DN617524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB5_ARATH (Tubulin beta-5 chain OS=Arabidopsis thaliana GN=TUBB5 PE=2 SV=1) HSP 1 Score: 429.098 bits (1102), Expect = 1.238e-119 Identity = 207/230 (90.00%), Postives = 214/230 (93.04%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS-DLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILHIQGGQCGNQIG+KFWEVICDEHGID TG+YSGD+ DLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+FGDLNHLI Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLI 230
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB1_ARATH (Tubulin beta-1 chain OS=Arabidopsis thaliana GN=TUBB1 PE=2 SV=1) HSP 1 Score: 426.787 bits (1096), Expect = 6.144e-119 Identity = 204/230 (88.70%), Postives = 214/230 (93.04%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS-DLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILH+QGGQCGNQIG+KFWEVICDEHG+D TG+Y+GDS DLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+FGDLNHLI Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLI 230
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB4_ARATH (Tubulin beta-4 chain OS=Arabidopsis thaliana GN=TUBB4 PE=2 SV=2) HSP 1 Score: 426.017 bits (1094), Expect = 1.048e-118 Identity = 205/229 (89.52%), Postives = 211/229 (92.14%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG+Y GDS LQLERI+VY+NEASGG+YVPRAVLMDLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN DCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA PTFGDLNHLI Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLI 229
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB6_MAIZE (Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1) HSP 1 Score: 425.631 bits (1093), Expect = 1.369e-118 Identity = 203/229 (88.65%), Postives = 212/229 (92.58%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILHIQGGQCGNQIGAKFWEV+CDEHGID TG+Y+G+SDLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLI Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB4_ORYSJ (Tubulin beta-4 chain OS=Oryza sativa subsp. japonica GN=TUBB4 PE=2 SV=1) HSP 1 Score: 425.631 bits (1093), Expect = 1.369e-118 Identity = 203/229 (88.65%), Postives = 212/229 (92.58%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILHIQGGQCGNQIGAKFWEV+CDEHGID TG+Y+G+SDLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLI Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB_HORVU (Tubulin beta chain OS=Hordeum vulgare GN=TUBB PE=2 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 2.335e-118 Identity = 203/229 (88.65%), Postives = 211/229 (92.14%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILHIQGGQCGNQIGAKFWEV+CDEHGID TG+Y+G SDLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLI Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB2_WHEAT (Tubulin beta-2 chain OS=Triticum aestivum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 2.335e-118 Identity = 203/229 (88.65%), Postives = 211/229 (92.14%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILHIQGGQCGNQIGAKFWEV+CDEHGID TG+Y+G SDLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLI Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB2_ELEIN (Tubulin beta-2 chain OS=Eleusine indica GN=TUBB2 PE=2 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 2.335e-118 Identity = 203/229 (88.65%), Postives = 211/229 (92.14%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILHIQGGQCGNQIGAKFWEV+CDEHGID TG+Y+G SDLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLI Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB9_ARATH (Tubulin beta-9 chain OS=Arabidopsis thaliana GN=TUBB9 PE=2 SV=1) HSP 1 Score: 424.476 bits (1090), Expect = 3.049e-118 Identity = 204/229 (89.08%), Postives = 210/229 (91.70%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILHIQGGQCGNQIGAKFWEVIC EHGID TG+ GD+DLQLERINVY+NEASGG+YVPRAVLMDLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA PTFGDLNHLI Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLI 229
BLAST of DN617524 vs. ExPASy Swiss-Prot
Match: TBB6_ORYSJ (Tubulin beta-6 chain OS=Oryza sativa subsp. japonica GN=TUBB6 PE=2 SV=1) HSP 1 Score: 423.705 bits (1088), Expect = 5.201e-118 Identity = 202/229 (88.21%), Postives = 211/229 (92.14%), Query Frame = 3 Query: 63 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 749 MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG+Y+G SDLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLI Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229 The following BLAST results are available for this feature:
BLAST of DN617524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617524 ID=DN617524; Name=DN617524; organism=Citrus sinensis; type=EST; length=751bpback to top |