DN617516

Overview
NameDN617516
Unique NameDN617516
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length444
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL2_CERAE (Protein yippee-like 2 OS=Cercopithecus aethiops GN=YPEL2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKY
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKY 100          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL2_BOVIN (Protein yippee-like 2 OS=Bos taurus GN=YPEL2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKY
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKY 100          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL1_MOUSE (Protein yippee-like 1 OS=Mus musculus GN=Ypel1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKY
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKY 100          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL1_HUMAN (Protein yippee-like 1 OS=Homo sapiens GN=YPEL1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKY
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKY 100          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL1_COTJA (Protein yippee-like 1 OS=Coturnix coturnix japonica GN=YPEL1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKY
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKY 100          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL1_CERAE (Protein yippee-like 1 OS=Cercopithecus aethiops GN=YPEL1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF    G+AYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKY
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKY 100          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPL1_CAEEL (Protein yippee-like F37A8.5 OS=Caenorhabditis elegans GN=F37A8.5 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.421e-21
Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR +LA   +++SKSF    GKAYLF+ VVNV  G  EER+++TG+H VADI+C  C + +GWKYE A E SQKY
Sbjct:   32 RCYSCIHCRANLAAHAELISKSFQGSQGKAYLFNAVVNVGCGPAEERVLLTGLHAVADIYCEICKTTLGWKYEHAFESSQKY 113          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YIPL_ORYSJ (Putative yippee-like protein Os10g0369500 OS=Oryza sativa subsp. japonica GN=Os10g0369500 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.330e-19
Identity = 39/81 (48.15%), Postives = 57/81 (70.37%), Query Frame = 2
Query:  200 IYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            +  C+ CR   A  + ++S+ F  R G+AYLF  VVN+S+G  E+R +MTG+HTV DI+C  C  I+GW+YE A+E+S+KY
Sbjct:   22 VLKCRRCRVDAASADAILSRDFRGRFGRAYLFDHVVNISLGPNEDRYLMTGLHTVKDIYCSCCQQILGWRYEKAYEESEKY 102          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YIPP_DROME (Protein yippee OS=Drosophila melanogaster GN=Yippee PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.509e-18
Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  164 MGRLFVVNLEG-KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR+F+ +L G K+++C  C T+L     ++S  F    G+AYLF +VVN++    +ER+M+TG H V D+ C  CG+ +GW YE A E+SQKY
Sbjct:    1 MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKY 94          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL5_PONAB (Protein yippee-like 5 OS=Pongo abelii GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.798e-16
Identity = 40/94 (42.55%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  164 MGRLFVVNLEG-KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR+F+ ++ G +++SC +C T L    +++S  F    G+A+LF+KVVN+   E ++R+M+TG H V D+ C  C S +GW YE A E SQ+Y
Sbjct:    1 MGRIFLDHIGGTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRY 94          
The following BLAST results are available for this feature:
BLAST of DN617516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
YPEL2_CERAE9.843e-2356.10Protein yippee-like 2 OS=Cercopithecus aethiops GN... [more]
YPEL2_BOVIN9.843e-2356.10Protein yippee-like 2 OS=Bos taurus GN=YPEL2 PE=3 ... [more]
YPEL1_MOUSE9.843e-2356.10Protein yippee-like 1 OS=Mus musculus GN=Ypel1 PE=... [more]
YPEL1_HUMAN9.843e-2356.10Protein yippee-like 1 OS=Homo sapiens GN=YPEL1 PE=... [more]
YPEL1_COTJA9.843e-2356.10Protein yippee-like 1 OS=Coturnix coturnix japonic... [more]
YPEL1_CERAE9.843e-2356.10Protein yippee-like 1 OS=Cercopithecus aethiops GN... [more]
YPL1_CAEEL1.421e-2156.10Protein yippee-like F37A8.5 OS=Caenorhabditis eleg... [more]
YIPL_ORYSJ1.330e-1948.15Putative yippee-like protein Os10g0369500 OS=Oryza... [more]
YIPP_DROME2.509e-1844.68Protein yippee OS=Drosophila melanogaster GN=Yippe... [more]
YPEL5_PONAB1.798e-1642.55Protein yippee-like 5 OS=Pongo abelii GN=YPEL5 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617516 ID=DN617516; Name=DN617516; organism=Citrus sinensis; type=EST; length=444bp
CTTTCTCAAGCATCTCCCTTTTATTAAATTTTCTTTATTTTCAAGTAATT
TTCTTTTTGTTTGTTTTCAATGATTCATTCAACCACCACCGTCTTGTTTG
ATTTTTGATTTTGTGTGTATTTTTTTCCTGCAAAGATCTGTTGGTAGAGT
AGTGTGAAGAATTATGGGGAGGCTATTTGTGGTGAATCTTGAAGGGAAGA
TCTATAGCTGCAAGCACTGCAGGACCCATCTTGCTTTATGTGAAGACGTC
GTCTCTAAGTCTTTCCATTGCAGGCATGGGAAAGCTTATCTCTTCAGTAA
GGTTGTGAATGTTTCTGTTGGAGAGAAAGAGGAGAGATTGATGATGACTG
GGATGCATACAGTGGCTGACATTTTCTGTGTTGGGTGTGGATCAATTGTC
GGTTGGAAATACGAGACTGCCCATGAAAAGAGCCAAAAGTACAA
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