DN617521

Overview
NameDN617521
Unique NameDN617521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2838 contig Csv1_Contig2838:47..660. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617521 vs. ExPASy Swiss-Prot
Match: MPCP_YEAST (Mitochondrial phosphate carrier protein OS=Saccharomyces cerevisiae GN=MIR1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11
Identity = 40/120 (33.33%), Postives = 61/120 (50.83%), Query Frame = 2 
Query:  257 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKY-KSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIY 613
            V AAP+ P     YS + Y    + G + CG TH+++ P+D+VK  +Q++P  Y K +   F  ++  +G      G+ PTLLGYS QGA              D  G + A++YK  +Y
Sbjct:    3 VSAAPAIP----QYSVSDYMKFALAGAIGCGSTHSSMVPIDVVKTRIQLEPTVYNKGMVGSFKQIIAGEGAGALLTGFGPTLLGYSIQGAFKFGGYEVFKKFFIDNLGYDTASRYKNSVY 118
The following BLAST results are available for this feature:
BLAST of DN617521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MPCP_YEAST1.003e-1133.33Mitochondrial phosphate carrier protein OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F04_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617521 ID=DN617521; Name=DN617521; organism=Citrus sinensis; type=EST; length=614bp
AGGAGAAGAGAAAGAGAAAATTAGAAGAATTCTCTCTGTCTCGCTCTTTT
TCTCTATAATTCAATCAAGCTTTTTACTCTCAAAATCAAATTTCAAAAAT
TCCGAAATGGCCCTCACAGAATCTTATAGGAAAAACTCTCTGATACCAAG
CTACCTCTACTCCTCCCAAACATCCTTCCCGTCCACGGCGGCTTTCAATG
GAGCGGCAGCAGCCGCCACGTCGCCGGCTACTCCATCCACGGCGAGGAGG
AGCTTCGTTGTTGCGGCACCGAGCGAGCCAGGGAAGATAGAGATGTACTC
CCCTGCATTCTACGCCGCTTGTACCGTCGGCGGGATCCTCAGCTGCGGTC
TCACTCACACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAATATGCAG
ATTGATCCTGTTAAGTATAAAAGCATATCATCTGGTTTTGGAGTTTTGCT
CAAGGAACAGGGAATCAGGGGCTTCTTCAGGGGATGGGTACCTACCTTGC
TTGGTTACAGCGCCCAAGGTGCTTGCAAGTTTGGATTCTACGAGTTCTTC
AAGAAGTACTACTCTGACATTGCTGGTCCAGAGTATGCTGCTAAGTACAA
GACTTTAATCTACC
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