DN617523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA_EUPVA (Tubulin alpha chain OS=Euplotes vannus PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = -1 Query: 251 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPN---NVKSSVCDIPPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAD 619 +Y+ MFRG + K+V+ + ++ K + FV+W P + + P G + A I NST+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ TA+ Sbjct: 311 KYMACCMMFRGDVVPKDVNAAVATIKTKRTIQFVDWSPGFKVGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETAE 440
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBAD_PHYPO (Tubulin alpha-1A chain OS=Physarum polycephalum GN=ALTA PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 39/124 (31.45%), Postives = 70/124 (56.45%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMACCLMYRGDVVPKDVNASVAVIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 41/131 (31.30%), Postives = 71/131 (54.20%), Query Frame = -1 Query: 251 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGL--------KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAD 619 +Y+ ++RG + K+V+ + ++ K S FV+W P K + PP + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++ +AD Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVSRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGVDSAD 441
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 40/131 (30.53%), Postives = 71/131 (54.20%), Query Frame = -1 Query: 251 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAD 619 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I E R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ TA+ Sbjct: 311 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAE 441
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA_XENLA (Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16 Identity = 41/131 (31.30%), Postives = 72/131 (54.96%), Query Frame = -1 Query: 251 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAD 619 +Y+ ++RG + K+V+ + ++ K S FV+W P K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ +AD Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSAD 441
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBAN_PHYPO (Tubulin alpha-1B chain OS=Physarum polycephalum GN=ALTBN PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16 Identity = 42/132 (31.82%), Postives = 72/132 (54.55%), Query Frame = -1 Query: 248 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC----DIPPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 619 +Y+ M+RG + K+V + ++ K + FV+W P K + + P G ++ A I N+T+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ T D Sbjct: 311 KYMACCLMYRGDVVPKDVTAAVAVIKTKRTIQFVDWCPTGFKCGINYQAPSVVPGGDLAKVQRALCMISNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETVGD 442
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.021e-16 Identity = 37/131 (28.24%), Postives = 73/131 (55.73%), Query Frame = -1 Query: 251 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGL--------KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAD 619 +Y+ + ++RG + K+ + + ++ K + FV+W P K +C+ PP + K + + N+T+I + R+ +F ++ ++AF+HWY GEGM+E EF+EA ++ L +Y++ +AD Sbjct: 310 KYMACALLYRGDVVPKDTNAAVALIKTKRTIQFVDWCPTGFKLGICNEPPAHVPGGDLAKVKRSMCMLSNTTAISSAWSRLDHKFDLLYSKRAFVHWYVGEGMEEGEFSEARQDLAALEKDYEEVGMDSAD 440
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16 Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ ++RG + K+V+ + ++ K S FV+W P K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFVLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA_TORMA (Tubulin alpha chain OS=Torpedo marmorata PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.959e-16 Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ ++RG + K+V+ + ++ K S FV+W P K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA_NOTVI (Tubulin alpha chain OS=Notophthalmus viridescens PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.959e-16 Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGL--------KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ ++RG + K+V+ + ++ K S FV+W P K + PP + + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434 The following BLAST results are available for this feature:
BLAST of DN617523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617523 ID=DN617523; Name=DN617523; organism=Citrus sinensis; type=EST; length=619bpback to top |