DN617523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.882e-14 Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK---GLKMAST-----FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ ++RG + KEV+ + ++++S FV+W P K + + PP G +A + N+T+I E + R+ +F M+ ++AFLHWY EGM+E EF EA ++ L +Y++ Sbjct: 318 KYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLEAREDLAALERDYEE 441
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.916e-14 Identity = 36/124 (29.03%), Postives = 66/124 (53.23%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGL--------KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ ++ G + + + +++ K + FV+W P K +C PP + A + N+T+I E + +S +F M+ ++AF+HWY GEGM+E EF+EA + L A+Y++ Sbjct: 311 KYMATCLLYGGDVVPNDAHAAVASLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREVLAALEADYEE 434
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.916e-14 Identity = 40/131 (30.53%), Postives = 70/131 (53.44%), Query Frame = -1 Query: 251 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV---CDIPPKGLKMAST-----FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAD 619 +Y+ ++RG + K+V+ + +V+ K FV+W P K + I +G +A + N+T+I E + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y + TAD Sbjct: 314 KYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTAD 444
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.420e-14 Identity = 38/124 (30.65%), Postives = 68/124 (54.84%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ ++RG + K+V+E + ++++ S FV+W P K + PP ++ A + N+T+I E + R+ +F M+ +KAFLHWY EGM+ EF EA ++ L +Y++ Sbjct: 318 KYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEKDYEE 441
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA4_DROME (Tubulin alpha-4 chain OS=Drosophila melanogaster GN=alphaTub67C PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.420e-14 Identity = 38/124 (30.65%), Postives = 68/124 (54.84%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV-----CDIPPKGLKMAST---FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +++ ++RG + K+V+ + +++K FV+W P K + +P L S + N+T+I F +S +F MF+++AF+HWY GEGM+E EFTEA N+ L ++++ Sbjct: 322 KFMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEE 445
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 6.420e-14 Identity = 39/140 (27.86%), Postives = 71/140 (50.71%), Query Frame = -1 Query: 251 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAS-------------TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ----YQDATAD 619 +Y+ + ++RG + ++ + ++ K+S VEW P K + P + AS + + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Y D D Sbjct: 312 KYMAVALLYRGDVVPRDTSAAVAALKAKSSFNLVEWCPTGFKIGINHQKPMSVPTASPADGGLASVDRSVSMLSNTTAIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLASLEKDYEEVAGDYNDVDVD 451
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBAA_PNECA (Tubulin alpha chain (Fragment) OS=Pneumocystis carinii GN=TUB-A PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.385e-14 Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = -1 Query: 329 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLK--------MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE 619 +Y+ ++RG + TK+V+ + V+ K + FV+W P K VC PP+ + A + N+TSI E + R+ +F M+ ++AF+HWY GEGM+E Sbjct: 108 KYMATCLLYRGDVVTKDVNAAVAAVRTKRTIQFVDWCPTGFKLGVCYQPPQHVPHGDLAKVDRAVCMLSNTTSIAEAWPRLDHKFDLMYSKRAFVHWYVGEGMEE 212
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.868e-13 Identity = 36/124 (29.03%), Postives = 65/124 (52.42%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ ++RG + K+V+ + ++ S FV+W P K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY EGM+E EF EA ++ L +Y + Sbjct: 308 KYMACCMLYRGDVVPKDVNVAIAAIKTNRSLQFVDWCPTGFKVGINYQPPIPTPGGDLAQVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVSEGMEEGEFAEAREDLAALEKDYDE 431
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13 Identity = 35/124 (28.23%), Postives = 65/124 (52.42%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGL--------KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ ++RG + + + ++ K + FV+W P K +C P+ + A + N+T+I E + +S +F M ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQAPENVPNGDLAKVSRAVCMLSNTTAIAEAWSSLSLKFDLMHSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEE 434
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13 Identity = 36/124 (29.03%), Postives = 67/124 (54.03%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L + ++ Sbjct: 311 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSEAREDLAALEKDCEE 434 The following BLAST results are available for this feature:
BLAST of DN617523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617523 ID=DN617523; Name=DN617523; organism=Citrus sinensis; type=EST; length=619bpback to top |