DN617523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA6_NAEGR (Tubulin alpha-6 chain OS=Naegleria gruberi GN=TUBA6 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.435e-13 Identity = 37/124 (29.84%), Postives = 70/124 (56.45%), Query Frame = -1 Query: 272 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGL--------KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 619 +Y+ + M+RG + KEV + + NV++K + FV+W P K V P L + + I N+T+I ++F R++++F ++ ++A++H + EGM+E EF EA ++ L +Y + Sbjct: 309 KYIASCLMYRGDVVNKEVTDAVKNVKSKANIQFVDWSPCAFKIGVNSQKPTVLPDSEFAQVERSCAMISNNTAISQVFERMNDKFDLLYAKRAYVHHFVSEGMEEGEFAEAREDLAALEKDYTE 432
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13 Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = -1 Query: 257 YLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVAEYQQYQDAT 616 YL + M RG + ++ + + K S FV W K+S+C +PP G + + N+T ++ F + E+F ++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT Sbjct: 343 YLACALMVRGNVQISDLRRNIERL--KPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13 Identity = 37/131 (28.24%), Postives = 71/131 (54.20%), Query Frame = -1 Query: 251 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK---GLKMAS-----TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAD 619 +Y+ + ++RG ++ + + +++ K S VEW P K + P G ++A + + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + D Sbjct: 313 KYMAVALLYRGDCVPRDCTQAIASLKAKASFNLVEWCPTGFKVGINYQKPARVPGSELAPVDRSVSMLSNTTAISEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVAGDSLD 443
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.065e-12 Identity = 37/112 (33.04%), Postives = 62/112 (55.36%), Query Frame = -1 Query: 323 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSY--FVEWIPNNVKSSVCDIPP------KGLKMAST-----FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 619 +Y+ M+RG + KE + + N++N+ S FV+W P K + + P G MA T + N+T+I ++F R++ +F M+ ++AF+HWY GEGM+E E Sbjct: 220 KYMACCLMYRGNIVPKEAQKAVQNIRNEKSKTVSFVDWSPTGFKCGINNSKPTTVLGENGDNMARTEKSVCMLSNTTAISQVFSRINHKFDLMYIKRAFVHWYVGEGMEEGE 331
BLAST of DN617523 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12 Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = -1 Query: 257 YLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVAEYQQYQDAT 616 YL + + RG + ++ + + K + FV W K+S+C +PP G + + N+T ++ F + E+FT ++++KA LH Y +GM+E FTEA S+++ L+ EY DAT Sbjct: 343 YLACALIVRGNVQISDLRRNIERL--KPALQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELRERFTRLYKKKAHLHHYLQVDGMEESTFTEAVSSLSALIQEYSDL-DAT 460 The following BLAST results are available for this feature:
BLAST of DN617523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617523 ID=DN617523; Name=DN617523; organism=Citrus sinensis; type=EST; length=619bpback to top |