DN617528

Overview
NameDN617528
Unique NameDN617528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length416
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_WOLPM (Chaperone protein htpG OS=Wolbachia pipientis wMel GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.163e-26
Identity = 58/114 (50.88%), Postives = 83/114 (72.81%), Query Frame = 3
Query:   75 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 416
            ETE   F AE+ ++L+++I++ Y+NK+IFLRELISN+SDA DK+R+ES  + + LD   EL I I  +K  N L I D+GIGM + DL++NLGTIA SGT++F++A+    D S
Sbjct:   10 ETENLKFDAEVGKVLNIVIHSLYTNKDIFLRELISNASDACDKLRYESQLNPNLLDLSDELKITISSNKDKNELYITDNGIGMNRQDLIDNLGTIASSGTQKFLDAIKNSKDSS 123          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_ENT38 (Chaperone protein htpG OS=Enterobacter sp. (strain 638) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.163e-26
Identity = 56/107 (52.34%), Postives = 82/107 (76.64%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 401
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK N TL+I D+GIGM + +++++LGTIA+SGTK F+E++ +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDNRTLTIADNGIGMNRDEVIDHLGTIAKSGTKSFLESMGS 111          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_WIGBR (Chaperone protein htpG OS=Wigglesworthia glossinidia brevipalpis GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.825e-26
Identity = 58/105 (55.24%), Postives = 83/105 (79.05%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 395
            ET  FQ+E+ QLL+L+I++ YSNKEIFLRELISN+SDALDK+RF S++D+     Q +L I I  DK   +++I D+GIGM+K +++ NLGTIA+SGTK F++++
Sbjct:    5 ETLEFQSEVKQLLNLMIHSLYSNKEIFLRELISNASDALDKLRFLSISDEKIKIKQNKLCIFIDYDKNKKSITIQDNGIGMSKKEVIENLGTIAKSGTKSFIKSI 109          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCM (Chaperone protein htpG OS=Vibrio cholerae serotype O1 (strain M66-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.825e-26
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RF++L+         EL + +  DK  NTL+I D+GIGMT+ +++ NLGTIA+SGT EF   L+
Sbjct:   10 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLS 115          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCH (Chaperone protein htpG OS=Vibrio cholerae GN=htpG PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.825e-26
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RF++L+         EL + +  DK  NTL+I D+GIGMT+ +++ NLGTIA+SGT EF   L+
Sbjct:   10 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLS 115          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_VIBC3 (Chaperone protein htpG OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.825e-26
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 398
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RF++L+         EL + +  DK  NTL+I D+GIGMT+ +++ NLGTIA+SGT EF   L+
Sbjct:   10 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLS 115          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_SHISS (Chaperone protein htpG OS=Shigella sonnei (strain Ss046) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.825e-26
Identity = 56/107 (52.34%), Postives = 82/107 (76.64%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 401
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.825e-26
Identity = 56/107 (52.34%), Postives = 82/107 (76.64%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 401
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_SHIBS (Chaperone protein htpG OS=Shigella boydii serotype 4 (strain Sb227) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.825e-26
Identity = 56/107 (52.34%), Postives = 82/107 (76.64%), Query Frame = 3
Query:   81 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 401
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617528 vs. ExPASy Swiss-Prot
Match: HTPG_PASMU (Chaperone protein htpG OS=Pasteurella multocida GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.825e-26
Identity = 58/110 (52.73%), Postives = 84/110 (76.36%), Query Frame = 3
Query:   66 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 395
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L+     +   +L + I  D+   TL+I D+GIGMT+ +++++LGTIA+SGTKEF+ AL
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSVPELYEGDGDLKVRIRFDEEKGTLTISDNGIGMTRDEVIDHLGTIAKSGTKEFLSAL 110          
The following BLAST results are available for this feature:
BLAST of DN617528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_WOLPM2.163e-2650.88Chaperone protein htpG OS=Wolbachia pipientis wMel... [more]
HTPG_ENT382.163e-2652.34Chaperone protein htpG OS=Enterobacter sp. (strain... [more]
HTPG_WIGBR2.825e-2655.24Chaperone protein htpG OS=Wigglesworthia glossinid... [more]
HTPG_VIBCM2.825e-2654.72Chaperone protein htpG OS=Vibrio cholerae serotype... [more]
HTPG_VIBCH2.825e-2654.72Chaperone protein htpG OS=Vibrio cholerae GN=htpG ... [more]
HTPG_VIBC32.825e-2654.72Chaperone protein htpG OS=Vibrio cholerae serotype... [more]
HTPG_SHISS2.825e-2652.34Chaperone protein htpG OS=Shigella sonnei (strain ... [more]
HTPG_SHIFL2.825e-2652.34Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_SHIBS2.825e-2652.34Chaperone protein htpG OS=Shigella boydii serotype... [more]
HTPG_PASMU2.825e-2652.73Chaperone protein htpG OS=Pasteurella multocida GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617528 ID=DN617528; Name=DN617528; organism=Citrus sinensis; type=EST; length=416bp
CTTCCAAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGAA
CGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGC
TGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAACA
AGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGAT
AAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACC
AGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTA
TTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTT
GGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGC
TGGGGCGGATGTGAGC
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