSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.268e-26
Identity = 57/113 (50.44%), Postives = 82/113 (72.57%), Query Frame = 3
Query:   72 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 410
            S+ ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LTD +  +   EL + +  DK   T++I D+GIGMT+  ++ +LGTIA+SGTKEF   L+  A+
Sbjct:    2 SQQETHGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTDDALYEGDGELRVRVSTDKEKGTVTISDNGIGMTRDSVIEHLGTIAKSGTKEFFNNLSGEAN 114          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_ROSDO (Chaperone protein htpG OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.268e-26
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = 3
Query:   69 ASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 395
            AS  ETF+FQ E+ QLL ++  + YSN+EIFLREL+SN+SDA DK+R+E+LT+ S      E  I +  DK   TLS+ D+GIGM   DL++ LGTIARSGT  F++AL
Sbjct:    4 ASVKETFSFQTEVGQLLDIVAGSLYSNREIFLRELVSNASDACDKLRYEALTNPSLAQNADEFAISLAVDKKAKTLSVSDNGIGMNHGDLLDTLGTIARSGTGAFLDAL 112          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_PSESM (Chaperone protein htpG OS=Pseudomonas syringae pv. tomato GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.268e-26
Identity = 58/113 (51.33%), Postives = 86/113 (76.11%), Query Frame = 3
Query:   60 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   T+++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSRPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_PSEF5 (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.268e-26
Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 3
Query:   60 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 395
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   T+++ D+GIGM++ D++ +LGTIA+SGT +FM+ L
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNL 112          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.268e-26
Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 3
Query:   72 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 410
            S+ ET  FQ EI QLL ++IN+ Y+++EIFLRELISN++DA +K+R+  L+ ++  D +  L I I PD+   TL+I D+GIGMTK DL+ N+GTIA SG+K F++ LA   D
Sbjct:    2 SQIETKEFQTEIRQLLDIVINSLYTDREIFLRELISNAADASEKVRYMQLSGQNVKDQELPLEIRITPDENAKTLTIADAGIGMTKEDLIENIGTIAHSGSKAFVQRLAEAGD 114          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_BURXL (Chaperone protein htpG OS=Burkholderia xenovorans (strain LB400) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.268e-26
Identity = 59/106 (55.66%), Postives = 80/106 (75.47%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            ET +FQAE+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RFE++ + +  +  P L I +  DK   T++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEAIENSALYENDPNLRIRVSYDKDARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFGKLS 109          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.268e-26
Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = 3
Query:   99 AEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 395
            AE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD+  L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:    1 AEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDEQALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 99          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_PSEFS (Chaperone protein htpG OS=Pseudomonas fluorescens (strain SBW25) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.656e-26
Identity = 58/113 (51.33%), Postives = 85/113 (75.22%), Query Frame = 3
Query:   60 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   T+++ D+GIGM++ D + +LGTIA+SGT +FM+ L+
Sbjct:    3 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDAITHLGTIAKSGTADFMKNLS 115          
The following BLAST results are available for this feature:
BLAST of DN617528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_PSE149.708e-2751.33Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_SHIDS1.268e-2653.27Chaperone protein htpG OS=Shigella dysenteriae ser... [more]
HTPG_SHEDO1.268e-2650.44Chaperone protein htpG OS=Shewanella denitrificans... [more]
HTPG_ROSDO1.268e-2654.13Chaperone protein htpG OS=Roseobacter denitrifican... [more]
HTPG_PSESM1.268e-2651.33Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSEF51.268e-2651.79Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_DESHY1.268e-2651.33Chaperone protein htpG OS=Desulfitobacterium hafni... [more]
HTPG_BURXL1.268e-2655.66Chaperone protein htpG OS=Burkholderia xenovorans ... [more]
ENPL_RABIT1.268e-2658.59Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
HTPG_PSEFS1.656e-2651.33Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617528 ID=DN617528; Name=DN617528; organism=Citrus sinensis; type=EST; length=416bp
CTTCCAAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGAA
CGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGC
TGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAACA
AGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGAT
AAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACC
AGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTA
TTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTT
GGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGC
TGGGGCGGATGTGAGC
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